Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP27_F_J18
(886 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 332 2e-91
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 332 2e-91
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 332 2e-91
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 332 2e-91
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 332 2e-91
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 332 2e-91
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 331 3e-91
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 330 1e-90
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 321 5e-88
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 293 8e-80
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 239 2e-63
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 202 3e-52
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 186 1e-47
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 186 1e-47
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 185 3e-47
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 180 2e-45
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 160 1e-39
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 133 1e-31
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 98 8e-21
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 52 7e-07
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 52 7e-07
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 42 4e-04
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 34 0.16
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 31 1.4
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 31 1.4
U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical pr... 31 1.4
U10401-4|AAN65289.1| 937|Caenorhabditis elegans Myc and mondo-l... 30 1.9
U10401-3|AAA19059.2| 1009|Caenorhabditis elegans Myc and mondo-l... 30 1.9
AF264757-1|AAK20949.1| 1009|Caenorhabditis elegans Mlx interacto... 30 1.9
AF213473-1|AAL50027.1| 913|Caenorhabditis elegans basic helix-l... 30 1.9
AL117195-12|CAB60765.1| 425|Caenorhabditis elegans Hypothetical... 29 3.3
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 29 4.4
AF067616-11|AAC19194.2| 627|Caenorhabditis elegans Collagen pro... 28 7.7
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 332 bits (816), Expect = 2e-91
Identities = 153/158 (96%), Positives = 156/158 (98%)
Frame = +2
Query: 137 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 316
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 317 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXANREKM 496
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP ANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 497 TQIMFETFNTPXMYVAIQAVLSLYASGRTTGIVLDSGE 610
TQIMFETFNTP MYVAIQAVLSLYASGRTTG+VLDSG+
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGD 158
Score = 90.2 bits (214), Expect = 2e-18
Identities = 43/51 (84%), Positives = 45/51 (88%)
Frame = +3
Query: 609 NGVSHTVXIYEGYALPXAILGLDLAGRDLTDYLMXILTXRGYSFTTTAXRE 761
+GV+HTV IYEGYALP AIL LDLAGRDLTDYLM ILT RGYSFTTTA RE
Sbjct: 158 DGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAERE 208
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 332 bits (816), Expect = 2e-91
Identities = 153/158 (96%), Positives = 156/158 (98%)
Frame = +2
Query: 137 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 316
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 317 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXANREKM 496
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP ANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 497 TQIMFETFNTPXMYVAIQAVLSLYASGRTTGIVLDSGE 610
TQIMFETFNTP MYVAIQAVLSLYASGRTTG+VLDSG+
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGD 158
Score = 90.2 bits (214), Expect = 2e-18
Identities = 43/51 (84%), Positives = 45/51 (88%)
Frame = +3
Query: 609 NGVSHTVXIYEGYALPXAILGLDLAGRDLTDYLMXILTXRGYSFTTTAXRE 761
+GV+HTV IYEGYALP AIL LDLAGRDLTDYLM ILT RGYSFTTTA RE
