Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP27_F_J16
(902 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X87373-1|CAA60827.1| 264|Homo sapiens ribosomal protein S3a pro... 268 1e-71
M84711-1|AAA58487.1| 264|Homo sapiens v-fos transformation effe... 268 1e-71
M77234-1|AAA60290.1| 264|Homo sapiens ribosomal protein S3a pro... 268 1e-71
L13802-1|AAA35682.1| 264|Homo sapiens ribosmal protein small su... 268 1e-71
BC071916-1|AAH71916.1| 264|Homo sapiens ribosomal protein S3A p... 268 1e-71
BC070211-1|AAH70211.1| 264|Homo sapiens ribosomal protein S3A p... 268 1e-71
BC066926-1|AAH66926.1| 264|Homo sapiens ribosomal protein S3A p... 268 1e-71
BC030161-1|AAH30161.1| 264|Homo sapiens ribosomal protein S3A p... 268 1e-71
BC019072-1|AAH19072.1| 264|Homo sapiens ribosomal protein S3A p... 268 1e-71
BC017123-1|AAH17123.1| 264|Homo sapiens ribosomal protein S3A p... 268 1e-71
BC009404-1|AAH09404.1| 264|Homo sapiens ribosomal protein S3A p... 268 1e-71
BC009219-1|AAH09219.1| 264|Homo sapiens ribosomal protein S3A p... 268 1e-71
BC006298-1|AAH06298.1| 264|Homo sapiens ribosomal protein S3A p... 268 1e-71
BC004981-1|AAH04981.1| 264|Homo sapiens ribosomal protein S3A p... 268 1e-71
BC001708-1|AAH01708.1| 264|Homo sapiens ribosomal protein S3A p... 268 1e-71
BC000204-1|AAH00204.1| 264|Homo sapiens ribosomal protein S3A p... 268 1e-71
AB007148-1|BAA25814.1| 57|Homo sapiens ribosomal protein S3a p... 45 4e-04
BC058900-1|AAH58900.1| 533|Homo sapiens RABEP2 protein protein. 32 2.5
BC027584-1|AAH27584.1| 369|Homo sapiens RABEP2 protein protein. 32 2.5
AK026935-1|BAB15594.1| 538|Homo sapiens protein ( Homo sapiens ... 32 2.5
>X87373-1|CAA60827.1| 264|Homo sapiens ribosomal protein S3a
protein.
Length = 264
Score = 268 bits (658), Expect = 1e-71
Identities = 139/220 (63%), Positives = 161/220 (73%), Gaps = 4/220 (1%)
Frame = +1
Query: 226 LSTVPRXTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 405
L T + TKIAS+GLKGRVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHGMD
Sbjct: 48 LVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMD 104
Query: 406 LTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAI 585
LT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR I
Sbjct: 105 LTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQI 164
Query: 586 RKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIXPLRDVCIRKVKVLXKXRFE 765
RKKM EI+TR+V ++L+EVVNKLIPDSI KDIEKAC I PL DV +RKVK+L K +FE
Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFE 224
Query: 766 ISKLMELH----XXXXXXXXXXXXXXXRXXGYXPPVQXSV 873
+ KLMELH R GY PPVQ SV
Sbjct: 225 LGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264
Score = 64.1 bits (149), Expect = 7e-10
Identities = 26/47 (55%), Positives = 36/47 (76%)
Frame = +3
Query: 144 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 284
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQG + ++G+ F
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
>M84711-1|AAA58487.1| 264|Homo sapiens v-fos transformation
effector protein protein.
Length = 264
Score = 268 bits (658), Expect = 1e-71
Identities = 139/220 (63%), Positives = 161/220 (73%), Gaps = 4/220 (1%)
Frame = +1
Query: 226 LSTVPRXTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 405
L T + TKIAS+GLKGRVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHGMD
Sbjct: 48 LVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMD 104
Query: 406 LTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAI 585
LT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR I
Sbjct: 105 LTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQI 164
Query: 586 RKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIXPLRDVCIRKVKVLXKXRFE 765
RKKM EI+TR+V ++L+EVVNKLIPDSI KDIEKAC I PL DV +RKVK+L K +FE
Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFE 224
Query: 766 ISKLMELH----XXXXXXXXXXXXXXXRXXGYXPPVQXSV 873
+ KLMELH R GY PPVQ SV
Sbjct: 225 LGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264
Score = 64.1 bits (149), Expect = 7e-10
Identities = 26/47 (55%), Positives = 36/47 (76%)
Frame = +3
Query: 144 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 284
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQG + ++G+ F
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
>M77234-1|AAA60290.1| 264|Homo sapiens ribosomal protein S3a
protein.
