Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_J02
         (877 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624...    31   0.92 
12_01_1025 - 10506144-10506226,10506643-10506699,10507502-105076...    30   2.8  
11_01_0419 + 3226224-3226756,3228010-3228169,3228256-3228435,322...    29   3.7  
06_02_0019 - 10656005-10657511,10657712-10658739                       29   3.7  
06_02_0024 - 10714741-10716241,10716774-10717840                       28   8.5  

>03_02_0186 -
           6243487-6243799,6243892-6244400,6244495-6244557,
           6245482-6245681,6246125-6246519,6246776-6246888
          Length = 530

 Score = 31.5 bits (68), Expect = 0.92
 Identities = 15/25 (60%), Positives = 15/25 (60%)
 Frame = +1

Query: 457 CLFCACASQSRSILVCLLHRCYPAP 531
           CLFC     SR ILVC L RC  AP
Sbjct: 58  CLFCEANFISRRILVCDLLRCLVAP 82


>12_01_1025 -
           10506144-10506226,10506643-10506699,10507502-10507605,
           10507884-10507937,10508107-10508193,10509027-10509214,
           10509793-10509854,10510084-10510354,10510756-10510834,
           10511715-10511913,10512816-10512960,10513324-10513416,
           10514449-10514736
          Length = 569

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
 Frame = +2

Query: 440 ETFYKSACFARVHLNQGQFLYAF-YIAVIQRPDCHGF 547
           ETF+ +AC  R HL QG+ + A+ Y+   +  DC GF
Sbjct: 427 ETFFTTACMGRGHLCQGKLVDAYRYLHKEKDMDC-GF 462


>11_01_0419 +
           3226224-3226756,3228010-3228169,3228256-3228435,
           3228525-3228659,3229262-3229344,3229442-3229535,
           3229649-3229735
          Length = 423

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 17/41 (41%), Positives = 23/41 (56%)
 Frame = -1

Query: 592 IHKHFRVYFIRSRNNETVAIRALDNSDVEGIQELTLIEMHT 470
           IHK FR++  R  + E +AIRA  NS +     L L +M T
Sbjct: 319 IHKPFRIHLGRGLHGECLAIRADGNSKLSHEIGLELSKMST 359


>06_02_0019 - 10656005-10657511,10657712-10658739
          Length = 844

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 17/65 (26%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
 Frame = -2

Query: 702 FVNEVVVFLVNAIXXCGFRINEAMLHLCYVNFCSTSIFINILGY-TSYGAGTTKPWQSGR 526
           F+  VVV ++         +NE +L        +T+I ++++G   +YGAG+++ W++  
Sbjct: 722 FMASVVVIVLLLPESASPHVNEWLLKAM-----NTTIVLDMIGLLVAYGAGSSREWETSG 776

Query: 525 WITAM 511
           ++ AM
Sbjct: 777 YVIAM 781


>06_02_0024 - 10714741-10716241,10716774-10717840
          Length = 855

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 14/67 (20%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
 Frame = -2

Query: 708 IGFVNEVVVFLVNAIXXCGFRINEAMLHLCYVNFCSTSIFINILGY-TSYGAGTTKPWQS 532
           I F+  ++V ++         +NE +L        +T++ ++++G   +YG G+++ W +
Sbjct: 737 ISFMASIIVIILLLPESLKLNVNEWLLKAM-----NTTVVLDMIGLLVAYGTGSSRDWDT 791

Query: 531 GRWITAM 511
             ++ AM
Sbjct: 792 SGYVIAM 798


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,573,043
Number of Sequences: 37544
Number of extensions: 346664
Number of successful extensions: 720
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 703
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 720
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)