Sbjct: 158 DGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAERE 208
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 332 bits (816), Expect = 2e-91
Identities = 153/158 (96%), Positives = 156/158 (98%)
Frame = +2
Query: 137 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 316
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 317 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXANREKM 496
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP ANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 497 TQIMFETFNTPXMYVAIQAVLSLYASGRTTGIVLDSGE 610
TQIMFETFNTP MYVAIQAVLSLYASGRTTG+VLDSG+
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGD 158
Score = 90.2 bits (214), Expect = 2e-18
Identities = 43/51 (84%), Positives = 45/51 (88%)
Frame = +3
Query: 609 NGVSHTVXIYEGYALPXAILGLDLAGRDLTDYLMXILTXRGYSFTTTAXRE 761
+GV+HTV IYEGYALP AIL LDLAGRDLTDYLM ILT RGYSFTTTA RE
Sbjct: 158 DGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAERE 208
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 332 bits (816), Expect = 2e-91
Identities = 153/158 (96%), Positives = 156/158 (98%)
Frame = +2
Query: 137 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 316
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 317 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXANREKM 496
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP ANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 497 TQIMFETFNTPXMYVAIQAVLSLYASGRTTGIVLDSGE 610
TQIMFETFNTP MYVAIQAVLSLYASGRTTG+VLDSG+
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGD 158
Score = 90.2 bits (214), Expect = 2e-18
Identities = 43/51 (84%), Positives = 45/51 (88%)
Frame = +3
Query: 609 NGVSHTVXIYEGYALPXAILGLDLAGRDLTDYLMXILTXRGYSFTTTAXRE 761
+GV+HTV IYEGYALP AIL LDLAGRDLTDYLM ILT RGYSFTTTA RE
Sbjct: 158 DGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAERE 208
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 332 bits (816), Expect = 2e-91
Identities = 153/158 (96%), Positives = 156/158 (98%)
Frame = +2
Query: 137 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 316
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 317 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXANREKM 496
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP ANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 497 TQIMFETFNTPXMYVAIQAVLSLYASGRTTGIVLDSGE 610
TQIMFETFNTP MYVAIQAVLSLYASGRTTG+VLDSG+
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGD 158
Score = 90.2 bits (214), Expect = 2e-18
Identities = 43/51 (84%), Positives = 45/51 (88%)
Frame = +3
Query: 609 NGVSHTVXIYEGYALPXAILGLDLAGRDLTDYLMXILTXRGYSFTTTAXRE 761
+GV+HTV IYEGYALP AIL LDLAGRDLTDYLM ILT RGYSFTTTA RE
Sbjct: 158 DGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAERE 208
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 332 bits (816), Expect = 2e-91
Identities = 153/158 (96%), Positives = 156/158 (98%)
Frame = +2
Query: 137 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 316
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 317 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXANREKM 496
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP ANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 497 TQIMFETFNTPXMYVAIQAVLSLYASGRTTGIVLDSGE 610
TQIMFETFNTP MYVAIQAVLSLYASGRTTG+VLDSG+
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGD 158
Score = 90.2 bits (214), Expect = 2e-18
Identities = 43/51 (84%), Positives = 45/51 (88%)
Frame = +3
Query: 609 NGVSHTVXIYEGYALPXAILGLDLAGRDLTDYLMXILTXRGYSFTTTAXRE 761
+GV+HTV IYEGYALP AIL LDLAGRDLTDYLM ILT RGYSFTTTA RE
Sbjct: 158 DGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAERE 208
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 331 bits (814), Expect = 3e-91
Identities = 153/158 (96%), Positives = 156/158 (98%)
Frame = +2
Query: 137 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 316
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 317 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXANREKM 496
