Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP27_F_J07
(873 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 198 8e-52
SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr 2... 53 6e-08
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 46 9e-06
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 44 3e-05
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 42 9e-05
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 41 3e-04
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 40 6e-04
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 39 0.001
SPAC823.10c |||mitochondrial carrier with solute carrier repeats... 38 0.002
SPBC29A3.11c |||mitochondrial carboxylic acid transporter|Schizo... 33 0.040
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 31 0.16
SPAC12B10.09 |||S-adenosylmethionine transporter |Schizosaccharo... 31 0.28
SPBC1271.11 |||tricarboxylate transporter |Schizosaccharomyces p... 31 0.28
SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces p... 30 0.37
SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|ch... 29 0.86
SPAC2F7.08c |snf5||chromatin remodeling complex subunit Snf5 |Sc... 29 1.1
SPBC83.13 |||mitochondrial tricarboxylic acid transporter|Schizo... 28 1.5
SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr... 28 1.5
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 28 1.5
SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier homolog|Schizosaccha... 27 4.6
SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharo... 27 4.6
SPBC428.08c |clr4||histone H3 methyltransferase Clr4|Schizosacch... 26 6.1
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 26 8.1
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 198 bits (483), Expect = 8e-52
Identities = 94/185 (50%), Positives = 124/185 (67%), Gaps = 1/185 (0%)
Frame = +2
Query: 254 AVPTESCEFGSPKYFAXXXXXXXXXXXXTHTAVVPLDLVKCRLQVDAEKYKNVVNGFKVS 433
A P ++ + +P+Y+ TH+A+ PLDL+KCR QV+ Y + GFK
Sbjct: 9 APPKKTLQLYTPQYYGLCTLGGLLACGTTHSAITPLDLIKCRKQVNPNIYPGNIAGFKTI 68
Query: 434 VREEGVRGLAKGWAPTFIGYSMQGLCKFGFYEVFKVAYAGMLDDETAYTYRTFVYLAASA 613
+ +EG+RGL G PT IGYS+QG K+GFYE+FK Y+ ++ + A+ YRT +YLAASA
Sbjct: 69 LSKEGLRGLYTGGMPTLIGYSLQGCGKYGFYELFKHKYSTLVGAQKAHEYRTSIYLAASA 128
Query: 614 SAEFIADIALSPMEAAKVRIQTM-PGFASTLREAWPKMVKNXGYGTFYKGLVPLWGKXIP 790
SAE +ADI L PMEA KVR+QT P FA+T REAW K+V N G+GT Y+GL PLW + IP
Sbjct: 129 SAELLADIMLCPMEAIKVRVQTSNPRFANTTREAWSKIVTNEGFGTLYRGLAPLWFRQIP 188
Query: 791 YTMNK 805
YTM K
Sbjct: 189 YTMMK 193
>SPBC27B12.09c |||FAD transporter|Schizosaccharomyces pombe|chr
2|||Manual
Length = 277
Score = 52.8 bits (121), Expect = 6e-08
Identities = 40/147 (27%), Positives = 70/147 (47%)
Frame = +2
Query: 356 PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYEVF 535
P+ +VK R+ Y N GF ++ EG+RG G+AP+ +G S QG +F YE
Sbjct: 118 PIWVVKSRILSKRVNYTNPFFGFYDLIKNEGLRGCYAGFAPSLLGVS-QGALQFMAYEKL 176
