Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP27_F_K05
(967 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0553 - 4067921-4068180,4068437-4068455,4069101-4070225 33 0.34
08_02_1310 - 26037025-26038074 27 0.82
06_01_1181 + 10148653-10149405 31 1.0
02_05_0962 + 33114226-33114684,33114806-33114853,33115166-331152... 31 1.4
02_04_0180 + 20696258-20698398,20698691-20698871,20698998-20699060 31 1.4
01_01_0401 + 3043634-3043894,3045610-3045849 31 1.4
12_02_0299 - 17051570-17052474,17053542-17053755 25 1.8
05_01_0120 - 828834-831143 31 1.8
02_05_0686 - 30900748-30902167,30903442-30904742 31 1.8
06_03_1381 - 29754405-29754525,29754617-29754671,29755383-297554... 30 2.4
08_02_0226 - 14480461-14481199,14481399-14482243 30 3.2
01_01_0892 + 7037384-7037795,7038447-7038962,7039507-7039593,703... 30 3.2
10_03_0012 - 7037088-7037282,7037453-7037954,7038079-7038081,704... 29 4.2
07_03_1691 - 28726307-28726323,28726588-28726953,28727483-287275... 29 4.2
06_03_0082 + 16363742-16364632 29 4.2
04_03_0964 - 21290107-21290667,21290780-21291130,21291230-212914... 29 4.2
03_03_0038 + 13984525-13984917,13985351-13985429,13985535-139856... 25 5.3
09_06_0020 - 20267190-20267612,20269086-20269495,20269573-202697... 29 7.3
01_06_0811 + 32158698-32159054 29 7.3
01_01_0083 + 631196-631675 29 7.3
07_03_1788 + 29523216-29524867,29525048-29525075 25 8.2
08_01_0420 + 3726392-3727116,3727450-3727648,3727787-3727879,372... 26 8.2
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 28 9.7
09_04_0295 - 16454862-16455035,16455122-16455264,16455393-164559... 28 9.7
09_02_0495 + 9880714-9881196 28 9.7
08_02_1204 - 25267546-25268219,25268319-25268452,25269567-252696... 28 9.7
08_02_1049 + 23944526-23945473 28 9.7
06_02_0257 - 13533689-13533714,13533799-13533925,13534013-135341... 28 9.7
04_03_0803 - 19835284-19836050,19836337-19836418 28 9.7
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 28 9.7
03_06_0758 - 36052261-36052301,36052463-36052697,36052895-360529... 28 9.7
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863... 28 9.7
02_02_0240 + 8196140-8198248,8198381-8198650 28 9.7
>01_01_0553 - 4067921-4068180,4068437-4068455,4069101-4070225
Length = 467
Score = 33.1 bits (72), Expect = 0.34
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -2
Query: 936 GGGGGGXXFXFXXXXPPPPPPP 871
GGGGGG F PPPPP P
Sbjct: 21 GGGGGGGGFSPTAAKPPPPPSP 42
Score = 31.9 bits (69), Expect = 0.79
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = +2
Query: 872 GGGGGGGXXXKKXKXXPPPPP 934
GGGGGGG PPPPP
Sbjct: 20 GGGGGGGGGFSPTAAKPPPPP 40
Score = 31.1 bits (67), Expect = 1.4
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +2
Query: 872 GGGGGGGXXXKKXKXXPPPPPP 937
GGGGGGG PPPP P
Sbjct: 21 GGGGGGGGFSPTAAKPPPPPSP 42
Score = 28.7 bits (61), Expect = 7.3
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +1
Query: 874 GGGGGGGXXXKXKXXXPPXPP 936
GGGGGGG PP PP
Sbjct: 20 GGGGGGGGGFSPTAAKPPPPP 40
>08_02_1310 - 26037025-26038074
Length = 349
Score = 26.6 bits (56), Expect(2) = 0.82
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -1
Query: 766 PPPPXXGGGGG 734
PPPP GGGGG
Sbjct: 155 PPPPSSGGGGG 165
Score = 24.6 bits (51), Expect(2) = 3.0
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -3
Query: 764 PPPXXGGGGGXV 729
PPP GGGGG +
Sbjct: 156 PPPSSGGGGGHI 167
Score = 23.8 bits (49), Expect(2) = 3.0
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -3