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP ANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 497 TQIMFETFNTPXMYVAIQAVLSLYASGRTTGIVLDSGE 610
TQIMFETFNTP MYVAIQAVLSLYASGRTTGIVLDSG+
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 158
Score = 90.2 bits (214), Expect = 2e-18
Identities = 43/51 (84%), Positives = 45/51 (88%)
Frame = +3
Query: 609 NGVSHTVXIYEGYALPXAILGLDLAGRDLTDYLMXILTXRGYSFTTTAXRE 761
+GV+HTV IYEGYALP AIL LDLAGRDLTDYLM ILT RGYSFTTTA RE
Sbjct: 158 DGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAERE 208
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 330 bits (810), Expect = 1e-90
Identities = 151/158 (95%), Positives = 156/158 (98%)
Frame = +2
Query: 137 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 316
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 317 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXANREKM 496
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP ANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 497 TQIMFETFNTPXMYVAIQAVLSLYASGRTTGIVLDSGE 610
TQIMFETFNTP MYVAIQAVLSLYASGRTTGIVLDSG+
Sbjct: 121 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 158
Score = 90.2 bits (214), Expect = 2e-18
Identities = 43/51 (84%), Positives = 45/51 (88%)
Frame = +3
Query: 609 NGVSHTVXIYEGYALPXAILGLDLAGRDLTDYLMXILTXRGYSFTTTAXRE 761
+GV+HTV IYEGYALP AIL LDLAGRDLTDYLM ILT RGYSFTTTA RE
Sbjct: 158 DGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAERE 208
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 321 bits (788), Expect = 5e-88
Identities = 147/156 (94%), Positives = 153/156 (98%)
Frame = +2
Query: 143 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 322
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 323 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXANREKMTQ 502
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNP +NREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQ 121
Query: 503 IMFETFNTPXMYVAIQAVLSLYASGRTTGIVLDSGE 610
IMFETFNTP MYV IQAVLSLYASGRTTGIVLD+G+
Sbjct: 122 IMFETFNTPAMYVNIQAVLSLYASGRTTGIVLDTGD 157
Score = 85.8 bits (203), Expect = 4e-17
Identities = 40/51 (78%), Positives = 44/51 (86%)
Frame = +3
Query: 609 NGVSHTVXIYEGYALPXAILGLDLAGRDLTDYLMXILTXRGYSFTTTAXRE 761
+GV+HTV IYEGYALP AI LDLAGRDLTDY+M ILT RGY+FTTTA RE
Sbjct: 157 DGVTHTVPIYEGYALPHAIQRLDLAGRDLTDYMMKILTERGYTFTTTAERE 207
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 293 bits (720), Expect = 8e-80
Identities = 135/140 (96%), Positives = 138/140 (98%)
Frame = +2
Query: 191 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 370
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64
Query: 371 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXANREKMTQIMFETFNTPXMYVAIQ 550
NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP ANREKMTQIMFETFNTP MYVAIQ
Sbjct: 65 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 124
Query: 551 AVLSLYASGRTTGIVLDSGE 610
AVLSLYASGRTTG+VLDSG+
Sbjct: 125 AVLSLYASGRTTGVVLDSGD 144
Score = 90.2 bits (214), Expect = 2e-18
Identities = 43/51 (84%), Positives = 45/51 (88%)
Frame = +3
Query: 609 NGVSHTVXIYEGYALPXAILGLDLAGRDLTDYLMXILTXRGYSFTTTAXRE 761
+GV+HTV IYEGYALP AIL LDLAGRDLTDYLM ILT RGYSFTTTA RE
Sbjct: 144 DGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAERE 194
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 239 bits (585), Expect = 2e-63
Identities = 110/114 (96%), Positives = 112/114 (98%)
Frame = +2
Query: 269 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 448
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 449 LLTEAPLNPXANREKMTQIMFETFNTPXMYVAIQAVLSLYASGRTTGIVLDSGE 610
LLTEAPLNP ANREKMTQIMFETFNTP MYVAIQAVLSLYASGRTTG+VLDSG+
Sbjct: 61 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGD 114
Score = 90.2 bits (214), Expect = 2e-18
Identities = 43/51 (84%), Positives = 45/51 (88%)
Frame = +3
Query: 609 NGVSHTVXIYEGYALPXAILGLDLAGRDLTDYLMXILTXRGYSFTTTAXRE 761
+GV+HTV IYEGYALP AIL LDLAGRDLTDYLM ILT RGYSFTTTA RE
