Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_J10
         (847 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X70944-1|CAA50283.1|  707|Homo sapiens PTB-associated splicing f...    33   1.7  
BC051192-1|AAH51192.1|  707|Homo sapiens splicing factor proline...    33   1.7  
BC027708-1|AAH27708.1|  525|Homo sapiens SFPQ protein protein.         33   1.7  
AL590434-2|CAI12467.1|  707|Homo sapiens splicing factor proline...    33   1.7  
BC039084-1|AAH39084.1|  647|Homo sapiens dihydrolipoamide S-acet...    31   5.3  
AK223596-1|BAD97316.1|  647|Homo sapiens dihydrolipoamide S-acet...    31   6.9  
AF317200-1|AAG31658.1|  103|Homo sapiens pyruvate dehydrogenase ...    31   6.9  

>X70944-1|CAA50283.1|  707|Homo sapiens PTB-associated splicing
           factor protein.
          Length = 707

 Score = 32.7 bits (71), Expect = 1.7
 Identities = 16/30 (53%), Positives = 16/30 (53%)
 Frame = -2

Query: 687 GGGGGGFXXXGXXKXGGXXGGXKXFFXPPP 598
           GGGGGGF   G    GG  GG   F  PPP
Sbjct: 10  GGGGGGFHRRGG---GGGRGGLHDFRSPPP 36


>BC051192-1|AAH51192.1|  707|Homo sapiens splicing factor
           proline/glutamine-rich (polypyrimidine tract binding
           protein as protein.
          Length = 707

 Score = 32.7 bits (71), Expect = 1.7
 Identities = 16/30 (53%), Positives = 16/30 (53%)
 Frame = -2

Query: 687 GGGGGGFXXXGXXKXGGXXGGXKXFFXPPP 598
           GGGGGGF   G    GG  GG   F  PPP
Sbjct: 10  GGGGGGFHRRGG---GGGRGGLHDFRSPPP 36


>BC027708-1|AAH27708.1|  525|Homo sapiens SFPQ protein protein.
          Length = 525

 Score = 32.7 bits (71), Expect = 1.7
 Identities = 16/30 (53%), Positives = 16/30 (53%)
 Frame = -2

Query: 687 GGGGGGFXXXGXXKXGGXXGGXKXFFXPPP 598
           GGGGGGF   G    GG  GG   F  PPP
Sbjct: 10  GGGGGGFHRRGG---GGGRGGLHDFRSPPP 36


>AL590434-2|CAI12467.1|  707|Homo sapiens splicing factor
           proline/glutamine-rich (polypyrimidine tract binding
           protein as protein.
          Length = 707

 Score = 32.7 bits (71), Expect = 1.7
 Identities = 16/30 (53%), Positives = 16/30 (53%)
 Frame = -2

Query: 687 GGGGGGFXXXGXXKXGGXXGGXKXFFXPPP 598
           GGGGGGF   G    GG  GG   F  PPP
Sbjct: 10  GGGGGGFHRRGG---GGGRGGLHDFRSPPP 36


>BC039084-1|AAH39084.1|  647|Homo sapiens dihydrolipoamide
           S-acetyltransferase (E2 component of pyruvate
           dehydrogenase co protein.
          Length = 647

 Score = 31.1 bits (67), Expect = 5.3
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = -2

Query: 330 GTPRWXLNGGPAPPKLFXKXTPFGGKXFLKGWXXNS 223
           GTPR     GPAP +     T +GG   L GW  +S
Sbjct: 30  GTPRVTSRSGPAPARRNSVTTGYGGVRALCGWTPSS 65


>AK223596-1|BAD97316.1|  647|Homo sapiens dihydrolipoamide
           S-acetyltransferase (E2 component of pyruvate
           dehydrogenase co protein.
          Length = 647

 Score = 30.7 bits (66), Expect = 6.9
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = -2

Query: 330 GTPRWXLNGGPAPPKLFXKXTPFGGKXFLKGWXXNS 223
           GTPR     GPAP +     T +GG   L GW  +S
Sbjct: 30  GTPRVTSRSGPAPVRRNSVTTGYGGVRALCGWTPSS 65


>AF317200-1|AAG31658.1|  103|Homo sapiens pyruvate dehydrogenase
           complex component E2 precursor protein.
          Length = 103

 Score = 30.7 bits (66), Expect = 6.9
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = -2

Query: 330 GTPRWXLNGGPAPPKLFXKXTPFGGKXFLKGWXXNS 223
           GTPR     GPAP +     T +GG   L GW  +S
Sbjct: 30  GTPRVTSRSGPAPVRRNSVTTGYGGVRALCGWTPSS 65


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,847,148
Number of Sequences: 237096
Number of extensions: 1910876
Number of successful extensions: 3941
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3616
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10705443456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)