Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP27_F_J16
(902 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal pr... 276 3e-74
AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA, i... 276 3e-74
AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB, i... 267 2e-71
Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal prot... 257 2e-68
AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p pro... 204 1e-52
AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD, i... 193 2e-49
AE014298-2816|AAF48933.1| 1513|Drosophila melanogaster CG12359-P... 29 6.6
>AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal
protein S3a protein.
Length = 268
Score = 276 bits (676), Expect = 3e-74
Identities = 140/213 (65%), Positives = 160/213 (75%), Gaps = 5/213 (2%)
Frame = +1
Query: 250 KIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRW 429
+IAS+ LKGRVFEVSLADLQ D D ERSFRKFRLIAE VQ RNVLCNFHGMDLTTDK R
Sbjct: 56 RIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRS 115
Query: 430 MVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEII 609
MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR IR +M +II
Sbjct: 116 MVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDII 175
Query: 610 TRDVTNSELREVVNKLIPDSIAKDIEKACHGIXPLRDVCIRKVKVLXKXRFEISKLMELH 789
T +V+ ++L+++VNKL DSIAKDIEK+C I PL DV IRKVKVL K RF++SKL+ELH
Sbjct: 176 TNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELH 235
Query: 790 -----XXXXXXXXXXXXXXXRXXGYXPPVQXSV 873
R GY PPVQ +V
Sbjct: 236 GDGGGKSVEAVVSSEGAVIDRPEGYEPPVQEAV 268
Score = 69.7 bits (163), Expect = 5e-12
Identities = 29/47 (61%), Positives = 36/47 (76%)
Frame = +3
Query: 144 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 284
+VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG ++G+ F
Sbjct: 21 VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVF 67
>AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA,
isoform A protein.
Length = 268
Score = 276 bits (676), Expect = 3e-74
Identities = 140/213 (65%), Positives = 160/213 (75%), Gaps = 5/213 (2%)
Frame = +1
Query: 250 KIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRW 429
+IAS+ LKGRVFEVSLADLQ D D ERSFRKFRLIAE VQ RNVLCNFHGMDLTTDK R
Sbjct: 56 RIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRS 115
Query: 430 MVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEII 609
MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR IR +M +II
Sbjct: 116 MVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDII 175
Query: 610 TRDVTNSELREVVNKLIPDSIAKDIEKACHGIXPLRDVCIRKVKVLXKXRFEISKLMELH 789
T +V+ ++L+++VNKL DSIAKDIEK+C I PL DV IRKVKVL K RF++SKL+ELH
Sbjct: 176 TNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELH 235
Query: 790 -----XXXXXXXXXXXXXXXRXXGYXPPVQXSV 873
R GY PPVQ +V
Sbjct: 236 GDGGGKSVEAVVSSEGAVIDRPEGYEPPVQEAV 268
Score = 69.7 bits (163), Expect = 5e-12
Identities = 29/47 (61%), Positives = 36/47 (76%)
Frame = +3
Query: 144 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 284
+VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG ++G+ F
Sbjct: 21 VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVF 67
>AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB,
isoform B protein.
Length = 218
Score = 267 bits (654), Expect = 2e-71
Identities = 135/205 (65%), Positives = 153/205 (74%), Gaps = 5/205 (2%)
Frame = +1
Query: 274 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 453
GRVFEVSLADLQ D D ERSFRKFRLIAE VQ RNVLCNFHGMDLTTDK R MVKKWQTL
Sbjct: 14 GRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTL 73
Query: 454 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 633
IEA ++ KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR IR +M +IIT +V+ ++
Sbjct: 74 IEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGAD 133
Query: 634 LREVVNKLIPDSIAKDIEKACHGIXPLRDVCIRKVKVLXKXRFEISKLMELH-----XXX 798
L+++VNKL DSIAKDIEK+C I PL DV IRKVKVL K RF++SKL+ELH
Sbjct: 134 LKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKSV 193
Query: 799 XXXXXXXXXXXXRXXGYXPPVQXSV 873
R GY PPVQ +V
Sbjct: 194 EAVVSSEGAVIDRPEGYEPPVQEAV 218
>Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal protein
S3a protein.