Sbjct: 114 DGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAERE 164
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 202 bits (492), Expect = 3e-52
Identities = 87/151 (57%), Positives = 118/151 (78%), Gaps = 1/151 (0%)
Frame = +2
Query: 161 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 340
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G +A+S RG+ ++
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNRGLFSI 70
Query: 341 KYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPXANREKMTQIMFET 517
+YP+EHGIV NW DMEKIW + F ++L++ PEEHPVLLT+APLNP NRE+ +I FET
Sbjct: 71 EYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSAEIFFET 130
Query: 518 FNTPXMYVAIQAVLSLYASGRTTGIVLDSGE 610
FN P +Y+ +QAVLSLYA+GRTTG+VLDSG+
Sbjct: 131 FNVPALYIQMQAVLSLYATGRTTGVVLDSGD 161
Score = 51.2 bits (117), Expect = 1e-06
Identities = 22/44 (50%), Positives = 31/44 (70%)
Frame = +3
Query: 609 NGVSHTVXIYEGYALPXAILGLDLAGRDLTDYLMXILTXRGYSF 740
+GV+H V I +G+A+ AI +DLAGRD+T+YL +L GY F
Sbjct: 161 DGVTHAVPIVKGFAMKHAIQRMDLAGRDVTEYLRVLLRREGYEF 204
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 186 bits (454), Expect = 1e-47
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = +2
Query: 137 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 316
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 317 SKRGILTLKYPIEHGIVTNWDDMEKI 394
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 186 bits (454), Expect = 1e-47
Identities = 85/86 (98%), Positives = 86/86 (100%)
Frame = +2
Query: 137 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 316
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 317 SKRGILTLKYPIEHGIVTNWDDMEKI 394
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 185 bits (451), Expect = 3e-47
Identities = 84/86 (97%), Positives = 86/86 (100%)
Frame = +2
Query: 137 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 316
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 317 SKRGILTLKYPIEHGIVTNWDDMEKI 394
SKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 180 bits (437), Expect = 2e-45
Identities = 81/83 (97%), Positives = 83/83 (100%)
Frame = +2
Query: 137 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 316
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 317 SKRGILTLKYPIEHGIVTNWDDM 385
SKRGILTLKYPIEHGIVTNWDDM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDM 83
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 160 bits (389), Expect = 1e-39
Identities = 79/153 (51%), Positives = 106/153 (69%), Gaps = 3/153 (1%)
Frame = +2
Query: 161 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM-VGMGQ-KDSYVGDEAQSKRGIL 334
+VVDNG+G K G+AG + P +FPS+VGRP + VG + KD VG+E R +L
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 335 TLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPXANREKMTQIMF 511
+ YP+++GIV NWDDM +W HTF E L + P+E +LLTE PLNP +NREKM Q+MF
Sbjct: 69 DINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMF 128
Query: 512 ETFNTPXMYVAIQAVLSLYASGRTTGIVLDSGE 610
E + +YVA+QAVL+LYA G TG+V+DSG+
Sbjct: 129 EQYGFNSIYVAVQAVLTLYAQGLLTGVVVDSGD 161
Score = 53.6 bits (123), Expect = 2e-07
Identities = 24/51 (47%), Positives = 34/51 (66%)
Frame = +3
Query: 609 NGVSHTVXIYEGYALPXAILGLDLAGRDLTDYLMXILTXRGYSFTTTAXRE 761
+GV+H +YEG+AL LD+AGRD+T YL+ +L RGY+F +A E
Sbjct: 161 DGVTHICPVYEGFALHHLTRRLDIAGRDITKYLIKLLLQRGYNFNHSADFE 211
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 133 bits (322), Expect = 1e-31
Identities = 77/186 (41%), Positives = 104/186 (55%), Gaps = 24/186 (12%)
Frame = +2
Query: 137 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI------VGRPRHQG------VMVGM 280
M ++ A V+DNG+G K G+AG+ P+ + PS V Q V G+
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGI 60
Query: 281 GQKDSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 457
D ++GDEA S T+KYPI HGIV +WD ME+ W + LR PE+H LLT
Sbjct: 61 DDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLT 120
Query: 458 EAPLNPXANREKMTQIMFETFNTPXMYVAIQAVLSLYASGRT--------TGIVLDSGE- 610
E PLN NRE +IMFE+FN P +Y+A+QAVL+L AS + TG+V+DSG+