Query: 536 KVAYAGMLDDETAYTYRTFVYLAASASAEFIADIALSPMEAAKVRIQTMPGFASTLREAW 715
K L + T ++++ SA+++ A + + P+ + R+Q M ++
Sbjct: 177 K------LWKQRRPTSLDYIFM--SAASKVFAAVNMYPLLVIRTRLQVMRSPHRSIMNLV 228
Query: 716 PKMVKNXGYGTFYKGLVPLWGKXIPYT 796
+ + G FYKG +P + +P T
Sbjct: 229 LQTWRLQGILGFYKGFLPHLLRVVPQT 255
Score = 31.5 bits (68), Expect = 0.16
Identities = 17/58 (29%), Positives = 30/58 (51%)
Frame = +2
Query: 356 PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYE 529
PL +++ RLQV +++++N + R +G+ G KG+ P + Q F YE
Sbjct: 206 PLLVIRTRLQVMRSPHRSIMNLVLQTWRLQGILGFYKGFLPHLLRVVPQTCITFLVYE 263
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 45.6 bits (103), Expect = 9e-06
Identities = 40/148 (27%), Positives = 63/148 (42%), Gaps = 8/148 (5%)
Frame = +2
Query: 350 VVPLDLVKCRLQ--VDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGF 523
VVP +L+K RLQ +A KY V+ F V++E + L G+ T + + FG
Sbjct: 122 VVPFELMKIRLQDVKNASKYNGTVDCFTKIVKQERILALYNGFEATMWRHVVWNAGYFGV 181
Query: 524 YEVFKVAYAGMLDDETAYTYRTFVYLAASASAEFIADIALSPMEAAKVRIQTMPGFASTL 703
+ + L ++ L A +P + K RIQT+P A +
Sbjct: 182 IQKIR----NSLTPASSRIGEIRNNLIAGTIGGIFGTFLSTPFDVIKSRIQTVPRIAGQV 237
Query: 704 RE---AWPKMV---KNXGYGTFYKGLVP 769
+ A+P +V + G+ YKG VP
Sbjct: 238 PKYNWAYPALVTVAREEGFTALYKGFVP 265
Score = 35.1 bits (77), Expect = 0.013
Identities = 31/145 (21%), Positives = 59/145 (40%), Gaps = 5/145 (3%)
Frame = +2
Query: 356 PLDLVKCRLQVDAEK--YKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYE 529
PLD+VK R+Q+ K Y + K V+ EG L +G P + + + KF +
Sbjct: 28 PLDVVKTRMQLSVGKSDYNGTFDCLKKIVKNEGPHRLYRGILPPILMEAPKRALKFASND 87
Query: 530 VFKVAYAGMLDDETAYTYRTFVYLAASASAEFIADIALSPMEAAKVRIQTMPGFA--STL 703
+ + + + + + + + A F + P E K+R+Q + + +
Sbjct: 88 TYSKLWRKVFKRKDS---SPALSILTGSCAGFTETFVVVPFELMKIRLQDVKNASKYNGT 144
Query: 704 REAWPKMVKNXGYGTFYKGL-VPLW 775
+ + K+VK Y G +W
Sbjct: 145 VDCFTKIVKQERILALYNGFEATMW 169
Score = 30.3 bits (65), Expect = 0.37
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +2
Query: 593 VYLAASASAEFIADIALSPMEAAKVRIQTMPGFA--STLREAWPKMVKNXGYGTFYKGLV 766
V AA A A + L P++ K R+Q G + + + K+VKN G Y+G++
Sbjct: 10 VTFAAGAVAGISEVLTLYPLDVVKTRMQLSVGKSDYNGTFDCLKKIVKNEGPHRLYRGIL 69
Query: 767 P 769
P
Sbjct: 70 P 70
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 44.0 bits (99), Expect = 3e-05
Identities = 33/122 (27%), Positives = 54/122 (44%), Gaps = 10/122 (8%)
Frame = +2
Query: 344 TAVVPLDLVKCRLQV-------DAEK--YKNVVNGFKVSVREEGVRGLAKGWAPTFIGYS 496
T P +++K R Q+ D K YK+V F + R EG+RGL +G ++
Sbjct: 39 TLTNPFEVIKTRFQLQGQLTKLDPSKRIYKSVGQAFSLIARHEGIRGLQRGLGTAYVYQI 98
Query: 497 MQGLCKFGFYE-VFKVAYAGMLDDETAYTYRTFVYLAASASAEFIADIALSPMEAAKVRI 673
C+ GFYE + + LDD + + +A+ A + + SP K R+
Sbjct: 99 CLNGCRLGFYEPIRRTLNTWFLDDPKG--NKLAINVASGAGSGLCGALFGSPFFLVKTRM 156
Query: 674 QT 679
Q+
Sbjct: 157 QS 158
Score = 27.9 bits (59), Expect = 2.0
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 8/46 (17%)
Frame = +2
Query: 356 PLDLVKCRLQVDAEK--------YKNVVNGFKVSVREEGVRGLAKG 469
P LVK R+Q + K YK++ N F ++E GV+GL G
Sbjct: 148 PFFLVKTRMQSYSPKFPVGQQYGYKHIFNAFSRIIKENGVKGLFVG 193
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 42.3 bits (95), Expect = 9e-05
Identities = 40/165 (24%), Positives = 60/165 (36%), Gaps = 4/165 (2%)
Frame = +2
Query: 341 HTAVVPLDLVKCRLQ----VDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGL 508
H+ + P+D +K R+Q V N+VN EGV L +G + +G
Sbjct: 34 HSVMYPVDAIKTRMQMLNGVSRSVSGNIVNSVIKISSTEGVYSLWRGISSVIMGAGPSHA 93
Query: 509 CKFGFYEVFKVAYAGMLDDETAYTYRTFVYLAASASAEFIADIALSPMEAAKVRIQTMPG 688
F E FK D R A A A I+D ++P + K R+Q
Sbjct: 94 IYFSVLEFFKSKINASPD-------RPLASALAGACAITISDAFMTPFDVIKQRMQLPSR 146
Query: 689 FASTLREAWPKMVKNXGYGTFYKGLVPLWGKXIPYTMNKICLLRT 823
+ + +N G G FY IP+T ++ T
Sbjct: 147 KYKSALHCATTVFRNEGLGAFYISYPTCIAMSIPFTAIQVATYDT 191
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 40.7 bits (91), Expect = 3e-04
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Frame = +2
Query: 338 THTAVVPLDLVKCRLQVD-----AEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQ 502
T A P+ LVK RLQ+D A +Y++ ++ ++R EG RGL KG + + +G +
Sbjct: 176 TSAATNPIWLVKTRLQLDKKSGQAAQYRSSIDCIIKTIRLEGFRGLYKGLSASLLGVG-E 234
Query: 503 GLCKFGFYEVFKVAYA 550
++ YE FK A A
Sbjct: 235 STLQWVLYEKFKHAVA 250
Score = 26.2 bits (55), Expect = 6.1
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +2
Query: 398 KYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYEV 532
KY ++ FK+ E+G+ GL G + FG YEV
Sbjct: 311 KYTGLIQCFKLVWMEQGIVGLYGGLTAHLLRVVPNACILFGSYEV 355
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 39.5 bits (88), Expect = 6e-04
Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 5/135 (3%)
Frame = +2
Query: 401 YKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYEVFKVAYAGMLDDETAYT 580
Y N + F+ + EG+ +G P+ G G+ +F YE FK LDD
Sbjct: 230 YNNTFDAFRKIYKYEGLAAFYRGLFPSLFGTLHVGI-QFPLYEYFK----SFLDDFFGKK 284
Query: 581 YRTFVYLAASASAEFIADIALSPMEAAKVRIQTM--PGFAST---LREAWPKMVKNXGYG 745
+ LAA+ S + A P E + R+Q++ P S +R+ W ++ G+
Sbjct: 285 SNFHIVLAATLS-KIAASTVTYPHEVLRTRLQSLDAPTHNSATLLIRDIW----RSEGWR 339
Query: 746 TFYKGLVPLWGKXIP 790
+Y G+ + + IP
Sbjct: 340 KYYSGMATNFIRTIP 354
Score = 33.9 bits (74), Expect = 0.030
Identities = 28/77 (36%), Positives = 35/77 (45%), Gaps = 11/77 (14%)
Frame = +2
Query: 350 VVPLDLVKCRLQVDAEKY-----KN--VVNGFKVSVR----EEGVRGLAKGWAPTFIGYS 496
V PLD+VK R Q Y KN V+ G S+R EG+ GL +G P +GY
Sbjct: 23 VAPLDVVKTRKQAQKAFYSTGGGKNTMVLGGTLSSMRTIFHNEGIAGLYRGVGPMMLGYL 82
Query: 497 MQGLCKFGFYEVFKVAY 547
F YE KV +
Sbjct: 83 PSWSIYFVVYEKCKVLF 99
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 38.7 bits (86), Expect = 0.001
Identities = 39/172 (22%), Positives = 74/172 (43%), Gaps = 12/172 (6%)
Frame = +2
Query: 281 GSPKYFAXXXXXXXXXXXXTHTAVVPLDLVKCRLQVDAE--------KYKNVVNGFKVSV 436