Query: 893 PPPPPPP 873
PPPPPPP
Sbjct: 152 PPPPPPP 158
Score = 23.8 bits (49), Expect(2) = 0.82
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1
Query: 892 PPPPPPP 872
PPPPPPP
Sbjct: 152 PPPPPPP 158
>06_01_1181 + 10148653-10149405
Length = 250
Score = 31.5 bits (68), Expect = 1.0
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 936 GGGGGGXXFXFXXXXPPPPPPPXXXXF 856
GGGGG PPPPPPP F
Sbjct: 129 GGGGGRGAAAAPAVVPPPPPPPPEDAF 155
Score = 31.1 bits (67), Expect = 1.4
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +2
Query: 872 GGGGGGGXXXKKXKXXPPPPPP 937
GGGGGG PPPPPP
Sbjct: 128 GGGGGGRGAAAAPAVVPPPPPP 149
Score = 30.7 bits (66), Expect = 1.8
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +2
Query: 872 GGGGGGGXXXKKXKXXPPPPPP 937
GGGGGGG PPPPP
Sbjct: 127 GGGGGGGRGAAAAPAVVPPPPP 148
Score = 30.7 bits (66), Expect = 1.8
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +2
Query: 872 GGGGGGGXXXKKXKXXPPPPPP 937
GGGGG G PPPPPP
Sbjct: 129 GGGGGRGAAAAPAVVPPPPPPP 150
Score = 30.3 bits (65), Expect = 2.4
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -2
Query: 936 GGGGGGXXFXFXXXXPPPPPPP 871
GGGGGG PPPPPP
Sbjct: 128 GGGGGGRGAAAAPAVVPPPPPP 149
Score = 28.3 bits (60), Expect = 9.7
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 872 GGGGGGGXXXKKXKXXPPPPPP 937
GGGG G PPPPPP
Sbjct: 130 GGGGRGAAAAPAVVPPPPPPPP 151
>02_05_0962 +
33114226-33114684,33114806-33114853,33115166-33115286,
33115760-33116008,33116149-33116302,33116493-33116985,
33117524-33117596,33118285-33118343
Length = 551
Score = 31.1 bits (67), Expect = 1.4
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -2
Query: 936 GGGGGGXXFXFXXXXPPPPP 877
GGGGGG F PPPPP
Sbjct: 53 GGGGGGGGFLRLRSAPPPPP 72
Score = 31.1 bits (67), Expect = 1.4
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +2
Query: 875 GGGGGGXXXKKXKXXPPPPP 934
GGGGGG + + PPPPP
Sbjct: 53 GGGGGGGGFLRLRSAPPPPP 72
Score = 29.9 bits (64), Expect = 3.2
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 872 GGGGGGGXXXKKXKXXPPPP 931
GGGGGGG + PPPP
Sbjct: 53 GGGGGGGGFLRLRSAPPPPP 72
Score = 28.7 bits (61), Expect = 7.3
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2
Query: 936 GGGGGGXXFXFXXXXPPPPPPP 871
GGGGGG PPPP P
Sbjct: 54 GGGGGGGFLRLRSAPPPPPSRP 75
>02_04_0180 + 20696258-20698398,20698691-20698871,20698998-20699060
Length = 794
Score = 31.1 bits (67), Expect = 1.4
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +2
Query: 872 GGGGGGGXXXKKXKXXPPPPPPXXXXQK 955
GGGG G K PPPPPP Q+
Sbjct: 22 GGGGAGYPRGHKQLYAPPPPPPPQHQQQ 49
Score = 29.1 bits (62), Expect = 5.5
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +2
Query: 872 GGGGGGGXXXKKXKXXPPPPPPXXXXQK 955
GGG G K+ PPPPPP Q+
Sbjct: 23 GGGAGYPRGHKQLYAPPPPPPPQHQQQR 50
Score = 28.3 bits (60), Expect = 9.7
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2
Query: 936 GGGGGGXXFXFXXXXPPPPPPP 871
GGGG G PPPPPP
Sbjct: 22 GGGGAGYPRGHKQLYAPPPPPP 43
>01_01_0401 + 3043634-3043894,3045610-3045849
Length = 166
Score = 31.1 bits (67), Expect = 1.4
Identities = 14/22 (63%), Positives = 14/22 (63%)
Frame = +2
Query: 872 GGGGGGGXXXKKXKXXPPPPPP 937
GGGGGGG KK PPP PP
Sbjct: 21 GGGGGGG---KKLHQSPPPSPP 39
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 24.6 bits (51), Expect(2) = 1.8
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -2
Query: 906 FXXXXPPPPPPP 871
F PPPPPPP
Sbjct: 284 FSPPSPPPPPPP 295
Score = 24.6 bits (51), Expect(2) = 1.8