Length = 264
Score = 268 bits (658), Expect = 1e-71
Identities = 139/220 (63%), Positives = 161/220 (73%), Gaps = 4/220 (1%)
Frame = +1
Query: 226 LSTVPRXTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 405
L T + TKIAS+GLKGRVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHGMD
Sbjct: 48 LVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMD 104
Query: 406 LTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAI 585
LT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR I
Sbjct: 105 LTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQI 164
Query: 586 RKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIXPLRDVCIRKVKVLXKXRFE 765
RKKM EI+TR+V ++L+EVVNKLIPDSI KDIEKAC I PL DV +RKVK+L K +FE
Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFE 224
Query: 766 ISKLMELH----XXXXXXXXXXXXXXXRXXGYXPPVQXSV 873
+ KLMELH R GY PPVQ SV
Sbjct: 225 LGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264
Score = 64.1 bits (149), Expect = 7e-10
Identities = 26/47 (55%), Positives = 36/47 (76%)
Frame = +3
Query: 144 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 284
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQG + ++G+ F
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
>L13802-1|AAA35682.1| 264|Homo sapiens ribosmal protein small
subunit protein.
Length = 264
Score = 268 bits (658), Expect = 1e-71
Identities = 140/220 (63%), Positives = 162/220 (73%), Gaps = 4/220 (1%)
Frame = +1
Query: 226 LSTVPRXTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 405
L T + TKIAS+GLKGRVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHGMD
Sbjct: 48 LVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMD 104
Query: 406 LTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAI 585
LT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR I
Sbjct: 105 LTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQI 164
Query: 586 RKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIXPLRDVCIRKVKVLXKXRFE 765
RKKM EI+TR+V ++L+EVVNKLIPDSI KDIEKAC I PL DV +RKVK+L K +FE
Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFE 224
Query: 766 ISKLMELH----XXXXXXXXXXXXXXXRXXGYXPPVQXSV 873
+ KLMELH R GY PPVQ SV
Sbjct: 225 LGKLMELHGEGSSSXKATGDETGAKVERADGYEPPVQESV 264
Score = 64.1 bits (149), Expect = 7e-10
Identities = 26/47 (55%), Positives = 36/47 (76%)
Frame = +3
Query: 144 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 284
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQG + ++G+ F
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
>BC071916-1|AAH71916.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 268 bits (658), Expect = 1e-71
Identities = 139/220 (63%), Positives = 161/220 (73%), Gaps = 4/220 (1%)
Frame = +1
Query: 226 LSTVPRXTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 405
L T + TKIAS+GLKGRVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHGMD
Sbjct: 48 LVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMD 104
Query: 406 LTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAI 585
LT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR I
Sbjct: 105 LTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQI 164
Query: 586 RKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIXPLRDVCIRKVKVLXKXRFE 765
RKKM EI+TR+V ++L+EVVNKLIPDSI KDIEKAC I PL DV +RKVK+L K +FE
Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFE 224
Query: 766 ISKLMELH----XXXXXXXXXXXXXXXRXXGYXPPVQXSV 873
+ KLMELH R GY PPVQ SV
Sbjct: 225 LGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264
Score = 64.1 bits (149), Expect = 7e-10
Identities = 26/47 (55%), Positives = 36/47 (76%)
Frame = +3
Query: 144 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 284
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQG + ++G+ F
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
>BC070211-1|AAH70211.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 268 bits (658), Expect = 1e-71
Identities = 139/220 (63%), Positives = 161/220 (73%), Gaps = 4/220 (1%)
Frame = +1
Query: 226 LSTVPRXTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 405
L T + TKIAS+GLKGRVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHGMD
Sbjct: 48 LVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMD 104
Query: 406 LTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAI 585
LT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR I
Sbjct: 105 LTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQI 164
Query: 586 RKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIXPLRDVCIRKVKVLXKXRFE 765
RKKM EI+TR+V ++L+EVVNKLIPDSI KDIEKAC I PL DV +RKVK+L K +FE
Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFE 224
Query: 766 ISKLMELH----XXXXXXXXXXXXXXXRXXGYXPPVQXSV 873
+ KLMELH R GY PPVQ SV
Sbjct: 225 LGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264
Score = 64.1 bits (149), Expect = 7e-10
Identities = 26/47 (55%), Positives = 36/47 (76%)
Frame = +3
Query: 144 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 284
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQG + ++G+ F
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
>BC066926-1|AAH66926.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 268 bits (658), Expect = 1e-71
Identities = 139/220 (63%), Positives = 161/220 (73%), Gaps = 4/220 (1%)
Frame = +1
Query: 226 LSTVPRXTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 405
L T + TKIAS+GLKGRVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHGMD
Sbjct: 48 LVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMD 104
Query: 406 LTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAI 585