G K+FA + V LD + RL DA+ ++ +V+ ++ +
Sbjct: 127 GYAKWFAGNLASGGAAGAASLLFVYSLDYARTRLANDAKSAKKGGERQFNGLVDVYRKTY 186
Query: 437 REEGVRGLAKGWAPTFIGYSMQGLCKFGFYEVFK-VAYAGMLDDETAYTYRTFVYLAASA 613
R +G+RGL +G+ P+ +G + FG Y+ K V G L+ ++ + +
Sbjct: 187 RSDGLRGLYRGFGPSVVGIVVYRGLYFGMYDTLKPVVLVGPLEGNFLASF-LLGWAVTTG 245
Query: 614 SAEFIADIALSPMEAAKVRIQTMPGFA---STLREAWPKMVKNXGYGTFYKG 760
S +A P++ + R+ G A S+ E +++ G +F+KG
Sbjct: 246 SG-----VASYPLDTIRRRMMMTSGEAVKYSSSFECGRQILAKEGARSFFKG 292
Score = 30.7 bits (66), Expect = 0.28
Identities = 29/119 (24%), Positives = 49/119 (41%), Gaps = 9/119 (7%)
Frame = +2
Query: 344 TAVVPLDLVKCRLQVDAE---------KYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYS 496
TA P++ VK +Q E +YK + FK + EEGV L +G + Y
Sbjct: 43 TAAAPIERVKLLIQNQDEMIRAGRLSHRYKGIGECFKRTAAEEGVISLWRGNTANVLRYF 102
Query: 497 MQGLCKFGFYEVFKVAYAGMLDDETAYTYRTFVYLAASASAEFIADIALSPMEAAKVRI 673
F F + FK + G + Y LA+ +A + + + ++ A+ R+
Sbjct: 103 PTQALNFAFKDKFKKMF-GYKKERDGYAKWFAGNLASGGAAGAASLLFVYSLDYARTRL 160
>SPAC823.10c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 296
Score = 37.9 bits (84), Expect = 0.002
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +2
Query: 338 THTAVV-PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCK 514
T TA+ P D++K R+Q++ YKN ++ K+ EG RG G+ + S+
Sbjct: 223 TATAITNPFDMLKTRVQLEPHIYKNFLHSAKLVYANEGFRGFLDGFFLRVLRKSISSTIT 282
Query: 515 FGFYE 529
+ YE
Sbjct: 283 WSVYE 287
>SPBC29A3.11c |||mitochondrial carboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 33.5 bits (73), Expect = 0.040
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +2
Query: 356 PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYEVF 535
PLD +K R Q + + + F+ +V+ EG++GL +G I ++ F Y+
Sbjct: 37 PLDSIKVRQQT--YNFPTIRSCFQNAVKNEGLKGLYRGLTLPLISATLSRSVSFTVYDSL 94
Query: 536 KVAYA 550
K+ +A
Sbjct: 95 KLTFA 99
Score = 29.9 bits (64), Expect = 0.49
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +2
Query: 602 AASASAEFIADIALSPMEAAKVRIQTMPGFASTLREAWPKMVKNXGYGTFYKGL-VPL 772
+A+ + I+++ P+++ KVR QT F T+R + VKN G Y+GL +PL
Sbjct: 22 SAALVSSAISNVIGYPLDSIKVRQQTY-NFP-TIRSCFQNAVKNEGLKGLYRGLTLPL 77
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 31.5 bits (68), Expect = 0.16
Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Frame = +2
Query: 347 AVVPLDLVKCRLQVDA----EKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCK 514
A P D+VK ++Q D YKN K + G+RG +G+ P + +
Sbjct: 229 AAYPFDIVKSKIQTDGFLSKATYKNSWQCAKGIYTKAGLRGFYRGFVPVLVRAAPANAVT 288
Query: 515 FGFYE 529
F YE
Sbjct: 289 FYVYE 293
>SPAC12B10.09 |||S-adenosylmethionine transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 345
Score = 30.7 bits (66), Expect = 0.28
Identities = 35/151 (23%), Positives = 56/151 (37%)
Frame = +2
Query: 347 AVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFY 526
++ P+D +K RLQ GF V+ G G+ +G +G + F Y
Sbjct: 99 SLFPIDTLKTRLQAKG--------GF---VKNGGFHGVYRGLGSILVGSAPGASLFFTTY 147
