Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_J11
         (831 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z72512-2|CAA96664.1|  322|Caenorhabditis elegans Hypothetical pr...    29   4.1  
Z81565-5|CAB04583.1|  332|Caenorhabditis elegans Hypothetical pr...    28   7.1  
Z70267-8|CAA94216.1|  332|Caenorhabditis elegans Hypothetical pr...    28   7.1  
Z92838-2|CAB07408.1|  211|Caenorhabditis elegans Hypothetical pr...    28   9.4  

>Z72512-2|CAA96664.1|  322|Caenorhabditis elegans Hypothetical
           protein R07B5.4 protein.
          Length = 322

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 26/101 (25%), Positives = 37/101 (36%), Gaps = 1/101 (0%)
 Frame = +3

Query: 201 YNVNEINYEAEYYKVAQDFNIEASKDCYTNMKAYENFMMMYKVG-FLPKNLEFSIFYEKM 377
           Y  N I+   EYY  A  FNI       T      +F +  K+  F  KN    +    +
Sbjct: 4   YGFNPIDNLPEYYNFAYSFNILTIFTIVTATYTIFSFGVTLKMCIFYLKNRNSDVLKSGL 63

Query: 378 REEAIALFKLFYYXQRFEMFLQNSMLRXXXHEPXEFXFTPY 500
           R +   +F L      F + L   ++R     P    FT Y
Sbjct: 64  RADVFRIFLLMQLWNAFHVLLDFLVVRI----PLTSIFTSY 100


>Z81565-5|CAB04583.1|  332|Caenorhabditis elegans Hypothetical
           protein K04C1.6 protein.
          Length = 332

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
 Frame = -2

Query: 284 VAVLAGLDVEVLGDFVVLSFIVDLV----NVVEKRQNLLLLFDERSVNRCC 144
           + +  GL  +      +LS+IV L+    + +   Q LLLLF  ++V RCC
Sbjct: 248 IIIACGLSFKSESTDEILSWIVILIPFASDALTLTQPLLLLFFSKTVRRCC 298


>Z70267-8|CAA94216.1|  332|Caenorhabditis elegans Hypothetical
           protein K04C1.6 protein.
          Length = 332

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
 Frame = -2

Query: 284 VAVLAGLDVEVLGDFVVLSFIVDLV----NVVEKRQNLLLLFDERSVNRCC 144
           + +  GL  +      +LS+IV L+    + +   Q LLLLF  ++V RCC
Sbjct: 248 IIIACGLSFKSESTDEILSWIVILIPFASDALTLTQPLLLLFFSKTVRRCC 298


>Z92838-2|CAB07408.1|  211|Caenorhabditis elegans Hypothetical
           protein T03D8.3 protein.
          Length = 211

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 16/33 (48%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
 Frame = -2

Query: 302 VGFHVCVAVLAGLDVEVLGDFVVLS-FIVDLVN 207
           V F V VA + GLD+E  GDFV+ S   +DL++
Sbjct: 8   VFFTVGVAAIYGLDLENAGDFVLPSGDFIDLIS 40


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,694,123
Number of Sequences: 27780
Number of extensions: 224231
Number of successful extensions: 528
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 513
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 528
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2061488408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)