Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP27_F_K02
(800 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 0.73
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 2.2
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 2.2
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 2.2
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 30 2.2
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 2.9
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 28 6.8
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 28 6.8
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 28 8.9
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 28 8.9
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 28 8.9
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 28 8.9
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 28 8.9
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 31.5 bits (68), Expect = 0.73
Identities = 21/85 (24%), Positives = 21/85 (24%)
Frame = +2
Query: 263 PXIXDPPPXGXXFFKXXXXXGGFSPRGXXKKGGXPXXXXFFXXSPXKXXXXXKXXPPPPX 442
P PPP F GG P GG P P PPPP
Sbjct: 61 PSFFIPPPVPNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPP 120
Query: 443 XGGGXXXXXXXPXXXXGGXXXXXGG 517
G G P GG
Sbjct: 121 SGLGVAPQPPRPKTPVNPALAKLGG 145
Score = 28.7 bits (61), Expect = 5.1
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -1
Query: 782 PPPPXPXXXXXXXXXXXXGGGXXKKKXXXGGXPPPPP 672
PPPP P GG GG PPPPP
Sbjct: 75 PPPPGPGGIPPPPPMF--AGGIPPPPPMMGGIPPPPP 109
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/65 (29%), Positives = 20/65 (30%)
Frame = -2
Query: 514 PPXXXXPPXXXXGXXXXXXXPPPXXXGGGXXFXXXXXFXGGXXKKXXXGGXPPLFXXXPG 335
PP PP PPP GG GG GG PP+ P
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGG------LPPITGGPPPPPPPGGLPPISGGPPP 760
Query: 334 GKPPP 320
PPP
Sbjct: 761 PPPPP 765
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -1
Query: 785 PPPPPXPXXXXXXXXXXXXGGGXXKKKXXXGGXPPPPP 672
PPPPP P GG GG PPPPP
Sbjct: 742 PPPPPPPGGLPPI------SGGPPPPPPPPGGCPPPPP 773
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -1
Query: 785 PPPPPXPXXXXXXXXXXXXGGGXXKKKXXXGGXPPPPP 672
PPPPP P GG GG PPPPP
Sbjct: 759 PPPPPPPGGCPPPPPPPPPGG-------FKGGPPPPPP 789
Score = 23.8 bits (49), Expect(2) = 9.0
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -3
Query: 786 PPPPPPP 766
PPPPPPP
Sbjct: 784 PPPPPPP 790
Score = 22.2 bits (45), Expect(2) = 9.0
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -3
Query: 798 GXXXPPPPPP 769
G PPPPPP
Sbjct: 756 GGPPPPPPPP 765
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/65 (29%), Positives = 20/65 (30%)
Frame = -2
Query: 514 PPXXXXPPXXXXGXXXXXXXPPPXXXGGGXXFXXXXXFXGGXXKKXXXGGXPPLFXXXPG 335
PP PP PPP GG GG GG PP+ P
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGG------LPPITGGPPPPPPPGGLPPISGGPPP 760
Query: 334 GKPPP 320
PPP
Sbjct: 761 PPPPP 765
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -1
Query: 785 PPPPPXPXXXXXXXXXXXXGGGXXKKKXXXGGXPPPPP 672
PPPPP P GG GG PPPPP
Sbjct: 742 PPPPPPPGGLPPI------SGGPPPPPPPPGGCPPPPP 773
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -1
Query: 785 PPPPPXPXXXXXXXXXXXXGGGXXKKKXXXGGXPPPPP 672
PPPPP P GG GG PPPPP
Sbjct: 759 PPPPPPPGGCPPPPPPPPPGG-------FKGGPPPPPP 789
Score = 23.8 bits (49), Expect(2) = 9.0
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -3
Query: 786 PPPPPPP 766
PPPPPPP
Sbjct: 784 PPPPPPP 790
Score = 22.2 bits (45), Expect(2) = 9.0
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -3
Query: 798 GXXXPPPPPP 769
G PPPPPP
Sbjct: 756 GGPPPPPPPP 765
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/65 (29%), Positives = 20/65 (30%)
Frame = -2
Query: 514 PPXXXXPPXXXXGXXXXXXXPPPXXXGGGXXFXXXXXFXGGXXKKXXXGGXPPLFXXXPG 335
PP PP PPP GG GG GG PP+ P
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPPGG------LPPITGGPPPPPPPGGLPPISGGPPP 343
Query: 334 GKPPP 320
PPP
Sbjct: 344 PPPPP 348
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -1
Query: 785 PPPPPXPXXXXXXXXXXXXGGGXXKKKXXXGGXPPPPP 672
PPPPP P GG GG PPPPP
Sbjct: 325 PPPPPPPGGLPPI------SGGPPPPPPPPGGCPPPPP 356
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -1
Query: 785 PPPPPXPXXXXXXXXXXXXGGGXXKKKXXXGGXPPPPP 672
PPPPP P GG GG PPPPP
