Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP27_F_J04
(896 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.64
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.64
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.64
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 31 1.1
AC084158-11|AAK68558.1| 555|Caenorhabditis elegans Hypothetical... 31 1.5
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 30 2.0
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 29 4.5
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical pr... 29 6.0
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 6.0
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.9 bits (69), Expect = 0.64
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = +3
Query: 438 PXXGXKKKXXXXPPPXXXXPGXKKKXXPPXKTPPXFXKKXXPPPPP 575
P G PPP PG PP PP K PPPPP
Sbjct: 746 PPPGGLPPISGGPPPPPPPPGGCPPPPPPP--PPGGFKGGPPPPPP 789
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.9 bits (69), Expect = 0.64
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = +3
Query: 438 PXXGXKKKXXXXPPPXXXXPGXKKKXXPPXKTPPXFXKKXXPPPPP 575
P G PPP PG PP PP K PPPPP
Sbjct: 746 PPPGGLPPISGGPPPPPPPPGGCPPPPPPP--PPGGFKGGPPPPPP 789
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.9 bits (69), Expect = 0.64
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = +3
Query: 438 PXXGXKKKXXXXPPPXXXXPGXKKKXXPPXKTPPXFXKKXXPPPPP 575
P G PPP PG PP PP K PPPPP
Sbjct: 329 PPPGGLPPISGGPPPPPPPPGGCPPPPPPP--PPGGFKGGPPPPPP 372
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +3
Query: 474 PPPXXXXPGXKKKXXPPXKTPPXFXKKXXPPPPP 575
PPP P PP PP PPPPP
Sbjct: 562 PPPPPPLPQNLSGAPPPPPPPPPMLGGPPPPPPP 595
Score = 29.5 bits (63), Expect = 3.4
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +3
Query: 474 PPPXXXXPGXKKKXXPPXKTPPXFXKKXXPPPPP 575
PPP PP PP PPPPP
Sbjct: 563 PPPPPLPQNLSGAPPPPPPPPPMLGGPPPPPPPP 596
>AC084158-11|AAK68558.1| 555|Caenorhabditis elegans Hypothetical
protein Y69A2AR.14 protein.
Length = 555
Score = 30.7 bits (66), Expect = 1.5
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +3
Query: 519 PPXKTPPXFXKKXXPPPPPLXXXXPXXKXXGK 614
PP +TP K PPPPP+ P K
Sbjct: 297 PPRRTPQPHPKPPPPPPPPIHEAQPEVSDSNK 328
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/52 (30%), Positives = 18/52 (34%)
Frame = +3
Query: 438 PXXGXKKKXXXXPPPXXXXPGXKKKXXPPXKTPPXFXKKXXPPPPPLXXXXP 593
P K PPP ++ PP PP K PPPP L P
Sbjct: 58 PNDNIVKATPPPPPPPPPLISILQQAPPPPPPPPPPTLKAPPPPPILGLKTP 109
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 29.1 bits (62), Expect = 4.5
Identities = 18/48 (37%), Positives = 19/48 (39%)
Frame = -2
Query: 601 FXXGXXXKRGGGGGXXFFXKXGGVFXGGXXFFFXPGXXXXGGGXXXXF 458
F G GGGGG F GG F GG + G GGG F
Sbjct: 50 FFGGGGGGGGGGGGGGFGGGNGG-FGGGGGGNYGGGGGNQGGGGGGGF 96
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 28.7 bits (61), Expect = 6.0
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +3
Query: 474 PPPXXXXPGXKKKXXPPXKTPPXFXKKXXPPPPP 575
P P K PP PP PPPPP
Sbjct: 476 PSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPP 509
>Z69658-1|CAA93481.1| 418|Caenorhabditis elegans Hypothetical
protein C36H8.1 protein.
Length = 418
Score = 28.7 bits (61), Expect = 6.0
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +3
Query: 519 PPXKTPPXFXKKXXPPPPPLXXXXPXXK 602
PP + PP ++ PPPPP P K
Sbjct: 182 PPPQEPPKPVEQAAPPPPPAPMPVPVEK 209
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 28.7 bits (61), Expect = 6.0
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +3
Query: 474 PPPXXXXPGXKKKXXPPXKTPPXFXKKXXPPPPP 575
P P K PP PP PPPPP
Sbjct: 483 PSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPP 516
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,078,227
Number of Sequences: 27780
Number of extensions: 134924
Number of successful extensions: 2231
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 471
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1197
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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