Length = 270
Score = 257 bits (629), Expect = 2e-68
Identities = 128/182 (70%), Positives = 147/182 (80%), Gaps = 2/182 (1%)
Frame = +1
Query: 250 KIASEGLKGRVFEVSLA-DLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 426
+IAS+ KGRVFEVSL DLQ D D E SFRKFRLIAE VQ RNVLCNFHGMDLTTDK R
Sbjct: 56 RIASDYFKGRVFEVSLVPDLQKDIDPEHSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYR 115
Query: 427 WMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRK-KMCE 603
MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTCYA +QVR IR +M +
Sbjct: 116 SMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAHESQVRKIRSGRMTD 175
Query: 604 IITRDVTNSELREVVNKLIPDSIAKDIEKACHGIXPLRDVCIRKVKVLXKXRFEISKLME 783
IIT +V+ ++L+++VNKL DSIAKDIEK+C I PL DV IRKVKVL K RF++SKL+E
Sbjct: 176 IITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPRFDVSKLLE 235
Query: 784 LH 789
LH
Sbjct: 236 LH 237
Score = 68.9 bits (161), Expect = 9e-12
Identities = 29/47 (61%), Positives = 35/47 (74%)
Frame = +3
Query: 144 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 284
+VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG +G+ F
Sbjct: 21 VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYFKGRVF 67
>AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p
protein.
Length = 217
Score = 204 bits (499), Expect = 1e-52
Identities = 97/133 (72%), Positives = 113/133 (84%)
Frame = +1
Query: 250 KIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRW 429
+IAS+ LKGRVFEVSLADLQ D D ERSFRKFRLIAE VQ RNVLCNFHGMDLTTDK R
Sbjct: 56 RIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRS 115
Query: 430 MVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEII 609
MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR IR +M +II
Sbjct: 116 MVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDII 175
Query: 610 TRDVTNSELREVV 648
T +V+ ++L++++
Sbjct: 176 TNEVSGADLKQLL 188
Score = 69.7 bits (163), Expect = 5e-12
Identities = 29/47 (61%), Positives = 36/47 (76%)
Frame = +3
Query: 144 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 284
+VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG ++G+ F
Sbjct: 21 VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVF 67
>AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD,
isoform D protein.
Length = 163
Score = 193 bits (471), Expect = 2e-49
Identities = 98/163 (60%), Positives = 116/163 (71%), Gaps = 5/163 (3%)
Frame = +1
Query: 400 MDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVR 579
MDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR
Sbjct: 1 MDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVR 60
Query: 580 AIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIXPLRDVCIRKVKVLXKXR 759
IR +M +IIT +V+ ++L+++VNKL DSIAKDIEK+C I PL DV IRKVKVL K R
Sbjct: 61 KIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEKSCQRIYPLHDVYIRKVKVLKKPR 120
Query: 760 FEISKLMELH-----XXXXXXXXXXXXXXXRXXGYXPPVQXSV 873
F++SKL+ELH R GY PPVQ +V
Sbjct: 121 FDVSKLLELHGDGGGKSVEAVVSSEGAVIDRPEGYEPPVQEAV 163
>AE014298-2816|AAF48933.1| 1513|Drosophila melanogaster CG12359-PA
protein.
Length = 1513
Score = 29.5 bits (63), Expect = 6.6
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -2
Query: 322 RQCQLVDQPGKLRKLFPSILPKQFSXPWVRLT 227
+ C L+D P +LR FPS LP+ S P + LT
Sbjct: 163 QNCPLIDSPIRLR--FPSPLPEPPSLPTITLT 192
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,082,033
Number of Sequences: 53049
Number of extensions: 774000
Number of successful extensions: 2209
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2203
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4403028645
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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