Sbjct: 121 EPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDG 180
Query: 611 --RCLP 622
C+P
Sbjct: 181 VTHCIP 186
Score = 35.5 bits (78), Expect = 0.051
Identities = 13/43 (30%), Positives = 27/43 (62%)
Frame = +3
Query: 609 NGVSHTVXIYEGYALPXAILGLDLAGRDLTDYLMXILTXRGYS 737
+GV+H + + +GY + I + +AGRD+T ++ +L R ++
Sbjct: 179 DGVTHCIPVADGYVIGSCIKHIPIAGRDITYFIQSLLRDREHT 221
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 97.9 bits (233), Expect = 8e-21
Identities = 61/171 (35%), Positives = 90/171 (52%), Gaps = 17/171 (9%)
Frame = +2
Query: 146 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA--QS 319
+EV+ LV D GS + GFAG++ P+ PS + Q+ GD + Q+
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYIAVQEALPDDTIEKQEAMEEGDNSKVQT 68
Query: 320 KR------GILTLKYP---------IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 454
KR G + P ++ G++ +W+ EKI H++ N L P EHPVL
Sbjct: 69 KREKNFFIGTTKIIVPRARTNMESFMKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLF 128
Query: 455 TEAPLNPXANREKMTQIMFETFNTPXMYVAIQAVLSLYASGRTTGIVLDSG 607
+E+ N A REK+T+IMFE F P Y++ VLS +A GRT G+++DSG
Sbjct: 129 SESSWNDRARREKLTEIMFEKFQVPAYYLSKNVVLSCFAQGRTHGLMVDSG 179
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 51.6 bits (118), Expect = 7e-07
Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 4/156 (2%)
Frame = +2
Query: 152 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 331
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 332 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXANREKMTQIMF 511
++ PIE G V NWD ++IW TF + V + LT+ A + ++I+F
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILF 115
Query: 512 ETFNTPXMYVAIQAVLSLYASGRTT----GIVLDSG 607
+ F ++ + L S + +V+DSG
Sbjct: 116 DYFGFTEVHKTSASTLVAKHSNKINNEKCAVVVDSG 151
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 51.6 bits (118), Expect = 7e-07
Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 4/156 (2%)
Frame = +2
Query: 152 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 331
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 332 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXANREKMTQIMF 511
++ PIE G V NWD ++IW TF + V + LT+ A + ++I+F
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILF 115
Query: 512 ETFNTPXMYVAIQAVLSLYASGRTT----GIVLDSG 607
+ F ++ + L S + +V+DSG
Sbjct: 116 DYFGFTEVHKTSASTLVAKHSNKINNEKCAVVVDSG 151
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 42.3 bits (95), Expect = 4e-04
Identities = 41/153 (26%), Positives = 63/153 (41%), Gaps = 2/153 (1%)
Frame = +2
Query: 161 LVVDNGSGMCKAGFAGDDA--PRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 334
L+++ GS +AG + P++ FP+I R + VG + R I
Sbjct: 181 LILELGSCSIRAGVLTTEPSLPQSFFPAIAVRTDDGKIFVGEDAYRPEIRHNGDFVRPIS 240
Query: 335 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPXANREKMTQIMFE 514
+E + D+ K EL+V P ++ VLL+ P ++ QI E
Sbjct: 241 ATDPSVERYSIDK--DVLKAVIGKVTKELKVEPWKYKVLLSIPQNIPTVLIGELLQICLE 298
Query: 515 TFNTPXMYVAIQAVLSLYASGRTTGIVLDSGER 613
+ Q L LYA TTG+V+D GER
Sbjct: 299 DIKFQSAGITRQPSLILYAYDVTTGVVVDIGER 331
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 33.9 bits (74), Expect = 0.16
Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 1/109 (0%)
Frame = -2
Query: 465 GASVSRTGCSSGATRSSL*KV*CQIFSMSSQLVTIPCSMGYLRVRIPLLLCASSPTYESF 286
GA S G SS S+ I + ++ T+ S PL++ +SS S
Sbjct: 424 GAPSSTLGSSSSTIVSTT------ITPSTPKVSTLTLSQSPTPTSTPLVVSSSSSGSSST 477
Query: 285 CPMPTITP*WRGLPTIEGN-TARGASSPAKPALHIPEPLSTTNAATSSS 142
TITP +G+PT N S+P P + STT A +++S
Sbjct: 478 VVTSTITPSTQGVPTSTSNQPTPSTSNPTTPKSTVTASPSTTGATSTAS 526
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +3
Query: 537 TSPSKPCSHCTRPVVPPVSCWTPANGVSHT 626
T+P P S T P VPPV+ TP S T
Sbjct: 664 TAPVNPTSPTTAPTVPPVTTTTPTTTTSTT 693
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +3
Query: 537 TSPSKPCSHCTRPVVPPVSCWTPANGVSHT 626
T+P P S T P VPPV+ TP S T
Sbjct: 720 TAPVNPTSPTTAPTVPPVTTTTPTTTTSTT 749
>U51998-5|AAL00856.2| 648|Caenorhabditis elegans Hypothetical
protein C12D12.1b protein.