Query: 527 EVFKVAYAGMLDDETAYTYRTFVYLAASASAEFIADIALSPMEAAKVRIQTMPGFASTLR 706
E K L +++ +++ E A I P E K R Q G S+
Sbjct: 148 ENMK----SRLSQSGLGLSDPQIHMCSASLGEIAACIVRVPTEVIKQRAQASGGTLSSRN 203
Query: 707 EAWPKMVKNXGYGTFYKGLVPLWGKXIPYTM 799
+ N + FY G + IP+T+
Sbjct: 204 ILQTILKSNNVWRDFYAGYGITIAREIPFTL 234
Score = 28.7 bits (61), Expect = 1.1
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = +2
Query: 590 FVYLAASASAEFIADIALSPMEAAKVRIQTMPGFASTLREAWPKMVKNXGYGTFYKGL 763
F L A A D++L P++ K R+Q GF VKN G+ Y+GL
Sbjct: 83 FEALGAGICAGLAVDLSLFPIDTLKTRLQAKGGF-----------VKNGGFHGVYRGL 129
>SPBC1271.11 |||tricarboxylate transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 258
Score = 30.7 bits (66), Expect = 0.28
Identities = 19/67 (28%), Positives = 29/67 (43%)
Frame = +2
Query: 338 THTAVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKF 517
T + PLD++K ++ + E Y+ VV +E G+ G KG S+
Sbjct: 181 TAAVLTPLDVIKTQINLRPESYRKVVRRI---YKENGIFGFEKGLGLRVFASSLGLSIYL 237
Query: 518 GFYEVFK 538
G YE K
Sbjct: 238 GTYEHVK 244
>SPBP23A10.06 |||manganese ion transporter |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 335
Score = 30.3 bits (65), Expect = 0.37
Identities = 32/123 (26%), Positives = 47/123 (38%), Gaps = 2/123 (1%)
Frame = +2
Query: 413 VNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYEVFKVAYAGMLDDETAYTYRTF 592
V+G R EGVR L +G P+ +F YE Y+ A
Sbjct: 86 VSGLYQIARHEGVRSLWRGLVPSLTMLLPANTVQFLGYEQLLPLYSDWGFPAAA------ 139
Query: 593 VYLAASASAEFIADIALSPMEAAKVRIQTMPGF--ASTLREAWPKMVKNXGYGTFYKGLV 766
A ASA I+ +SP+E + R+Q + G RE ++ KG++
Sbjct: 140 --AIAGASARTISATIVSPIELFRTRVQAVGGHYPPGHAREIANEVFDGLKLMIHQKGIL 197
Query: 767 PLW 775
LW
Sbjct: 198 NLW 200
>SPAC4G8.08 |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 271
Score = 29.1 bits (62), Expect = 0.86
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +2
Query: 356 PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGW 472
PL+++K R Q+ + +V+N R EG++G +G+
Sbjct: 103 PLEVIKARTQISQKG--SVINTISTLARSEGLKGFYRGY 139
>SPAC2F7.08c |snf5||chromatin remodeling complex subunit Snf5
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 632
Score = 28.7 bits (61), Expect = 1.1
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = +2
Query: 353 VPLDLVKCRLQVDAEKYK 406
+P+DLV RL++DA++YK
Sbjct: 137 LPVDLVPIRLEIDADRYK 154
>SPBC83.13 |||mitochondrial tricarboxylic acid
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 293
Score = 28.3 bits (60), Expect = 1.5
Identities = 36/156 (23%), Positives = 62/156 (39%), Gaps = 11/156 (7%)
Frame = +2
Query: 344 TAVVPLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSM---QGLCK 514
T + ++ + + ++ K F +E+G+RG+ +G + L
Sbjct: 124 TCMKTAEVTRAKQAATGQEVKGTFRVFADLYKEKGIRGINRGVNAVALRQMTNWGSRLAL 183
Query: 515 FGFYEVFKVAYAGMLDDETAYTYRTFVYLAASASAEFIADIALSPMEAAKVRIQTM---- 682
F E + G + E T + FV AS SA ++ P+E A+V +Q++