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -2
Query: 891 PPPPPPPXXXXF 856
PPPPPPP F
Sbjct: 323 PPPPPPPPPPSF 334
>05_01_0120 - 828834-831143
Length = 769
Score = 30.7 bits (66), Expect = 1.8
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 872 GGGGGGGXXXKKXKXXPPPPP 934
G GGGGG + + PPPPP
Sbjct: 40 GAGGGGGAGAGQARRIPPPPP 60
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 30.7 bits (66), Expect = 1.8
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = +3
Query: 657 PPPPPXXXXXXXXXXXGXXKXGXXNXPPPPPXXGG 761
PPPPP G K G PPPPP GG
Sbjct: 355 PPPPPKGPSPPPPPPPGGKKGG----PPPPPPKGG 385
Score = 30.7 bits (66), Expect = 1.8
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = +1
Query: 658 PPPPPXXXXXXXXXXXGXXKXGXXTXPPPPPXXGG 762
PPPPP G K G PPPPP GG
Sbjct: 355 PPPPPKGPSPPPPPPPGGKKGG----PPPPPPKGG 385
>06_03_1381 -
29754405-29754525,29754617-29754671,29755383-29755440,
29755819-29755988,29756576-29756780
Length = 202
Score = 30.3 bits (65), Expect = 2.4
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 875 GGGGGGXXXKKXKXXPPPPP 934
GGGGGG + PPPPP
Sbjct: 6 GGGGGGAGEARGADAPPPPP 25
>08_02_0226 - 14480461-14481199,14481399-14482243
Length = 527
Score = 29.9 bits (64), Expect = 3.2
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +2
Query: 872 GGGGGGGXXXKKXKXXPPPPPP 937
GGGGGGG K PPPP
Sbjct: 424 GGGGGGGALPSKIHVNIEPPPP 445
Score = 29.9 bits (64), Expect = 3.2
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +2
Query: 872 GGGGGGGXXXKKXKXXPPPPPP 937
GGGGGG K PPPPP
Sbjct: 425 GGGGGGALPSKIHVNIEPPPPP 446
>01_01_0892 +
7037384-7037795,7038447-7038962,7039507-7039593,
7039698-7039768,7040148-7040224,7040380-7040527,
7040973-7041134,7041374-7041694
Length = 597
Score = 29.9 bits (64), Expect = 3.2
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = +3
Query: 657 PPPPPXXXXXXXXXXXGXXKXGXXNXPPPPP 749
PPPPP G + N PPPPP
Sbjct: 127 PPPPPPPPPFKGDHYGGVYQNWQQNGPPPPP 157
>10_03_0012 -
7037088-7037282,7037453-7037954,7038079-7038081,
7040633-7041213
Length = 426
Score = 29.5 bits (63), Expect = 4.2
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +1
Query: 652 FSPPPPPXXXXXXXXXXXGXXKXGXXTXPPPPP 750
F PPPPP + G PPPPP
Sbjct: 72 FYPPPPPSMPGPLPAPYDHHHRGGGPAQPPPPP 104
Score = 29.1 bits (62), Expect = 5.5
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +3
Query: 651 FLPPPPPXXXXXXXXXXXGXXKXGXXNXPPPPP 749
F PPPPP + G PPPPP
Sbjct: 72 FYPPPPPSMPGPLPAPYDHHHRGGGPAQPPPPP 104
>07_03_1691 -
28726307-28726323,28726588-28726953,28727483-28727567,
28728255-28728387,28729793-28730328
Length = 378
Score = 29.5 bits (63), Expect = 4.2
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -2
Query: 936 GGGGGGXXFXFXXXXPPPPPPP 871
GGGGGG PPPPPPP
Sbjct: 34 GGGGGGAG----PTPPPPPPPP 51
>06_03_0082 + 16363742-16364632
Length = 296
Score = 29.5 bits (63), Expect = 4.2
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -2
Query: 927 GGGXXFXFXXXXPPPPPPP 871
GGG F PPPPPPP
Sbjct: 157 GGGDQFGGGEERPPPPPPP 175
>04_03_0964 -
21290107-21290667,21290780-21291130,21291230-21291411,
21291505-21291631,21291956-21292168,21292627-21292755,
21292891-21293616
Length = 762
Score = 29.5 bits (63), Expect = 4.2
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +2
Query: 878 GGGGGXXXKKXKXXPPPPP 934
GGGGG + + PPPPP
Sbjct: 17 GGGGGEGTRSGRKKPPPPP 35
>03_03_0038 +
13984525-13984917,13985351-13985429,13985535-13985628,
13985712-13985844
