Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_K11
         (872 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 vari...    40   3e-05
DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 vari...    40   3e-05
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    25   1.2  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                25   1.2  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   8.5  

>DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 variant
           2 precursor protein.
          Length = 94

 Score = 39.9 bits (89), Expect = 3e-05
 Identities = 21/61 (34%), Positives = 28/61 (45%)
 Frame = +1

Query: 328 CSENEIYVKCVQAQCSPMTCSKKDGPKICPLVEEKSCKAGCVCKEGYLKDDSGKCVAREN 507
           C  NEI+ +C   +C    C       +C     K C  GCVC+ GYL++    CV R  
Sbjct: 37  CPSNEIFSRC-DGRCQRF-CPNVVPKPLCI----KICAPGCVCRLGYLRNKKKVCVPRSK 90

Query: 508 C 510
           C
Sbjct: 91  C 91



 Score = 39.5 bits (88), Expect = 4e-05
 Identities = 22/61 (36%), Positives = 30/61 (49%)
 Frame = +1

Query: 130 CSENEIYVKCVQAHCGPRTCSEKDLPMPCPLVRQEYCKAGCLCKEGYLKDDSGKCVAREN 309
           C  NEI+ +C    C  R C      +P PL  +  C  GC+C+ GYL++    CV R  
Sbjct: 37  CPSNEIFSRC-DGRC-QRFCPNV---VPKPLCIK-ICAPGCVCRLGYLRNKKKVCVPRSK 90

Query: 310 C 312
           C
Sbjct: 91  C 91



 Score = 35.5 bits (78), Expect = 6e-04
 Identities = 20/58 (34%), Positives = 26/58 (44%)
 Frame = +1

Query: 526 CSENEIYVNCVQAQCSPMTCSKKDGPKICPLVEEKSCKAGCVCKEGYLKDDSGKCVAR 699
           C  NEI+  C   +C    C       +C     K C  GCVC+ GYL++    CV R
Sbjct: 37  CPSNEIFSRC-DGRCQRF-CPNVVPKPLCI----KICAPGCVCRLGYLRNKKKVCVPR 88


>DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 variant
           1 precursor protein.
          Length = 92

 Score = 39.9 bits (89), Expect = 3e-05
 Identities = 21/61 (34%), Positives = 28/61 (45%)
 Frame = +1

Query: 328 CSENEIYVKCVQAQCSPMTCSKKDGPKICPLVEEKSCKAGCVCKEGYLKDDSGKCVAREN 507
           C  NEI+ +C   +C    C       +C     K C  GCVC+ GYL++    CV R  
Sbjct: 37  CPSNEIFSRC-DGRCQRF-CPNVVPKPLCI----KICAPGCVCRLGYLRNKKKVCVPRSK 90

Query: 508 C 510
           C
Sbjct: 91  C 91



 Score = 39.5 bits (88), Expect = 4e-05
 Identities = 22/61 (36%), Positives = 30/61 (49%)
 Frame = +1

Query: 130 CSENEIYVKCVQAHCGPRTCSEKDLPMPCPLVRQEYCKAGCLCKEGYLKDDSGKCVAREN 309
           C  NEI+ +C    C  R C      +P PL  +  C  GC+C+ GYL++    CV R  
Sbjct: 37  CPSNEIFSRC-DGRC-QRFCPNV---VPKPLCIK-ICAPGCVCRLGYLRNKKKVCVPRSK 90

Query: 310 C 312
           C
Sbjct: 91  C 91



 Score = 35.5 bits (78), Expect = 6e-04
 Identities = 20/58 (34%), Positives = 26/58 (44%)
 Frame = +1

Query: 526 CSENEIYVNCVQAQCSPMTCSKKDGPKICPLVEEKSCKAGCVCKEGYLKDDSGKCVAR 699
           C  NEI+  C   +C    C       +C     K C  GCVC+ GYL++    CV R
Sbjct: 37  CPSNEIFSRC-DGRCQRF-CPNVVPKPLCI----KICAPGCVCRLGYLRNKKKVCVPR 88


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 17/60 (28%), Positives = 25/60 (41%)
 Frame = -1

Query: 368 CAWTHFTYISFSEQRSEFGQFSRATHLPLSSFRYPSLHRHPALQYSCLTNGQGIGKSFSE 189
           C+ T   Y S  +  S+     R+THL +S        R P+ + SC +   G   S  E
Sbjct: 365 CSQTSVHY-SNGQTHSQLCPTPRSTHLKVSGINRVGSTRRPSRRNSCESQMMGDEMSLRE 423


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 17/58 (29%), Positives = 24/58 (41%)
 Frame = -2

Query: 586 STSLGCTVLGHSSHIFHFQSRGQNLGSFLGRHIYRYRLSDIPLYTRIRLCRTFPPPMG 413
           +TS G  +L H     H Q  G  + +  GRH+  +     P YT   +  T  P  G
Sbjct: 183 TTSTGTRLL-HGILSQHPQQHGLGVQNGYGRHLPGHAQMGRPSYTTATMATTSTPGSG 239



 Score = 24.2 bits (50), Expect = 1.6
 Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
 Frame = -2

Query: 388 STSLGCTVL-GHISRIFHFQSRGQNLGSFLGRHIYRYRLSDIPLYTGIRLCSTLASPMGR 212
           +TS G  +L G +S+  H Q  G  + +  GRH+  +     P YT   + +T     G 
Sbjct: 183 TTSTGTRLLHGILSQ--HPQQHGLGVQNGYGRHLPGHAQMGRPSYTTATMATTSTPGSGS 240

Query: 211 A*VSPS 194
              SP+
Sbjct: 241 LPASPA 246


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.8 bits (44), Expect = 8.5
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = +1

Query: 643 GCVCKEGYLKDDSGKCVARENXPNCNLVKF 732
           GC CK GY  D     V ++    C + KF
Sbjct: 246 GCHCKPGYQAD-----VEKQECTECPIGKF 270


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 246,305
Number of Sequences: 438
Number of extensions: 6061
Number of successful extensions: 17
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28280841
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)