Sbjct: 342 PPPPPPPGGCPPPPPPPPPGG-------FKGGPPPPPP 372
Score = 23.8 bits (49), Expect(2) = 9.3
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -3
Query: 786 PPPPPPP 766
PPPPPPP
Sbjct: 367 PPPPPPP 373
Score = 22.2 bits (45), Expect(2) = 9.3
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -3
Query: 798 GXXXPPPPPP 769
G PPPPPP
Sbjct: 339 GGPPPPPPPP 348
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.9 bits (64), Expect = 2.2
Identities = 22/73 (30%), Positives = 23/73 (31%), Gaps = 6/73 (8%)
Frame = -1
Query: 521 PPPPX------KXXPPPLXXGXXXXXXXXPPPXXGGGXXFXXXXXFXGGXXKKKXXXXXP 360
PPPP PPP PPP GG F GG + P
Sbjct: 742 PPPPMFQQGFNAGAPPPPFGRGAGPMSSFPPPPRGGMHHMPPPPSFRGG---RGGHGGPP 798
Query: 359 PPFXXXPGGKTPP 321
PP GG PP
Sbjct: 799 PPHFDRRGGGGPP 811
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = +2
Query: 674 GGGGGXPPXXFFFXPPPPPXXXXXXXXXXXXGGGGGGG 787
GGGGG PPPPP G GGGGG
Sbjct: 43 GGGGGCGGGC---APPPPPPACGGGCGGGGGGCGGGGG 77
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = -2
Query: 523 PPPPPXXXXPPXXXXGXXXXXXXPPPXXXGG 431
PPPPP P G PPP GG
Sbjct: 632 PPPPPPPMGLPAVGAGAPPPPPPPPPSGAGG 662
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 28.3 bits (60), Expect = 6.8
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = -2
Query: 523 PPPPPXXXXPPXXXXGXXXXXXXPPPXXXGG 431
PPPPP P G PPP GG
Sbjct: 458 PPPPPPPMGLPAVGAGAPPPPPPPPPSGAGG 488
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -1
Query: 785 PPPPPXPXXXXXXXXXXXXGGGXXKKKXXXGGXPPPPP 672
PPPPP P G K GG PPPPP
Sbjct: 552 PPPPPLPLDLLK--------GAVAGLKSVPGGPPPPPP 581
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 27.9 bits (59), Expect = 8.9
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +2
Query: 674 GGGGGXPPXXFFFXPPPPP 730
GGGGG P PPPPP
Sbjct: 27 GGGGGCAPAAPACAPPPPP 45
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 27.9 bits (59), Expect = 8.9
Identities = 24/83 (28%), Positives = 24/83 (28%), Gaps = 3/83 (3%)
Frame = -2
Query: 559 GGGXKKXXXXXXPPPPPXXXXPPXXXXGXXXXXXXPPPXXXGGGXXFXXXXXFXGGXXKK 380
G G PPPP PP G PPP GG G
Sbjct: 251 GSGSPPPPPAAGSPPPPRTGSPPPPPTG------SPPPPPAGGS----PPPPRAGSPPPP 300
Query: 379 XXXGGXPPLFXXXP---GGKPPP 320
G PP P GG PPP
Sbjct: 301 PPPRGSPPTGSLPPPQAGGSPPP 323
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/42 (30%), Positives = 13/42 (30%)
Frame = -2
Query: 559 GGGXKKXXXXXXPPPPPXXXXPPXXXXGXXXXXXXPPPXXXG 434
GG PPPPP PP PPP G
Sbjct: 286 GGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTG 327
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 27.9 bits (59), Expect = 8.9
Identities = 24/83 (28%), Positives = 24/83 (28%), Gaps = 3/83 (3%)
Frame = -2
Query: 559 GGGXKKXXXXXXPPPPPXXXXPPXXXXGXXXXXXXPPPXXXGGGXXFXXXXXFXGGXXKK 380
G G PPPP PP G PPP GG G
Sbjct: 272 GSGSPPPPPAAGSPPPPRTGSPPPPPTG------SPPPPPAGGS----PPPPRAGSPPPP 321
Query: 379 XXXGGXPPLFXXXP---GGKPPP 320
G PP P GG PPP
Sbjct: 322 PPPRGSPPTGSLPPPQAGGSPPP 344
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/42 (30%), Positives = 13/42 (30%)
Frame = -2
Query: 559 GGGXKKXXXXXXPPPPPXXXXPPXXXXGXXXXXXXPPPXXXG 434
GG PPPPP PP PPP G
Sbjct: 307 GGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTG 348
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 27.9 bits (59), Expect = 8.9
Identities = 24/83 (28%), Positives = 24/83 (28%), Gaps = 3/83 (3%)
Frame = -2
Query: 559 GGGXKKXXXXXXPPPPPXXXXPPXXXXGXXXXXXXPPPXXXGGGXXFXXXXXFXGGXXKK 380
G G PPPP PP G PPP GG G
Sbjct: 257 GSGSPPPPPAAGSPPPPRTGSPPPPPTG------SPPPPPAGGS----PPPPRAGSPPPP 306
Query: 379 XXXGGXPPLFXXXP---GGKPPP 320
G PP P GG PPP
Sbjct: 307 PPPRGSPPTGSLPPPQAGGSPPP 329
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/42 (30%), Positives = 13/42 (30%)
Frame = -2
Query: 559 GGGXKKXXXXXXPPPPPXXXXPPXXXXGXXXXXXXPPPXXXG 434
GG PPPPP PP PPP G
Sbjct: 292 GGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTG 333
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,697,353
Number of Sequences: 27780
Number of extensions: 425854
Number of successful extensions: 4765
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 720
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2773
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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