Length = 232
Score = 25.4 bits (53), Expect(2) = 5.3
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = +2
Query: 875 GGGGGGXXXKKXKXXPPPPPP 937
GGG ++ + PPPPPP
Sbjct: 23 GGGRRKKAGRRGEAKPPPPPP 43
Score = 22.2 bits (45), Expect(2) = 5.3
Identities = 7/12 (58%), Positives = 8/12 (66%)
Frame = +2
Query: 920 PPPPPPXXXXQK 955
PPPPPP +K
Sbjct: 80 PPPPPPPPKQEK 91
>09_06_0020 -
20267190-20267612,20269086-20269495,20269573-20269747,
20270833-20271066,20271164-20271265,20271354-20272091,
20272204-20272321,20272417-20272667,20272768-20272932
Length = 871
Score = 28.7 bits (61), Expect = 7.3
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +2
Query: 872 GGGGGGGXXXKKXKXXPPPPPP 937
GGGGGGG + PP P P
Sbjct: 21 GGGGGGGVHNSRLLPTPPVPKP 42
>01_06_0811 + 32158698-32159054
Length = 118
Score = 28.7 bits (61), Expect = 7.3
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 875 GGGGGGXXXKKXKXXPPPPP 934
GGGGGG K + P PPP
Sbjct: 72 GGGGGGVGVGKRRRVPMPPP 91
>01_01_0083 + 631196-631675
Length = 159
Score = 28.7 bits (61), Expect = 7.3
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -2
Query: 954 FWXXXXGGGGGGXXFXFXXXXPPPPPP 874
++ GGGGGG F + PPPP P
Sbjct: 90 YYQPPAGGGGGGGGFNYPA--PPPPNP 114
>07_03_1788 + 29523216-29524867,29525048-29525075
Length = 559
Score = 25.4 bits (53), Expect(2) = 8.2
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +2
Query: 911 KXXPPPPPPXXXXQKXPP 964
K PPPPPP PP
Sbjct: 28 KNPPPPPPPATDPNPHPP 45
Score = 21.4 bits (43), Expect(2) = 8.2
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +2
Query: 905 KXKXXPPPPPP 937
+ + PPPPPP
Sbjct: 25 RPRKNPPPPPP 35
>08_01_0420 +
3726392-3727116,3727450-3727648,3727787-3727879,
3728001-3728129,3728445-3728498,3728597-3728674,
3728773-3728835,3729101-3729213,3729392-3729500
Length = 520
Score = 25.8 bits (54), Expect(2) = 8.2
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +2
Query: 872 GGGGGGGXXXKKXKXXPPPP 931
GGGGGGG PP P
Sbjct: 39 GGGGGGGGGGDAMSFAPPAP 58
Score = 21.0 bits (42), Expect(2) = 8.2
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +2
Query: 920 PPPPPP 937
PPPPPP
Sbjct: 97 PPPPPP 102
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 28.3 bits (60), Expect = 9.7
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +1
Query: 652 FSPPPPPXXXXXXXXXXXGXXKXGXXTXPPPPP 750
FSPPPPP PPPPP
Sbjct: 561 FSPPPPPPPPPPPPLPQSNYASSQPPPPPPPPP 593
Score = 25.0 bits (52), Expect(2) = 9.9
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +2
Query: 920 PPPPPPXXXXQKXPP 964
PPPPPP + PP
Sbjct: 605 PPPPPPILPNRSVPP 619
Score = 21.4 bits (43), Expect(2) = 9.9
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +2
Query: 905 KXKXXPPPPPP 937
K PPPPPP
Sbjct: 558 KPAFSPPPPPP 568
>09_04_0295 -
16454862-16455035,16455122-16455264,16455393-16455939,
16456006-16456332
Length = 396
Score = 28.3 bits (60), Expect = 9.7
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 872 GGGGGGGXXXKKXKXXPPPPPP 937
GG GGG ++ + PPPPP
Sbjct: 204 GGDGGGRSRERRRQPSSPPPPP 225
Score = 28.3 bits (60), Expect = 9.7
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +2
Query: 872 GGGGGGGXXXKKXKXXPPPPPP 937
G GGG ++ PPPPPP
Sbjct: 205 GDGGGRSRERRRQPSSPPPPPP 226
>09_02_0495 + 9880714-9881196
Length = 160
Score = 28.3 bits (60), Expect = 9.7
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -2
Query: 936 GGGGGGXXFXFXXXXPPPPP 877
GGG GG F PPPPP
Sbjct: 65 GGGDGGAGGLFGGTYPPPPP 84
>08_02_1204 -