LT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR I
Sbjct: 105 LTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQI 164
Query: 586 RKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIXPLRDVCIRKVKVLXKXRFE 765
RKKM EI+TR+V ++L+EVVNKLIPDSI KDIEKAC I PL DV +RKVK+L K +FE
Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFE 224
Query: 766 ISKLMELH----XXXXXXXXXXXXXXXRXXGYXPPVQXSV 873
+ KLMELH R GY PPVQ SV
Sbjct: 225 LGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264
Score = 64.1 bits (149), Expect = 7e-10
Identities = 26/47 (55%), Positives = 36/47 (76%)
Frame = +3
Query: 144 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 284
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQG + ++G+ F
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
>BC030161-1|AAH30161.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 268 bits (658), Expect = 1e-71
Identities = 139/220 (63%), Positives = 161/220 (73%), Gaps = 4/220 (1%)
Frame = +1
Query: 226 LSTVPRXTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 405
L T + TKIAS+GLKGRVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHGMD
Sbjct: 48 LVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMD 104
Query: 406 LTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAI 585
LT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR I
Sbjct: 105 LTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQI 164
Query: 586 RKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIXPLRDVCIRKVKVLXKXRFE 765
RKKM EI+TR+V ++L+EVVNKLIPDSI KDIEKAC I PL DV +RKVK+L K +FE
Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFE 224
Query: 766 ISKLMELH----XXXXXXXXXXXXXXXRXXGYXPPVQXSV 873
+ KLMELH R GY PPVQ SV
Sbjct: 225 LGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264
Score = 64.1 bits (149), Expect = 7e-10
Identities = 26/47 (55%), Positives = 36/47 (76%)
Frame = +3
Query: 144 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 284
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQG + ++G+ F
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
>BC019072-1|AAH19072.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 268 bits (658), Expect = 1e-71
Identities = 139/220 (63%), Positives = 161/220 (73%), Gaps = 4/220 (1%)
Frame = +1
Query: 226 LSTVPRXTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 405
L T + TKIAS+GLKGRVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHGMD
Sbjct: 48 LVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMD 104
Query: 406 LTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAI 585
LT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR I
Sbjct: 105 LTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQI 164
Query: 586 RKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIXPLRDVCIRKVKVLXKXRFE 765
RKKM EI+TR+V ++L+EVVNKLIPDSI KDIEKAC I PL DV +RKVK+L K +FE
Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFE 224
Query: 766 ISKLMELH----XXXXXXXXXXXXXXXRXXGYXPPVQXSV 873
+ KLMELH R GY PPVQ SV
Sbjct: 225 LGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264
Score = 64.1 bits (149), Expect = 7e-10
Identities = 26/47 (55%), Positives = 36/47 (76%)
Frame = +3
Query: 144 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 284
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQG + ++G+ F
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
>BC017123-1|AAH17123.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 268 bits (658), Expect = 1e-71
Identities = 139/220 (63%), Positives = 161/220 (73%), Gaps = 4/220 (1%)
Frame = +1
Query: 226 LSTVPRXTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 405
L T + TKIAS+GLKGRVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHGMD
Sbjct: 48 LVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMD 104
Query: 406 LTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAI 585
LT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR I
Sbjct: 105 LTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQI 164
Query: 586 RKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIXPLRDVCIRKVKVLXKXRFE 765
RKKM EI+TR+V ++L+EVVNKLIPDSI KDIEKAC I PL DV +RKVK+L K +FE
Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFE 224
Query: 766 ISKLMELH----XXXXXXXXXXXXXXXRXXGYXPPVQXSV 873
+ KLMELH R GY PPVQ SV
Sbjct: 225 LGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264
Score = 64.1 bits (149), Expect = 7e-10
Identities = 26/47 (55%), Positives = 36/47 (76%)
Frame = +3
Query: 144 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 284
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQG + ++G+ F
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
>BC009404-1|AAH09404.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 268 bits (658), Expect = 1e-71
Identities = 139/220 (63%), Positives = 161/220 (73%), Gaps = 4/220 (1%)
Frame = +1
Query: 226 LSTVPRXTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 405
L T + TKIAS+GLKGRVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHGMD
Sbjct: 48 LVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMD 104
Query: 406 LTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAI 585
LT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR I
Sbjct: 105 LTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQI 164
Query: 586 RKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIXPLRDVCIRKVKVLXKXRFE 765
RKKM EI+TR+V ++L+EVVNKLIPDSI KDIEKAC I PL DV +RKVK+L K +FE
Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFE 224
Query: 766 ISKLMELH----XXXXXXXXXXXXXXXRXXGYXPPVQXSV 873
+ KLMELH R GY PPVQ SV
