Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_J03
         (882 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    24   2.1  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    22   6.5  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     22   8.6  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 23.8 bits (49), Expect = 2.1
 Identities = 11/26 (42%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
 Frame = -2

Query: 323 ARSNVHG-RLTVERVQRLDTCNNFII 249
           ARS + G R+T E+++R D  +N+I+
Sbjct: 707 ARSLMEGPRMTAEQLKRTDIIHNYIM 732


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 10/51 (19%), Positives = 21/51 (41%)
 Frame = +2

Query: 602 IALFVTIISCNKQVNNNNCIHFMFQVQGXVWEGFSALMNRPTXGEKAVWVL 754
           +  + +I+    QVN   C ++     G ++  ++     P  G K  W +
Sbjct: 24  LIFYGSIMFSMTQVNKEECDYYQNLNLGEIYYIYNPRYPLPYSGSKCTWTI 74


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
 Frame = -2

Query: 212 ERYRVVLDQLVMYQGTGYIADKKMIG-LNTDAQGQTEEHERFHCDRRRALSEEIRVTKI 39
           ER + V  QL  Y+G G     + +G LN       +E E      +++LS     +K+
Sbjct: 499 ERMKQVYQQLNKYRGNGVSLKGETVGLLNALPPSSMKETEEEKKKTKQSLSPSENQSKM 557


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 221,217
Number of Sequences: 438
Number of extensions: 4708
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28644972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)