Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_J05
         (916 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF560717-1|ABQ59027.1|  983|Homo sapiens PHC3 protein protein.         32   3.3  
BC131772-1|AAI31773.1|  983|Homo sapiens PHC3 protein protein.         32   3.3  
AL137533-1|CAB70796.1|  198|Homo sapiens hypothetical protein pr...    32   3.3  
AJ320486-1|CAC86587.2|  983|Homo sapiens homolog of polyhomeotic...    32   3.3  
AF444193-1|AAM51781.1|  983|Homo sapiens polyhomeotic 3 protein ...    32   3.3  
AF263918-1|AAF73293.1|  910|Homo sapiens inner nuclear membrane ...    32   3.3  
AF112299-1|AAD31593.2|  911|Homo sapiens integral inner nuclear ...    32   3.3  
AF326592-1|AAL37371.1| 1171|Homo sapiens homeodomain interacting...    31   7.7  
AF208291-1|AAG41236.1| 1198|Homo sapiens protein kinase HIPK2 pr...    31   7.7  
AF207702-1|AAG35710.1|  911|Homo sapiens homeodomain-interacting...    31   7.7  
AC005531-1|AAS00368.1|  292|Homo sapiens unknown protein.              31   7.7  

>EF560717-1|ABQ59027.1|  983|Homo sapiens PHC3 protein protein.
          Length = 983

 Score = 31.9 bits (69), Expect = 3.3
 Identities = 21/79 (26%), Positives = 40/79 (50%)
 Frame = -2

Query: 504 SGRPETSPSCPTALRSPEAFTIVSSSKASLNSRL*MKNRTSFSYLAGWKNHCSLVLSALL 325
           SGRP TSP+     +S  + T ++ S +   ++L  +++ S S  +G     +++L +  
Sbjct: 105 SGRPSTSPTGSVTQQSSMSQTSINLSTSPTPAQLISRSQAS-SSTSGSITQQTMLLGSTS 163

Query: 324 PPYTTRSRALQLQVDVLIF 268
           P  T     + L+  +LIF
Sbjct: 164 PTLTASQAQMYLRAQMLIF 182


>BC131772-1|AAI31773.1|  983|Homo sapiens PHC3 protein protein.
          Length = 983

 Score = 31.9 bits (69), Expect = 3.3
 Identities = 21/79 (26%), Positives = 40/79 (50%)
 Frame = -2

Query: 504 SGRPETSPSCPTALRSPEAFTIVSSSKASLNSRL*MKNRTSFSYLAGWKNHCSLVLSALL 325
           SGRP TSP+     +S  + T ++ S +   ++L  +++ S S  +G     +++L +  
Sbjct: 105 SGRPSTSPTGSVTQQSSMSQTSINLSTSPTPAQLISRSQAS-SSTSGSITQQTMLLGSTS 163

Query: 324 PPYTTRSRALQLQVDVLIF 268
           P  T     + L+  +LIF
Sbjct: 164 PTLTASQAQMYLRAQMLIF 182


>AL137533-1|CAB70796.1|  198|Homo sapiens hypothetical protein
           protein.
          Length = 198

 Score = 31.9 bits (69), Expect = 3.3
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -3

Query: 782 SPNFTNKAFFSLHXSWGLSKLINVSY 705
           SP +  KAF +LH SW   KL+ V Y
Sbjct: 127 SPEYAGKAFKALHGSWFDGKLVTVKY 152


>AJ320486-1|CAC86587.2|  983|Homo sapiens homolog of polyhomeotic 3
           protein.
          Length = 983

 Score = 31.9 bits (69), Expect = 3.3
 Identities = 21/79 (26%), Positives = 40/79 (50%)
 Frame = -2

Query: 504 SGRPETSPSCPTALRSPEAFTIVSSSKASLNSRL*MKNRTSFSYLAGWKNHCSLVLSALL 325
           SGRP TSP+     +S  + T ++ S +   ++L  +++ S S  +G     +++L +  
Sbjct: 105 SGRPSTSPTGSVTQQSSMSQTSINLSTSPTPAQLISRSQAS-SSTSGSITQQTMLLGSTS 163

Query: 324 PPYTTRSRALQLQVDVLIF 268
           P  T     + L+  +LIF
Sbjct: 164 PTLTASQAQMYLRAQMLIF 182


>AF444193-1|AAM51781.1|  983|Homo sapiens polyhomeotic 3 protein
           protein.
          Length = 983

 Score = 31.9 bits (69), Expect = 3.3
 Identities = 21/79 (26%), Positives = 40/79 (50%)
 Frame = -2