25267546-25268219,25268319-25268452,25269567-25269661,
25270289-25270304,25270635-25270684,25270960-25271331
Length = 446
Score = 28.3 bits (60), Expect = 9.7
Identities = 14/29 (48%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Frame = +2
Query: 872 GGGGGGGXXXKKX--KXXPPPPPPXXXXQ 952
GG GGGG K PPPPPP Q
Sbjct: 77 GGRGGGGKNKGKGVAAAAPPPPPPPPRCQ 105
Score = 28.3 bits (60), Expect = 9.7
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2
Query: 936 GGGGGGXXFXFXXXXPPPPPPP 871
GGGG PPPPPPP
Sbjct: 80 GGGGKNKGKGVAAAAPPPPPPP 101
>08_02_1049 + 23944526-23945473
Length = 315
Score = 28.3 bits (60), Expect = 9.7
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -2
Query: 933 GGGGGXXFXFXXXXPPPPPPP 871
GGGGG F PP PPP
Sbjct: 176 GGGGGGFSGFAPRPPPQQPPP 196
>06_02_0257 -
13533689-13533714,13533799-13533925,13534013-13534121,
13534193-13534272,13534758-13534979,13536070-13536318,
13537032-13537484,13539834-13540556
Length = 662
Score = 28.3 bits (60), Expect = 9.7
Identities = 13/25 (52%), Positives = 13/25 (52%), Gaps = 3/25 (12%)
Frame = +2
Query: 872 GGGGG---GGXXXKKXKXXPPPPPP 937
GGGGG GG PPPPPP
Sbjct: 45 GGGGGDRRGGFQLPPDAAPPPPPPP 69
>04_03_0803 - 19835284-19836050,19836337-19836418
Length = 282
Score = 28.3 bits (60), Expect = 9.7
Identities = 15/39 (38%), Positives = 15/39 (38%), Gaps = 2/39 (5%)
Frame = +3
Query: 657 PPPPPXXXXXXXXXXXGXXKXGXX--NXPPPPPXXGGGG 767
PPPPP G G N PPPPP GG
Sbjct: 198 PPPPPSRCGGCDHADCGGWCGGQPPINCPPPPPPSRCGG 236
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 28.3 bits (60), Expect = 9.7
Identities = 14/39 (35%), Positives = 15/39 (38%), Gaps = 1/39 (2%)
Frame = +3
Query: 654 LPPPPPXXXXXXXXXXXGXX-KXGXXNXPPPPPXXGGGG 767
+PPPPP G PPPPP G GG
Sbjct: 1121 VPPPPPIGGLGGHQAPPAPPLPEGIGGVPPPPPVGGLGG 1159
>03_06_0758 -
36052261-36052301,36052463-36052697,36052895-36052966,
36056477-36056567,36056650-36056872,36056964-36057300,
36057406-36057588
Length = 393
Score = 28.3 bits (60), Expect = 9.7
Identities = 16/41 (39%), Positives = 17/41 (41%), Gaps = 9/41 (21%)
Frame = -2
Query: 966 RGGXFWXXXXGGGGGGXXFXFXXXX---------PPPPPPP 871
R G F GGGGGG + PPPPPPP
Sbjct: 108 RRGSFGGRRRGGGGGGFDALYRAPIGPYVRGATAPPPPPPP 148
>03_02_0455 -
8630543-8630893,8630994-8631068,8631149-8631223,
8631332-8631397,8631891-8631967,8632659-8633070
Length = 351
Score = 28.3 bits (60), Expect = 9.7
Identities = 12/37 (32%), Positives = 13/37 (35%)
Frame = +1
Query: 655 SPPPPPXXXXXXXXXXXGXXKXGXXTXPPPPPXXGGG 765
+PPPPP G PPPPP G
Sbjct: 279 APPPPPPNAPMGMPPRIPPPPVGGTQPPPPPPPLANG 315
Score = 28.3 bits (60), Expect = 9.7
Identities = 12/36 (33%), Positives = 12/36 (33%)
Frame = +3
Query: 657 PPPPPXXXXXXXXXXXGXXKXGXXNXPPPPPXXGGG 764
PPPPP G PPPPP G
Sbjct: 280 PPPPPPNAPMGMPPRIPPPPVGGTQPPPPPPPLANG 315
>02_02_0240 + 8196140-8198248,8198381-8198650
Length = 792
Score = 28.3 bits (60), Expect = 9.7
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +3
Query: 657 PPPPPXXXXXXXXXXXGXXKXGXXNXPPPPP 749
PPPPP G N PPPPP
Sbjct: 594 PPPPPIPGQPQVIRMPGSMGPMPTNIPPPPP 624
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,471,432
Number of Sequences: 37544
Number of extensions: 651991
Number of successful extensions: 30159
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 3101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16937
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2799822860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -