Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_J24
         (908 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0499 - 9917891-9918148,9918240-9918494,9918769-9918940,991...    30   2.2  
04_04_0524 - 25916869-25916876,25917352-25917506,25917712-259178...    30   2.2  
11_01_0533 + 4214900-4215162,4215986-4219043,4219613-4221539,422...    30   2.9  

>09_02_0499 - 9917891-9918148,9918240-9918494,9918769-9918940,
            9919056-9919283,9919628-9919761,9919842-9919925,
            9920007-9920297,9920569-9920901,9921029-9921171,
            9921266-9921379,9921470-9921626,9921709-9921812,
            9921914-9922074,9922158-9922474,9922574-9922855,
            9923205-9923506,9923603-9923693,9923864-9923917,
            9924052-9924128,9924213-9924372,9924473-9924557,
            9924635-9924723,9925791-9925925
          Length = 1341

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 16/48 (33%), Positives = 24/48 (50%)
 Frame = -2

Query: 616  YWLYLVLWILKYTLLFSQQGNELPTDEFSMLVYTHRRRQFSHSRDWLW 473
            YW+  V W L Y L+ SQ G+   T +  + +       F + RD+LW
Sbjct: 1266 YWVCPVAWTL-YGLVTSQFGDVTDTFDNGVRISDFVESYFGYHRDFLW 1312


>04_04_0524 -
           25916869-25916876,25917352-25917506,25917712-25917841,
           25918013-25918094,25918180-25918213,25918271-25918327,
           25918686-25918791,25920755-25920881
          Length = 232

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 15/30 (50%), Positives = 20/30 (66%)
 Frame = -2

Query: 610 LYLVLWILKYTLLFSQQGNELPTDEFSMLV 521
           L L+ +IL+Y L F Q+ N LP D F+ LV
Sbjct: 47  LCLLWYILRYVLGFFQRYNLLPRDSFTFLV 76


>11_01_0533 + 4214900-4215162,4215986-4219043,4219613-4221539,
            4221561-4222094,4222388-4222842,4223073-4223189,
            4223319-4223477
          Length = 2170

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -3

Query: 546  QLTSSVCLSTPIAVGNSLIRGIGCGTELQSEVVVSVN 436
            Q+ +S+C   P  +G  L R  GC   L S V+ S N
Sbjct: 945  QILASLCQDQPSLLGEHLNRSQGCIASLASRVIESTN 981


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,921,435
Number of Sequences: 37544
Number of extensions: 379613
Number of successful extensions: 1014
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1014
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)