Query: 504 SGRPETSPSCPTALRSPEAFTIVSSSKASLNSRL*MKNRTSFSYLAGWKNHCSLVLSALL 325
           SGRP TSP+     +S  + T ++ S +   ++L  +++ S S  +G     +++L +  
Sbjct: 105 SGRPSTSPTGSVTQQSSMSQTSINLSTSPTPAQLISRSQAS-SSTSGSITQQTMLLGSTS 163

Query: 324 PPYTTRSRALQLQVDVLIF 268
           P  T     + L+  +LIF
Sbjct: 164 PTLTASQAQMYLRAQMLIF 182


>AF263918-1|AAF73293.1|  910|Homo sapiens inner nuclear membrane
           protein protein.
          Length = 910

 Score = 31.9 bits (69), Expect = 3.3
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -3

Query: 782 SPNFTNKAFFSLHXSWGLSKLINVSY 705
           SP +  KAF +LH SW   KL+ V Y
Sbjct: 839 SPEYAGKAFKALHGSWFDGKLVTVKY 864


>AF112299-1|AAD31593.2|  911|Homo sapiens integral inner nuclear
           membrane protein MAN1 protein.
          Length = 911

 Score = 31.9 bits (69), Expect = 3.3
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = -3

Query: 782 SPNFTNKAFFSLHXSWGLSKLINVSY 705
           SP +  KAF +LH SW   KL+ V Y
Sbjct: 840 SPEYAGKAFKALHGSWFDGKLVTVKY 865


>AF326592-1|AAL37371.1| 1171|Homo sapiens homeodomain interacting
            protein kinase 2 protein.
          Length = 1171

 Score = 30.7 bits (66), Expect = 7.7
 Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
 Frame = -2

Query: 480  SCPTALRSPEAFTIVSSSKASLNSRL*MKNRTSFSYLAGWKNHCS-LVLSALLPPYTTRS 304
            SC T   SP + +  ++S  S+  R    N  +F      +NHC+    + ++PP  T++
Sbjct: 890  SCVTVHDSPYSDSSSNTSPYSVQQRAGHNNANAFDTKGSLENHCTGNPRTIIVPPLKTQA 949

Query: 303  RALQLQVDVLI 271
              + ++ D L+
Sbjct: 950  SEVLVECDSLV 960


>AF208291-1|AAG41236.1| 1198|Homo sapiens protein kinase HIPK2
            protein.
          Length = 1198

 Score = 30.7 bits (66), Expect = 7.7
 Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
 Frame = -2

Query: 480  SCPTALRSPEAFTIVSSSKASLNSRL*MKNRTSFSYLAGWKNHCS-LVLSALLPPYTTRS 304
            SC T   SP + +  ++S  S+  R    N  +F      +NHC+    + ++PP  T++
Sbjct: 917  SCVTVHDSPYSDSSSNTSPYSVQQRAGHNNANAFDTKGSLENHCTGNPRTIIVPPLKTQA 976

Query: 303  RALQLQVDVLI 271
              + ++ D L+
Sbjct: 977  SEVLVECDSLV 987


>AF207702-1|AAG35710.1|  911|Homo sapiens homeodomain-interacting
            protein kinase 2 protein.
          Length = 911

 Score = 30.7 bits (66), Expect = 7.7
 Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
 Frame = -2

Query: 480  SCPTALRSPEAFTIVSSSKASLNSRL*MKNRTSFSYLAGWKNHCS-LVLSALLPPYTTRS 304
            SC T   SP + +  ++S  S+  R    N  +F      +NHC+    + ++PP  T++
Sbjct: 810  SCVTVHDSPYSDSSSNTSPYSVQQRAGHNNANAFDTKGSLENHCTGNPRTIIVPPLKTQA 869

Query: 303  RALQLQVDVLI 271
              + ++ D L+
Sbjct: 870  SEVLVECDSLV 880


>AC005531-1|AAS00368.1|  292|Homo sapiens unknown protein.
          Length = 292

 Score = 30.7 bits (66), Expect = 7.7
 Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
 Frame = -2

Query: 480 SCPTALRSPEAFTIVSSSKASLNSRL*MKNRTSFSYLAGWKNHCS-LVLSALLPPYTTRS 304
           SC T   SP + +  ++S  S+  R    N  +F      +NHC+    + ++PP  T++
Sbjct: 11  SCVTVHDSPYSDSSSNTSPYSVQQRAGHNNANAFDTKGSLENHCTGNPRTIIVPPLKTQA 70

Query: 303 RALQLQVDVLI 271
             + ++ D L+
Sbjct: 71  SEVLVECDSLV 81


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,823,858
Number of Sequences: 237096
Number of extensions: 1810478
Number of successful extensions: 4038
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3892
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4038
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11881370308
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)