Sbjct: 184 SRFLEKPIRYFTGRTEAEPLTTGQRFV---ASVSAGALS-CWNQPLEVARVEMQSLTKGI 239
Query: 683 ----PGFASTLREAWPKMVKNXGYGTFYKGLVPLWG 778
PG T+ + KN G Y+G VP G
Sbjct: 240 QHSSPGIMQTIMSIY----KNNGIKGLYRGAVPRMG 271
>SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1275
Score = 28.3 bits (60), Expect = 1.5
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 3/36 (8%)
Frame = -1
Query: 507 RPCIEYPMKVGA---HPLARPRTPSSRTDTLKPFTT 409
RP E P+ G HPL RP PSS + P++T
Sbjct: 154 RPLPETPVSPGGSLVHPLPRPPLPSSVSSHSSPYST 189
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 28.3 bits (60), Expect = 1.5
Identities = 30/136 (22%), Positives = 54/136 (39%)
Frame = +2
Query: 356 PLDLVKCRLQVDAEKYKNVVNGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGFYEVF 535
PLD ++ + A K +++ K E G++G G + I C F FY
Sbjct: 124 PLDTMRTKFASYA-KTPHMLPATKKIYAEAGIKGFFPGLKFSVIQIGPYAGCFFMFYR-- 180
Query: 536 KVAYAGMLDDETAYTYRTFVYLAASASAEFIADIALSPMEAAKVRIQTMPGFASTLREAW 715
A +L T + A A ++ I + P++ +QT P + ++ +
Sbjct: 181 --ASEAVLSPLGLALSSTLSGVIAGAGSKAI----MFPVDTVVKTLQTFPSNYKSFKDCF 234
Query: 716 PKMVKNXGYGTFYKGL 763
+ +N G Y+GL
Sbjct: 235 LSIYRNSGIKGLYRGL 250
>SPCC1442.03 ||SPCC1450.19|ATP-Mg/Pi carrier
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 338
Score = 26.6 bits (56), Expect = 4.6
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +2
Query: 437 REEGVRGLAKGWAPTFIGYSMQGLCKFGFYE 529
+ EG+ GL +G+ P S Q F FYE
Sbjct: 293 KSEGLLGLFRGFGPRIFWTSSQSSLMFVFYE 323
>SPAC3G6.01 |hrp3||ATP-dependent DNA helicase Hrp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1388
Score = 26.6 bits (56), Expect = 4.6
Identities = 10/36 (27%), Positives = 17/36 (47%)
Frame = +2
Query: 416 NGFKVSVREEGVRGLAKGWAPTFIGYSMQGLCKFGF 523
+ F++ + V G + W P + G+CK GF
Sbjct: 1105 SNFQIPMHVRSVHGWSCQWGPREDSMLLSGICKHGF 1140
>SPBC428.08c |clr4||histone H3 methyltransferase
Clr4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 490
Score = 26.2 bits (55), Expect = 6.1
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = -1
Query: 444 SSRTDTLKPFTTFLYFSA--STWRRHFTRSRGTTAVWVRPHDRTPPTP 307
SSR+DT +P SA + W+R R +G+ + PH + P P
Sbjct: 35 SSRSDTWEPPENLSGCSAVLAEWKRRKRRLKGSNSDSDSPHHASNPHP 82
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 25.8 bits (54), Expect = 8.1
Identities = 13/53 (24%), Positives = 25/53 (47%), Gaps = 5/53 (9%)
Frame = +2
Query: 344 TAVVPLDLVKCRLQVD-----AEKYKNVVNGFKVSVREEGVRGLAKGWAPTFI 487
T P D+++ R QV+ YKN+ + + EG+ G +G++ +
Sbjct: 242 TLTFPADVLRRRFQVNRIPGIGHNYKNIKSAIFHIYKTEGINGFFRGYSSNML 294
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,185,389
Number of Sequences: 5004
Number of extensions: 58712
Number of successful extensions: 204
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 202
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 436477420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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