Length = 648
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = +3
Query: 537 TSPSKPCSHCTRPVVPPVSCWTPANGVSHT 626
T+P P S T P VPPV+ TP S T
Sbjct: 543 TAPVNPTSPTTAPTVPPVTTTTPTTTTSTT 572
>U10401-4|AAN65289.1| 937|Caenorhabditis elegans Myc and mondo-like
protein 1, isoformb protein.
Length = 937
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = -2
Query: 306 SPTYESFCPMPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAAT 151
SPTY++F T P P+ G+ + AS P + + H P+ ++ +A++
Sbjct: 670 SPTYQAFAASVTTKPSILESPSTSGDISGPASVPVQASQHPPKIITPPSASS 721
>U10401-3|AAA19059.2| 1009|Caenorhabditis elegans Myc and mondo-like
protein 1, isoforma protein.
Length = 1009
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = -2
Query: 306 SPTYESFCPMPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAAT 151
SPTY++F T P P+ G+ + AS P + + H P+ ++ +A++
Sbjct: 670 SPTYQAFAASVTTKPSILESPSTSGDISGPASVPVQASQHPPKIITPPSASS 721
>AF264757-1|AAK20949.1| 1009|Caenorhabditis elegans Mlx interactor
protein.
Length = 1009
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = -2
Query: 306 SPTYESFCPMPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAAT 151
SPTY++F T P P+ G+ + AS P + + H P+ ++ +A++
Sbjct: 670 SPTYQAFAASVTTKPSILESPSTSGDISGPASVPVQASQHPPKIITPPSASS 721
>AF213473-1|AAL50027.1| 913|Caenorhabditis elegans basic
helix-loop-helix leucinezipper WBSCR14-like protein
protein.
Length = 913
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = -2
Query: 306 SPTYESFCPMPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAAT 151
SPTY++F T P P+ G+ + AS P + + H P+ ++ +A++
Sbjct: 574 SPTYQAFAASVTTKPSILESPSTSGDISGPASVPVQASQHPPKIITPPSASS 625
>AL117195-12|CAB60765.1| 425|Caenorhabditis elegans Hypothetical
protein Y57A10A.19 protein.
Length = 425
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +1
Query: 238 DRRKAPPSGRDGRHGTEGLVRRRRSTEQKRYP-DPQIPHR 354
DRR++P R+ R E RRRS E++R P + R
Sbjct: 286 DRRRSPEDPRERRRSPEDRTVRRRSPERRRQQRSPSVERR 325
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 29.1 bits (62), Expect = 4.4
Identities = 23/68 (33%), Positives = 26/68 (38%)
Frame = +1
Query: 250 APPSGRDGRHGTEGLVRRRRSTEQKRYPDPQIPHRTRNRH*LG*HGEDLASYLLQ*AACR 429
A P+G DG GT G + YP+P P G G D AS A
Sbjct: 195 AGPAGNDGAAGTPG---PDGPAGESTYPEPAAPGPAGPPGPAGPPGPDGASPTAAPGAAG 251
Query: 430 PRGTPRPA 453
P G P PA
Sbjct: 252 PPGPPGPA 259
>AF067616-11|AAC19194.2| 627|Caenorhabditis elegans Collagen
protein 99 protein.
Length = 627
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = +1
Query: 256 PSGRDGRHGTEGLVRRRRSTEQKRYPDPQIP 348
P G G HGTEG ++ K YP P P
Sbjct: 514 PMGLRGPHGTEGETGKQGPEGSKGYPGPMGP 544
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,199,002
Number of Sequences: 27780
Number of extensions: 426657
Number of successful extensions: 1497
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1320
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1488
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -