Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_K16
         (890 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    26   0.53 
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    26   0.53 
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    25   0.70 
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      24   2.1  
DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    22   6.5  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    22   6.5  

>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 25.8 bits (54), Expect = 0.53
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = +3

Query: 627 MPLTNLPKFPPGNHHQQMLNQEVDXRKESSLNSLML 734
           MP + +P + PGNH Q  L       K   + ++ L
Sbjct: 334 MPPSGIPNWVPGNHDQLRLVSRFGEEKARMITTMSL 369


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 25.8 bits (54), Expect = 0.53
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = +3

Query: 627 MPLTNLPKFPPGNHHQQMLNQEVDXRKESSLNSLML 734
           MP + +P + PGNH Q  L       K   + ++ L
Sbjct: 334 MPPSGIPNWVPGNHDQLRLVSRFGEEKARMITTMSL 369


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 25.4 bits (53), Expect = 0.70
 Identities = 16/74 (21%), Positives = 35/74 (47%)
 Frame = +2

Query: 209 SAKEIDIVWENESVIILPNSTKPVPFGTSNDLIRILENAFNKSVSPLEKVTMNHWLSFSL 388
           S+  +++ W N+S   + +++   P G S+       ++F  SVSP    + N+     L
Sbjct: 60  SSGGVELGWFNDSAAAITSTSPSYPGGGSSSPSPSSPSSFFSSVSPTSLGSENYTGISDL 119

Query: 389 ILEDEIPKSVEYLD 430
            + D++   +  L+
Sbjct: 120 FVFDDLNDYINRLN 133


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
 Frame = +2

Query: 521 FKEISKLIPSQNIR---RWMKLVEAQPQVQTVIKALPSDALDKLTKVSSRK 664
           F+EI       N+R   R   L EA   ++ +I  LPSD   KL+K+ + K
Sbjct: 248 FEEIQNQRVMANVRERQRTQSLNEAFAALRKIIPTLPSD---KLSKIQTLK 295


>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -1

Query: 710 FLPVVYLLIQHLLVVISWRKLW 645
           F  + Y +   L+VVISW   W
Sbjct: 233 FFMMDYYIPSILIVVISWVSFW 254


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +2

Query: 302 LIRILENAFNKSVSPLEKVTMNHWLSFSL 388
           L+R L   +NK + P++ +T    ++F L
Sbjct: 30  LVRDLFRGYNKLIRPVQNMTEKVHVNFGL 58


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 224,811
Number of Sequences: 438
Number of extensions: 4498
Number of successful extensions: 16
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28783482
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)