Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_J24
         (908 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    26   0.41 
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    24   2.2  
DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    24   2.2  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    22   6.7  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    22   6.7  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    22   6.7  

>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 26.2 bits (55), Expect = 0.41
 Identities = 17/57 (29%), Positives = 30/57 (52%)
 Frame = +1

Query: 181 QDLEEKLYNSILTGDYDSAVRQSLEYESQGKGSIIQNVVNNLIIDKRRNTMEYCYKL 351
           ++ E+++ ++IL G YD+ +R S E  + G   +  N+    I      TMEY  +L
Sbjct: 29  REKEKEVLDNIL-GGYDARIRPSGENATDGPAVVRVNIFVRSISKIDDVTMEYSVQL 84


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 16/57 (28%), Positives = 29/57 (50%)
 Frame = +1

Query: 181 QDLEEKLYNSILTGDYDSAVRQSLEYESQGKGSIIQNVVNNLIIDKRRNTMEYCYKL 351
           ++ E+++ ++IL G YD+ +R S E  + G   +  N+    I       MEY  +L
Sbjct: 29  REKEKEVLDNIL-GGYDARIRPSGENATDGPAIVRVNLFVRSIATISDIKMEYSVQL 84


>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 15/62 (24%), Positives = 31/62 (50%)
 Frame = +3

Query: 441 QKLQPRSEARFHNQSLE*ENCLRRWV*TSILNSSVGSSLPCWENNRVYFKIHNTKYNQYL 620
           +K + RS+ R  +++ E E      + +S+ N ++ ++     NN   +  +N  YN Y 
Sbjct: 57  RKYRERSKERSRDRT-ERERSREPKIISSLSNKTIHNNNNYNNNNYNNYNYNNNNYNNYK 115

Query: 621 KM 626
           K+
Sbjct: 116 KL 117


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +3

Query: 522 TSILNSSVGSSLPCWENN 575
           T +   S G +LP W NN
Sbjct: 180 TLVAEQSYGLTLPSWTNN 197


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +3

Query: 522 TSILNSSVGSSLPCWENN 575
           T +   S G +LP W NN
Sbjct: 195 TLVAEQSYGLTLPSWTNN 212


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +3

Query: 522 TSILNSSVGSSLPCWENN 575
           T +   S G +LP W NN
Sbjct: 83  TLVAEQSYGLTLPSWTNN 100


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,465
Number of Sequences: 438
Number of extensions: 4079
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29509116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)