Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_J10
         (847 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024809-7|AAF59540.1|  315|Caenorhabditis elegans Hypothetical ...    31   0.78 
Z78413-7|CAB01657.1|  352|Caenorhabditis elegans Hypothetical pr...    30   1.8  
AF067612-1|AAD36954.1|  780|Caenorhabditis elegans Egg laying de...    29   5.5  
Z77662-14|CAI79239.1|  245|Caenorhabditis elegans Hypothetical p...    28   9.6  
U53153-1|AAC69039.4|  715|Caenorhabditis elegans Hypothetical pr...    28   9.6  

>AC024809-7|AAF59540.1|  315|Caenorhabditis elegans Hypothetical
           protein Y53G8AR.9 protein.
          Length = 315

 Score = 31.5 bits (68), Expect = 0.78
 Identities = 16/33 (48%), Positives = 16/33 (48%)
 Frame = -2

Query: 696 FXXGGGGGGFXXXGXXKXGGXXGGXKXFFXPPP 598
           F  GGGGGG    G    GG  GG   F  PPP
Sbjct: 186 FGPGGGGGGMGGGGGS--GGSGGGSGRFPPPPP 216


>Z78413-7|CAB01657.1|  352|Caenorhabditis elegans Hypothetical
           protein T01C3.7 protein.
          Length = 352

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 13/26 (50%), Positives = 13/26 (50%)
 Frame = -2

Query: 702 PXFXXGGGGGGFXXXGXXKXGGXXGG 625
           P F  GGGGGGF        GG  GG
Sbjct: 4   PEFNRGGGGGGFRGGRGGDRGGSRGG 29


>AF067612-1|AAD36954.1|  780|Caenorhabditis elegans Egg laying
           defective protein 4,isoform a protein.
          Length = 780

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = -2

Query: 687 GGGGGGFXXXGXXKXGGXXGGXKXFF 610
           GGGGG     G    GG  GG + FF
Sbjct: 13  GGGGGASGGAGGGAPGGGGGGIRGFF 38


>Z77662-14|CAI79239.1|  245|Caenorhabditis elegans Hypothetical
           protein F47B8.13 protein.
          Length = 245

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 13/33 (39%), Positives = 14/33 (42%)
 Frame = -2

Query: 696 FXXGGGGGGFXXXGXXKXGGXXGGXKXFFXPPP 598
           +  GGGGGG    G     G  GG      PPP
Sbjct: 9   YASGGGGGGGGGGGGGGEAGYSGGAGVEAPPPP 41


>U53153-1|AAC69039.4|  715|Caenorhabditis elegans Hypothetical
           protein T19A5.3a protein.
          Length = 715

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 12/23 (52%), Positives = 12/23 (52%)
 Frame = -2

Query: 696 FXXGGGGGGFXXXGXXKXGGXXG 628
           F  GGGGGGF   G    GG  G
Sbjct: 480 FGGGGGGGGFGGGGGGFGGGGGG 502


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,647,929
Number of Sequences: 27780
Number of extensions: 245749
Number of successful extensions: 638
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 344
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 583
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2098003600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)