Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_J15
         (889 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L25599-6|AAA28051.1|  213|Caenorhabditis elegans Hypothetical pr...   177   9e-45
Z95559-20|CAB63360.2|  263|Caenorhabditis elegans Hypothetical p...   128   5e-30
Z71177-2|CAA94867.1|  425|Caenorhabditis elegans Hypothetical pr...    32   0.63 
U42835-6|AAA83589.2|  816|Caenorhabditis elegans Dehydrogenases,...    30   2.5  
Z78065-3|CAB01517.2|  406|Caenorhabditis elegans Hypothetical pr...    29   5.9  
Z71177-9|CAA94868.2|  425|Caenorhabditis elegans Hypothetical pr...    29   5.9  

>L25599-6|AAA28051.1|  213|Caenorhabditis elegans Hypothetical
           protein F54H12.6 protein.
          Length = 213

 Score =  177 bits (431), Expect = 9e-45
 Identities = 97/199 (48%), Positives = 122/199 (61%), Gaps = 3/199 (1%)
 Frame = +2

Query: 134 PRXLNDLNQYLAEKSYVSGYTPSQADVQVFEQVGKAP-AANLPHVLRWYNQIASYTSAER 310
           P  L   N  LAE+++ +G+  S  D Q+F  +G AP A+  P+V RWY  +ASYT AER
Sbjct: 8   PAGLAAFNTTLAEQAFATGFVLSGEDAQLFAALGSAPNASTYPNVARWYANVASYTDAER 67

Query: 311 KTWSQ--GTSPLXXXXXXXXXXXXXXXXXXXXVDLFGSGXXXXXXXXXXXXXXXLKAYAD 484
           KTW+   G++P                      DLFGS                L AYA+
Sbjct: 68  KTWASAGGSAPAAAAADGDDF------------DLFGSDDEEEDAEKAKIVEERLAAYAE 115

Query: 485 KKSKKPALIAKSSILLDVKPWDDETDMKEMENQVRTIEMEGLLWGASKLVPVGYGINKLQ 664
           KK+KK   IAKSS++LDVKPWDDETD+ EME  VR+IEM+GL+WG +KL+P+GYGI KLQ
Sbjct: 116 KKAKKAGPIAKSSVILDVKPWDDETDLGEMEKLVRSIEMDGLVWGGAKLIPIGYGIKKLQ 175

Query: 665 IMCVIEDDKVSVDLLTEKI 721
           I+ VIED KVSVD L EKI
Sbjct: 176 IITVIEDLKVSVDDLIEKI 194



 Score = 31.9 bits (69), Expect = 0.63
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = +3

Query: 726 NFEDFVQSVDIAAFNKI 776
           +FED VQSVDI AFNKI
Sbjct: 197 DFEDHVQSVDIVAFNKI 213


>Z95559-20|CAB63360.2|  263|Caenorhabditis elegans Hypothetical
           protein Y41E3.10a protein.
          Length = 263

 Score =  128 bits (309), Expect = 5e-30
 Identities = 64/106 (60%), Positives = 75/106 (70%)
 Frame = +2

Query: 404 DLFGSGXXXXXXXXXXXXXXXLKAYADKKSKKPALIAKSSILLDVKPWDDETDMKEMENQ 583
           DLFGS                L AYA KK+ K   IAKSS++LDVKPWDDETD+ EME  
Sbjct: 139 DLFGSEDEEEDEEKKKVVEERLAAYAAKKATKAGPIAKSSVILDVKPWDDETDLGEMEKL 198

Query: 584 VRTIEMEGLLWGASKLVPVGYGINKLQIMCVIEDDKVSVDLLTEKI 721
           VR+IEM+GL+WG +KL+P+GYGI KLQI+ VIED KVSVD L EKI
Sbjct: 199 VRSIEMDGLVWGGAKLIPIGYGIKKLQIITVIEDLKVSVDDLIEKI 244



 Score = 31.9 bits (69), Expect = 0.63
 Identities = 14/17 (82%), Positives = 15/17 (88%)
 Frame = +3

Query: 726 NFEDFVQSVDIAAFNKI 776
           +FED VQSVDI AFNKI
Sbjct: 247 DFEDHVQSVDIVAFNKI 263


>Z71177-2|CAA94867.1|  425|Caenorhabditis elegans Hypothetical
           protein AC3.3 protein.
          Length = 425

 Score = 31.9 bits (69), Expect = 0.63
 Identities = 17/53 (32%), Positives = 27/53 (50%)
 Frame = -3

Query: 326 PETMFCVQPKCMKQFDYTIVVRGEG*RPAPCQLAQILEHQLEKECIQTRSFSQ 168
           P  + C QP CM   + + VV+     PAP Q     + Q +++C+QT+   Q
Sbjct: 124 PAPVQC-QPSCMPACEQSCVVQ----TPAPVQCVPQCQQQCQQQCVQTQPIQQ 171


>U42835-6|AAA83589.2|  816|Caenorhabditis elegans Dehydrogenases,
           short chain protein27 protein.
          Length = 816

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 22/66 (33%), Positives = 32/66 (48%)
 Frame = +2

Query: 521 SILLDVKPWDDETDMKEMENQVRTIEMEGLLWGASKLVPVGYGINKLQIMCVIEDDKVSV 700
           SI+L VKP DDE  ++++ NQ     M G LW A++     Y   ++     I    V V
Sbjct: 436 SIMLCVKPADDEI-VQKIRNQ-----MSGALWSAAQFAVTSYVCVRVLKFLYIMCKSVLV 489

Query: 701 DLLTEK 718
             +T K
Sbjct: 490 HFITPK 495


>Z78065-3|CAB01517.2|  406|Caenorhabditis elegans Hypothetical
           protein T09E8.4 protein.
          Length = 406

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 1/117 (0%)
 Frame = -1

Query: 571 FLHIGFIIPWLDIKENRGLGNESWFLRLLV-SICFQTFFSNSFSFCILFLVTRTK*INVV 395
           FL+I  I     +K++    NE   +R+LV +I    FF  S S   +FL+ +T   N  
Sbjct: 291 FLYIAVIFKIFAMKKSTLNKNE---IRVLVQAIVIFVFFQASSS---VFLICQTIAFNTA 344

Query: 394 VIVVFRCWGGSRGFSTGGQWAGALRPCFAFSRSV*SNLIIPS*YVGKVSGRRLANLL 224
              V +     R  +T   +AGA  PCF+F  S     ++ S  +  VS +  +NL+
Sbjct: 345 TAFVIK-----RIINTLEIFAGAATPCFSFFTSKEIRKLLSS-KIAAVSSQGSSNLV 395


>Z71177-9|CAA94868.2|  425|Caenorhabditis elegans Hypothetical
           protein AC3.4 protein.
          Length = 425

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 16/53 (30%), Positives = 26/53 (49%)
 Frame = -3

Query: 326 PETMFCVQPKCMKQFDYTIVVRGEG*RPAPCQLAQILEHQLEKECIQTRSFSQ 168
           P  + C QP CM   + + VV+     PA  Q     + Q +++C+QT+   Q
Sbjct: 124 PAPVQC-QPSCMPACEQSCVVQ----TPAAVQCVPQCQQQCQQQCVQTQPIQQ 171


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,362,546
Number of Sequences: 27780
Number of extensions: 348620
Number of successful extensions: 983
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 927
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 982
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)