Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_J06
         (1033 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0219 - 19433053-19433110,19433243-19433547                       31   1.5  
11_06_0610 - 25449085-25453284                                         30   3.4  
04_02_0026 + 8708765-8710935,8711021-8711272,8711353-8711463,871...    29   6.0  
10_08_0214 - 15915156-15915713                                         29   7.9  

>01_05_0219 - 19433053-19433110,19433243-19433547
          Length = 120

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 15/38 (39%), Positives = 17/38 (44%)
 Frame = -1

Query: 541 PXAGALPXRGXXGGGPGXRGPXXXGSXXSXMGAGXGMG 428
           P  GALP     GGG G  GP   G     +G+  G G
Sbjct: 55  PGGGALPFASSGGGG-GDNGPAAGGGDGGILGSSSGAG 91


>11_06_0610 - 25449085-25453284
          Length = 1399

 Score = 29.9 bits (64), Expect = 3.4
 Identities = 28/111 (25%), Positives = 34/111 (30%), Gaps = 5/111 (4%)
 Frame = +2

Query: 659 SXVGXPPKPNHX----PGRVPNAEXXPXPPRGXXRXPWP-AXSGHXRGXXXXXXPTXXSX 823
           S    PP P       P   P AE  P  P      P P A  GH         P+  S 
Sbjct: 592 SKASPPPTPEEYTPSPPKSTPPAEKSPPTPESKASSPPPPAPEGHTPSPPESTPPSEKSP 651

Query: 824 XTTSRQAXXPCPAGSRXXXXXXGGXGXPXQARVEXXXAPPPXRXEXXAGPP 976
            T   +A  P P          G    P ++      +PP    E  + PP
Sbjct: 652 PTPESKASSPPP------PTPEGHTPSPPKSTPPTEKSPPTPESESSSPPP 696



 Score = 28.7 bits (61), Expect = 7.9
 Identities = 25/106 (23%), Positives = 33/106 (31%), Gaps = 5/106 (4%)
 Frame = +2

Query: 674 PPKPN-HXPG----RVPNAEXXPXPPRGXXRXPWPAXSGHXRGXXXXXXPTXXSXXTTSR 838
           PP P  H P       P+ +  P P       P P   GH         PT  S  T   
Sbjct: 630 PPAPEGHTPSPPESTPPSEKSPPTPESKASSPPPPTPEGHTPSPPKSTPPTEKSPPTPES 689

Query: 839 QAXXPCPAGSRXXXXXXGGXGXPXQARVEXXXAPPPXRXEXXAGPP 976
           ++  P P          G    P ++      +PP    E  + PP
Sbjct: 690 ESSSPPPPAPE------GHMPSPPKSTPPVEKSPPTPESEASSPPP 729


>04_02_0026 +
           8708765-8710935,8711021-8711272,8711353-8711463,
           8711553-8711634,8711909-8712100
          Length = 935

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 17/62 (27%), Positives = 22/62 (35%)
 Frame = +2

Query: 674 PPKPNHXPGRVPNAEXXPXPPRGXXRXPWPAXSGHXRGXXXXXXPTXXSXXTTSRQAXXP 853
           PP P   P   P  +  P P R   R P P  S   +       P   S  + ++Q   P
Sbjct: 483 PPSPPEPPS--PRHQPSPPPLRSPPRQPTPPPSPSQQPPLPAPQPVQASPTSPAKQHAPP 540

Query: 854 CP 859
            P
Sbjct: 541 AP 542


>10_08_0214 - 15915156-15915713
          Length = 185

 Score = 28.7 bits (61), Expect = 7.9
 Identities = 15/44 (34%), Positives = 16/44 (36%)
 Frame = -1

Query: 535 AGALPXRGXXGGGPGXRGPXXXGSXXSXMGAGXGMGXXXALAHH 404
           AG     G   GG G  G    G   S  G+G G G      HH
Sbjct: 142 AGGAHGGGYGSGGGGGGGGGQGGGSGSGSGSGYGSGSGGGNGHH 185


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,323,096
Number of Sequences: 37544
Number of extensions: 243454
Number of successful extensions: 1159
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 669
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1108
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3036070960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)