Sbjct: 225 LGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264
Score = 64.1 bits (149), Expect = 7e-10
Identities = 26/47 (55%), Positives = 36/47 (76%)
Frame = +3
Query: 144 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 284
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQG + ++G+ F
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
>BC009219-1|AAH09219.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 268 bits (658), Expect = 1e-71
Identities = 139/220 (63%), Positives = 161/220 (73%), Gaps = 4/220 (1%)
Frame = +1
Query: 226 LSTVPRXTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 405
L T + TKIAS+GLKGRVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHGMD
Sbjct: 48 LVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMD 104
Query: 406 LTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAI 585
LT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR I
Sbjct: 105 LTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQI 164
Query: 586 RKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIXPLRDVCIRKVKVLXKXRFE 765
RKKM EI+TR+V ++L+EVVNKLIPDSI KDIEKAC I PL DV +RKVK+L K +FE
Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFE 224
Query: 766 ISKLMELH----XXXXXXXXXXXXXXXRXXGYXPPVQXSV 873
+ KLMELH R GY PPVQ SV
Sbjct: 225 LGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264
Score = 64.1 bits (149), Expect = 7e-10
Identities = 26/47 (55%), Positives = 36/47 (76%)
Frame = +3
Query: 144 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 284
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQG + ++G+ F
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
>BC006298-1|AAH06298.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 268 bits (658), Expect = 1e-71
Identities = 139/220 (63%), Positives = 161/220 (73%), Gaps = 4/220 (1%)
Frame = +1
Query: 226 LSTVPRXTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 405
L T + TKIAS+GLKGRVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHGMD
Sbjct: 48 LVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMD 104
Query: 406 LTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAI 585
LT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR I
Sbjct: 105 LTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQI 164
Query: 586 RKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIXPLRDVCIRKVKVLXKXRFE 765
RKKM EI+TR+V ++L+EVVNKLIPDSI KDIEKAC I PL DV +RKVK+L K +FE
Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFE 224
Query: 766 ISKLMELH----XXXXXXXXXXXXXXXRXXGYXPPVQXSV 873
+ KLMELH R GY PPVQ SV
Sbjct: 225 LGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264
Score = 64.1 bits (149), Expect = 7e-10
Identities = 26/47 (55%), Positives = 36/47 (76%)
Frame = +3
Query: 144 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 284
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQG + ++G+ F
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
>BC004981-1|AAH04981.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 268 bits (658), Expect = 1e-71
Identities = 139/220 (63%), Positives = 161/220 (73%), Gaps = 4/220 (1%)
Frame = +1
Query: 226 LSTVPRXTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 405
L T + TKIAS+GLKGRVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHGMD
Sbjct: 48 LVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMD 104
Query: 406 LTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAI 585
LT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR I
Sbjct: 105 LTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQI 164
Query: 586 RKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIXPLRDVCIRKVKVLXKXRFE 765
RKKM EI+TR+V ++L+EVVNKLIPDSI KDIEKAC I PL DV +RKVK+L K +FE
Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFE 224
Query: 766 ISKLMELH----XXXXXXXXXXXXXXXRXXGYXPPVQXSV 873
+ KLMELH R GY PPVQ SV
Sbjct: 225 LGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264
Score = 64.1 bits (149), Expect = 7e-10
Identities = 26/47 (55%), Positives = 36/47 (76%)
Frame = +3
Query: 144 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 284
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQG + ++G+ F
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
>BC001708-1|AAH01708.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 268 bits (658), Expect = 1e-71
Identities = 139/220 (63%), Positives = 161/220 (73%), Gaps = 4/220 (1%)
Frame = +1
Query: 226 LSTVPRXTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 405
L T + TKIAS+GLKGRVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHGMD
Sbjct: 48 LVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMD 104
Query: 406 LTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAI 585
LT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR I
Sbjct: 105 LTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQI 164
Query: 586 RKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIXPLRDVCIRKVKVLXKXRFE 765
RKKM EI+TR+V ++L+EVVNKLIPDSI KDIEKAC I PL DV +RKVK+L K +FE
Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFE 224
Query: 766 ISKLMELH----XXXXXXXXXXXXXXXRXXGYXPPVQXSV 873
+ KLMELH R GY PPVQ SV
Sbjct: 225 LGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264
Score = 64.1 bits (149), Expect = 7e-10
Identities = 26/47 (55%), Positives = 36/47 (76%)
Frame = +3
Query: 144 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 284
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQG + ++G+ F
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
>BC000204-1|AAH00204.1| 264|Homo sapiens ribosomal protein S3A
protein.
Length = 264
Score = 268 bits (658), Expect = 1e-71
Identities = 139/220 (63%), Positives = 161/220 (73%), Gaps = 4/220 (1%)
Frame = +1
Query: 226 LSTVPRXTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 405
L T + TKIAS+GLKGRVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHGMD
Sbjct: 48 LVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMD 104
Query: 406 LTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAI 585
LT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR I
Sbjct: 105 LTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQI 164
Query: 586 RKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIXPLRDVCIRKVKVLXKXRFE 765
RKKM EI+TR+V ++L+EVVNKLIPDSI KDIEKAC I PL DV +RKVK+L K +FE
Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFE 224
Query: 766 ISKLMELH----XXXXXXXXXXXXXXXRXXGYXPPVQXSV 873
+ KLMELH R GY PPVQ SV
Sbjct: 225 LGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQESV 264
Score = 64.1 bits (149), Expect = 7e-10
Identities = 26/47 (55%), Positives = 36/47 (76%)
Frame = +3
Query: 144 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 284
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQG + ++G+ F
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
>AB007148-1|BAA25814.1| 57|Homo sapiens ribosomal protein S3a
protein.
Length = 57
Score = 44.8 bits (101), Expect = 4e-04
Identities = 25/56 (44%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Frame = +1
Query: 709 PLRDVCIRKVKVLXKXRFEISKLMELH----XXXXXXXXXXXXXXXRXXGYXPPVQ 864
PL DV +RKVK+L K +FE+ KLMELH R GY PPVQ
Sbjct: 1 PLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYEPPVQ 56
>BC058900-1|AAH58900.1| 533|Homo sapiens RABEP2 protein protein.
Length = 533
Score = 32.3 bits (70), Expect = 2.5
Identities = 22/88 (25%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Frame = +1
Query: 526 KDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIP-DSIAKDIEKACHG 702
KDS+S + Q R +++ CE R++ L++++++ P DS+ K +EKA
Sbjct: 91 KDSISSYEAQITALKQERQQQQQDCEEKEREL--GRLKQLLSRAYPLDSLEKQMEKAHED 148
Query: 703 IXPLRDVCIRKVKVLXKXRFEISKLMEL 786
LR++ + K + + + ++ + EL
Sbjct: 149 SEKLREIVLPMEKEIEELKAKLLRAEEL 176
>BC027584-1|AAH27584.1| 369|Homo sapiens RABEP2 protein protein.
Length = 369
Score = 32.3 bits (70), Expect = 2.5
Identities = 22/88 (25%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Frame = +1
Query: 526 KDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIP-DSIAKDIEKACHG 702
KDS+S + Q R +++ CE R++ L++++++ P DS+ K +EKA
Sbjct: 91 KDSISSYEAQITALKQERQQQQQDCEEKEREL--GRLKQLLSRAYPLDSLEKQMEKAHED 148
Query: 703 IXPLRDVCIRKVKVLXKXRFEISKLMEL 786
LR++ + K + + + ++ + EL
Sbjct: 149 SEKLREIVLPMEKEIEELKAKLLRAEEL 176
>AK026935-1|BAB15594.1| 538|Homo sapiens protein ( Homo sapiens
cDNA: FLJ23282 fis, clone HEP07626. ).
Length = 538
Score = 32.3 bits (70), Expect = 2.5
Identities = 22/88 (25%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Frame = +1
Query: 526 KDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIP-DSIAKDIEKACHG 702
KDS+S + Q R +++ CE R++ L++++++ P DS+ K +EKA
Sbjct: 91 KDSISSYEAQITALKQERQQQQQDCEEKEREL--GRLKQLLSRAYPLDSLEKQMEKAHED 148
Query: 703 IXPLRDVCIRKVKVLXKXRFEISKLMEL 786
LR++ + K + + + ++ + EL
Sbjct: 149 SEKLREIVLPMEKEIEELKAKLLRAEEL 176
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,319,366
Number of Sequences: 237096
Number of extensions: 2518380
Number of successful extensions: 5978
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 5522
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5945
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11659288620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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