Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP27_F_K05
(967 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC105925-1|AAI05926.1| 562|Homo sapiens CPEB2 protein protein. 34 0.89
BC103941-1|AAI03942.1| 568|Homo sapiens CPEB2 protein protein. 34 0.89
BC103940-1|AAI03941.1| 589|Homo sapiens cytoplasmic polyadenyla... 34 0.89
AY255519-1|AAP41553.1| 559|Homo sapiens cytoplasmic polyadenyla... 34 0.89
AY247744-1|AAP37585.1| 589|Homo sapiens cytoplasmic polyadenyla... 34 0.89
DQ067453-1|AAZ23040.1| 1262|Homo sapiens diaphanous-1 protein. 33 2.1
DQ067452-1|AAZ23039.1| 229|Homo sapiens diaphanous-1 protein. 33 2.1
BC117257-1|AAI17258.1| 1262|Homo sapiens diaphanous homolog 1 (D... 33 2.1
AY363395-1|AAQ63049.1| 1272|Homo sapiens diaphanous 1 protein. 33 2.1
AY360322-1|AAQ64023.1| 179|Homo sapiens diaphanous 1 protein. 33 2.1
AF051782-1|AAC05373.1| 1248|Homo sapiens diaphanous 1 protein. 33 2.1
AB209482-1|BAD92719.1| 1299|Homo sapiens Diaphanous 1 variant pr... 33 2.1
U80017-3|AAC52048.1| 294|Homo sapiens survival motor neuron pro... 32 2.7
U43883-1|AAC50473.1| 294|Homo sapiens survival motor neuron pro... 32 2.7
U21914-1|AAA64505.1| 293|Homo sapiens U18423; it is not known i... 32 2.7
U18423-1|AAA66242.1| 294|Homo sapiens spinal muscular atrophy d... 32 2.7
BC070242-1|AAH70242.1| 282|Homo sapiens survival of motor neuro... 32 2.7
BC062723-1|AAH62723.1| 294|Homo sapiens survival of motor neuro... 32 2.7
BC015308-1|AAH15308.1| 294|Homo sapiens survival of motor neuro... 32 2.7
BC000908-1|AAH00908.1| 282|Homo sapiens SMN1 protein protein. 32 2.7
AC005031-2|AAC62262.1| 294|Homo sapiens survival of motor neuro... 32 2.7
AC004999-1|AAC83178.1| 294|Homo sapiens survival motor neuron 1... 32 2.7
AF199414-1|AAF86048.1| 648|Homo sapiens RNA helicase A binding ... 27 3.6
DQ854815-1|ABI75145.1| 112|Homo sapiens hyperpolarization-activ... 31 8.3
AJ133727-1|CAB42630.1| 889|Homo sapiens hyperpolarization-activ... 31 8.3
AJ012582-1|CAB42602.1| 889|Homo sapiens hyperpolarization-activ... 31 8.3
AC005559-2|AAC33280.2| 528|Homo sapiens hyperpolarization activ... 31 8.3
>BC105925-1|AAI05926.1| 562|Homo sapiens CPEB2 protein protein.
Length = 562
Score = 33.9 bits (74), Expect = 0.89
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +2
Query: 872 GGGGGGGXXXKKXKXXPPPPPPXXXXQKXPP 964
GGGGG G PPPPP Q+ PP
Sbjct: 46 GGGGGFGGPFSATAVPPPPPPAMNIPQQQPP 76
Score = 33.1 bits (72), Expect = 1.6
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -2
Query: 936 GGGGGGXXFXFXXXXPPPPPPP 871
GGGGGG F PPPPPP
Sbjct: 45 GGGGGGFGGPFSATAVPPPPPP 66
>BC103941-1|AAI03942.1| 568|Homo sapiens CPEB2 protein protein.
Length = 568
Score = 33.9 bits (74), Expect = 0.89
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +2
Query: 872 GGGGGGGXXXKKXKXXPPPPPPXXXXQKXPP 964
GGGGG G PPPPP Q+ PP
Sbjct: 47 GGGGGFGGPFSATAVPPPPPPAMNIPQQQPP 77
Score = 33.1 bits (72), Expect = 1.6
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -2
Query: 936 GGGGGGXXFXFXXXXPPPPPPP 871
GGGGGG F PPPPPP
Sbjct: 46 GGGGGGFGGPFSATAVPPPPPP 67
>BC103940-1|AAI03941.1| 589|Homo sapiens cytoplasmic
polyadenylation element binding protein 2 protein.
Length = 589
Score = 33.9 bits (74), Expect = 0.89
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +2
Query: 872 GGGGGGGXXXKKXKXXPPPPPPXXXXQKXPP 964
GGGGG G PPPPP Q+ PP
Sbjct: 46 GGGGGFGGPFSATAVPPPPPPAMNIPQQQPP 76
Score = 33.1 bits (72), Expect = 1.6
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -2
Query: 936 GGGGGGXXFXFXXXXPPPPPPP 871
GGGGGG F PPPPPP
Sbjct: 45 GGGGGGFGGPFSATAVPPPPPP 66
>AY255519-1|AAP41553.1| 559|Homo sapiens cytoplasmic
polyadenylation element binding protein CPEB2b protein.
Length = 559
Score = 33.9 bits (74), Expect = 0.89
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +2
Query: 872 GGGGGGGXXXKKXKXXPPPPPPXXXXQKXPP 964
GGGGG G PPPPP Q+ PP
Sbjct: 46 GGGGGFGGPFSATAVPPPPPPAMNIPQQQPP 76
Score = 33.1 bits (72), Expect = 1.6
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -2
Query: 936 GGGGGGXXFXFXXXXPPPPPPP 871
GGGGGG F PPPPPP
Sbjct: 45 GGGGGGFGGPFSATAVPPPPPP 66
>AY247744-1|AAP37585.1| 589|Homo sapiens cytoplasmic
polyadenylation element binding protein CPEB2 protein.
Length = 589
Score = 33.9 bits (74), Expect = 0.89
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +2
Query: 872 GGGGGGGXXXKKXKXXPPPPPPXXXXQKXPP 964
GGGGG G PPPPP Q+ PP
Sbjct: 46 GGGGGFGGPFSATAVPPPPPPAMNIPQQQPP 76
Score = 33.1 bits (72), Expect = 1.6
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -2
Query: 936 GGGGGGXXFXFXXXXPPPPPPP 871
GGGGGG F PPPPPP
Sbjct: 45 GGGGGGFGGPFSATAVPPPPPP 66
>DQ067453-1|AAZ23040.1| 1262|Homo sapiens diaphanous-1 protein.
Length = 1262
Score = 32.7 bits (71), Expect = 2.1
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +3
Query: 654 LPPPPPXXXXXXXXXXXGXXKXGXXNXPPPPPXXGGGG 767
+PPPPP G PPPPP GG G
Sbjct: 690 IPPPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPG 727
>DQ067452-1|AAZ23039.1| 229|Homo sapiens diaphanous-1 protein.
Length = 229
Score = 32.7 bits (71), Expect = 2.1
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +3
Query: 654 LPPPPPXXXXXXXXXXXGXXKXGXXNXPPPPPXXGGGG 767
+PPPPP G PPPPP GG G
Sbjct: 84 IPPPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPG 121
>BC117257-1|AAI17258.1| 1262|Homo sapiens diaphanous homolog 1
(Drosophila) protein.
Length = 1262
Score = 32.7 bits (71), Expect = 2.1
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +3
Query: 654 LPPPPPXXXXXXXXXXXGXXKXGXXNXPPPPPXXGGGG 767
+PPPPP G PPPPP GG G
Sbjct: 690 IPPPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPG 727
>AY363395-1|AAQ63049.1| 1272|Homo sapiens diaphanous 1 protein.
Length = 1272
Score = 32.7 bits (71), Expect = 2.1
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +3
Query: 654 LPPPPPXXXXXXXXXXXGXXKXGXXNXPPPPPXXGGGG 767
+PPPPP G PPPPP GG G
Sbjct: 700 IPPPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPG 737
>AY360322-1|AAQ64023.1| 179|Homo sapiens diaphanous 1 protein.
Length = 179
Score = 32.7 bits (71), Expect = 2.1
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +3
Query: 654 LPPPPPXXXXXXXXXXXGXXKXGXXNXPPPPPXXGGGG 767
+PPPPP G PPPPP GG G
Sbjct: 84 IPPPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPG 121
>AF051782-1|AAC05373.1| 1248|Homo sapiens diaphanous 1 protein.
Length = 1248
Score = 32.7 bits (71), Expect = 2.1
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +3
Query: 654 LPPPPPXXXXXXXXXXXGXXKXGXXNXPPPPPXXGGGG 767
+PPPPP G PPPPP GG G
Sbjct: 679 IPPPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPG 716
>AB209482-1|BAD92719.1| 1299|Homo sapiens Diaphanous 1 variant
protein.
Length = 1299
Score = 32.7 bits (71), Expect = 2.1
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +3
Query: 654 LPPPPPXXXXXXXXXXXGXXKXGXXNXPPPPPXXGGGG 767
+PPPPP G PPPPP GG G
Sbjct: 727 IPPPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPG 764
>U80017-3|AAC52048.1| 294|Homo sapiens survival motor neuron
protein SMN protein.
Length = 294
Score = 32.3 bits (70), Expect = 2.7
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +3
Query: 651 FLPPPPPXXXXXXXXXXXGXXKXGXXNXPPPPP 749
FLPPPPP G G PPPPP
Sbjct: 193 FLPPPPPMPGPRLGPGKPGLKFNGPPPPPPPPP 225
>U43883-1|AAC50473.1| 294|Homo sapiens survival motor neuron
protein.
Length = 294
Score = 32.3 bits (70), Expect = 2.7
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +3
Query: 651 FLPPPPPXXXXXXXXXXXGXXKXGXXNXPPPPP 749
FLPPPPP G G PPPPP
Sbjct: 193 FLPPPPPMPGPRLGPGKPGLKFNGPPPPPPPPP 225
>U21914-1|AAA64505.1| 293|Homo sapiens U18423; it is not known if
this copy of the gene protein.
Length = 293
Score = 32.3 bits (70), Expect = 2.7
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +3
Query: 651 FLPPPPPXXXXXXXXXXXGXXKXGXXNXPPPPP 749
FLPPPPP G G PPPPP
Sbjct: 192 FLPPPPPMPGPRLGPGKPGLKFNGPPPPPPPPP 224
>U18423-1|AAA66242.1| 294|Homo sapiens spinal muscular atrophy
determining gene protein.
Length = 294
Score = 32.3 bits (70), Expect = 2.7
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +3
Query: 651 FLPPPPPXXXXXXXXXXXGXXKXGXXNXPPPPP 749
FLPPPPP G G PPPPP
Sbjct: 193 FLPPPPPMPGPRLGPGKPGLKFNGPPPPPPPPP 225
>BC070242-1|AAH70242.1| 282|Homo sapiens survival of motor neuron
2, centromeric protein.
Length = 282
Score = 32.3 bits (70), Expect = 2.7
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +3
Query: 651 FLPPPPPXXXXXXXXXXXGXXKXGXXNXPPPPP 749
FLPPPPP G G PPPPP
Sbjct: 193 FLPPPPPMPGPRLGPGKPGLKFNGPPPPPPPPP 225
>BC062723-1|AAH62723.1| 294|Homo sapiens survival of motor neuron
1, telomeric protein.
Length = 294
Score = 32.3 bits (70), Expect = 2.7
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +3
Query: 651 FLPPPPPXXXXXXXXXXXGXXKXGXXNXPPPPP 749
FLPPPPP G G PPPPP
Sbjct: 193 FLPPPPPMPGPRLGPGKPGLKFNGPPPPPPPPP 225
>BC015308-1|AAH15308.1| 294|Homo sapiens survival of motor neuron
1, telomeric protein.
Length = 294
Score = 32.3 bits (70), Expect = 2.7
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +3
Query: 651 FLPPPPPXXXXXXXXXXXGXXKXGXXNXPPPPP 749
FLPPPPP G G PPPPP
Sbjct: 193 FLPPPPPMPGPRLGPGKPGLKFNGPPPPPPPPP 225
>BC000908-1|AAH00908.1| 282|Homo sapiens SMN1 protein protein.
Length = 282
Score = 32.3 bits (70), Expect = 2.7
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +3
Query: 651 FLPPPPPXXXXXXXXXXXGXXKXGXXNXPPPPP 749
FLPPPPP G G PPPPP
Sbjct: 193 FLPPPPPMPGPRLGPGKPGLKFNGPPPPPPPPP 225
>AC005031-2|AAC62262.1| 294|Homo sapiens survival of motor neuron 1
product protein.
Length = 294
Score = 32.3 bits (70), Expect = 2.7
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +3
Query: 651 FLPPPPPXXXXXXXXXXXGXXKXGXXNXPPPPP 749
FLPPPPP G G PPPPP
Sbjct: 193 FLPPPPPMPGPRLGPGKPGLKFNGPPPPPPPPP 225
>AC004999-1|AAC83178.1| 294|Homo sapiens survival motor neuron 1
protein protein.
Length = 294
Score = 32.3 bits (70), Expect = 2.7
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +3
Query: 651 FLPPPPPXXXXXXXXXXXGXXKXGXXNXPPPPP 749
FLPPPPP G G PPPPP
Sbjct: 193 FLPPPPPMPGPRLGPGKPGLKFNGPPPPPPPPP 225
>AF199414-1|AAF86048.1| 648|Homo sapiens RNA helicase A binding
protein 95 protein.
Length = 648
Score = 26.6 bits (56), Expect(2) = 3.6
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -1
Query: 766 PPPPXXGGGGG 734
PPPP GGGGG
Sbjct: 604 PPPPPEGGGGG 614
Score = 23.8 bits (49), Expect(2) = 3.6
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -1
Query: 892 PPPPPPP 872
PPPPPPP
Sbjct: 602 PPPPPPP 608
>DQ854815-1|ABI75145.1| 112|Homo sapiens
hyperpolarization-activated cyclic nucleotide-gated
potassium channel 2 protein.
Length = 112
Score = 30.7 bits (66), Expect = 8.3
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +2
Query: 872 GGGGGGGXXXKKXKXXPPPPPPXXXXQKXPP 964
GGG G PPPPPP Q+ PP
Sbjct: 6 GGGRPGESPGATPAPGPPPPPPPAPPQQQPP 36
>AJ133727-1|CAB42630.1| 889|Homo sapiens
hyperpolarization-activated cyclic nucleotide-gated
channel hHCN2 protein.
Length = 889
Score = 30.7 bits (66), Expect = 8.3
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +2
Query: 872 GGGGGGGXXXKKXKXXPPPPPPXXXXQKXPP 964
GGG G PPPPPP Q+ PP
Sbjct: 6 GGGRPGESPGATPAPGPPPPPPPAPPQQQPP 36
>AJ012582-1|CAB42602.1| 889|Homo sapiens
hyperpolarization-activated cation channel HCN2 protein.
Length = 889
Score = 30.7 bits (66), Expect = 8.3
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +2
Query: 872 GGGGGGGXXXKKXKXXPPPPPPXXXXQKXPP 964
GGG G PPPPPP Q+ PP
Sbjct: 6 GGGRPGESPGATPAPGPPPPPPPAPPQQQPP 36
>AC005559-2|AAC33280.2| 528|Homo sapiens hyperpolarization
activated cyclic nucleotide-gated potassium channel 2
protein.
Length = 528
Score = 30.7 bits (66), Expect = 8.3
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +2
Query: 872 GGGGGGGXXXKKXKXXPPPPPPXXXXQKXPP 964
GGG G PPPPPP Q+ PP
Sbjct: 6 GGGRPGESPGATPAPGPPPPPPPAPPQQQPP 36
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,775,896
Number of Sequences: 237096
Number of extensions: 2253575
Number of successful extensions: 47812
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 4166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26380
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12825217482
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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