Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP27_F_J02
(877 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 83 2e-18
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 83 2e-18
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 78 9e-17
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 78 9e-17
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 77 2e-16
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 77 2e-16
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 72 8e-15
AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase prot... 49 6e-08
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 25 1.2
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 24 1.6
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 23 2.8
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 23 2.8
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 23 3.7
L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein pro... 23 4.9
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 22 6.5
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 22 6.5
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 22 6.5
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 22 6.5
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 22 8.5
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 22 8.5
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 22 8.5
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 22 8.5
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 22 8.5
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 83.4 bits (197), Expect = 2e-18
Identities = 37/79 (46%), Positives = 54/79 (68%)
Frame = +2
Query: 374 FYDKMRDEAIALFHLFYYAKDFETFYKSACFARVHLNQGQFLYAFYIAVIQRPDCHGFVV 553
+Y ++ E ALF LFY+AKDF+ F+K+A +A+ ++N+ Q++Y+ Y AVI RPD +
Sbjct: 100 YYPQLLREMSALFKLFYHAKDFDIFFKTALWAKNNINEAQYIYSLYTAVITRPDTKFIQL 159
Query: 554 PAPYEVYPKMFMNMEVLQK 610
P YE+ P F N EVLQK
Sbjct: 160 PPLYEMCPYFFFNSEVLQK 178
Score = 56.8 bits (131), Expect = 2e-10
Identities = 28/75 (37%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Frame = +1
Query: 154 SKNVDAVFVEKQKKILSFFQDVSQ-LNTDDEYYKIGKDYDIEMNMDNYTNKKAVEEFLKM 330
+K D F+ KQKK+ + V+Q + +Y G+ ++IE N+D+YTN AV+EFL +
Sbjct: 26 TKTADKDFLLKQKKVYNLLYRVAQPALANITWYNEGQAWNIEANIDSYTNAAAVKEFLSI 85
Query: 331 YRTGFMPKNLEFSXF 375
Y+ G +P+ FS +
Sbjct: 86 YKHGMLPRGELFSLY 100
Score = 37.1 bits (82), Expect = 2e-04
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Frame = +1
Query: 691 FVYKANYSNRRL---YNNEXQRLTYFTXDXGXNAYYYYFHSHLPXWWTS 828
++ ANYS L YN E +L YF D G N YY++ P W S
Sbjct: 199 YIIPANYSGWYLNHDYNLE-NKLNYFIEDIGLNTYYFFLRQAFPFWLPS 246
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 83.4 bits (197), Expect = 2e-18
Identities = 37/79 (46%), Positives = 54/79 (68%)
Frame = +2
Query: 374 FYDKMRDEAIALFHLFYYAKDFETFYKSACFARVHLNQGQFLYAFYIAVIQRPDCHGFVV 553
+Y ++ E ALF LFY+AKDF+ F+K+A +A+ ++N+ Q++Y+ Y AVI RPD +
Sbjct: 100 YYPQLLREMSALFKLFYHAKDFDIFFKTALWAKNNINEAQYIYSLYTAVITRPDTKFIQL 159
Query: 554 PAPYEVYPKMFMNMEVLQK 610
P YE+ P F N EVLQK
Sbjct: 160 PPLYEMCPYFFFNSEVLQK 178
Score = 56.8 bits (131), Expect = 2e-10
Identities = 28/75 (37%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Frame = +1
Query: 154 SKNVDAVFVEKQKKILSFFQDVSQ-LNTDDEYYKIGKDYDIEMNMDNYTNKKAVEEFLKM 330
+K D F+ KQKK+ + V+Q + +Y G+ ++IE N+D+YTN AV+EFL +
Sbjct: 26 TKTADKDFLLKQKKVYNLLYRVAQPALANITWYNEGQAWNIEANIDSYTNAAAVKEFLSI 85
Query: 331 YRTGFMPKNLEFSXF 375
Y+ G +P+ FS +
Sbjct: 86 YKHGMLPRGELFSLY 100
Score = 36.7 bits (81), Expect = 3e-04
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Frame = +1
Query: 691 FVYKANYSNRRL---YNNEXQRLTYFTXDXGXNAYYYYFHSHLPXWWTS 828
++ ANYS L YN E +L YF D G N YY++ P W S
Sbjct: 199 YIIPANYSGWYLNHDYNLE-NKLIYFIEDIGLNTYYFFLRQAFPFWLPS 246
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 78.2 bits (184), Expect = 9e-17
Identities = 35/76 (46%), Positives = 50/76 (65%)
Frame = +2
Query: 383 KMRDEAIALFHLFYYAKDFETFYKSACFARVHLNQGQFLYAFYIAVIQRPDCHGFVVPAP 562
+MR +A+ LF L Y AK F+ FY +A +AR ++N+ +LYA +AVI RPD +P
Sbjct: 101 EMRHQAVVLFRLLYSAKTFDVFYNTAVWARFNVNEQMYLYALSVAVIHRPDTKLMKLPPM 160
Query: 563 YEVYPKMFMNMEVLQK 610
YEV P ++ N EV+QK
Sbjct: 161 YEVMPHLYFNDEVMQK 176
Score = 50.8 bits (116), Expect = 2e-08
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Frame = +1
Query: 148 IKSKNVDAVFVEKQKKILSFFQDVSQLNT-DDEYYKIGKDYDIEMNMDNYTNKKAVEEFL 324
+ +K D +V +QK I F V Q E Y+ + +++ N+DNY +K+AV EF+
Sbjct: 22 VPNKVADKTYVTRQKNIYELFWHVDQPTVYHPELYQKARTFNLVENLDNYNDKEAVNEFM 81
Query: 325 KMYRTGFMPKNLEFS 369
++ + G +P+ F+
Sbjct: 82 QLLKHGMLPRGQVFT 96
Score = 39.5 bits (88), Expect = 4e-05
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +1
Query: 685 DYFVYKANYSNRRL--YNNEXQRLTYFTXDXGXNAYYYYFHSHLPXWWTS 828
DY++ ANY+ L +N QRL YFT D G N +Y+ + + P + S
Sbjct: 196 DYYLLAANYTGWYLTKHNVPEQRLNYFTEDVGLNHFYFMLNHNYPPFMLS 245
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 78.2 bits (184), Expect = 9e-17
Identities = 35/76 (46%), Positives = 50/76 (65%)
Frame = +2
Query: 383 KMRDEAIALFHLFYYAKDFETFYKSACFARVHLNQGQFLYAFYIAVIQRPDCHGFVVPAP 562
+MR +A+ LF L Y AK F+ FY +A +AR ++N+ +LYA +AVI RPD +P
Sbjct: 101 EMRHQAVVLFRLLYSAKTFDVFYNTAVWARFNVNEQMYLYALSVAVIHRPDTKLMKLPPM 160
Query: 563 YEVYPKMFMNMEVLQK 610
YEV P ++ N EV+QK
Sbjct: 161 YEVMPHLYFNDEVMQK 176
Score = 50.8 bits (116), Expect = 2e-08
Identities = 23/75 (30%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Frame = +1
Query: 148 IKSKNVDAVFVEKQKKILSFFQDVSQLNT-DDEYYKIGKDYDIEMNMDNYTNKKAVEEFL 324
+ +K D +V +QK I F V Q E Y+ + +++ N+DNY +K+AV EF+
Sbjct: 22 VPNKVADKTYVTRQKNIYELFWHVDQPTVYHPELYQKARTFNLVENLDNYNDKEAVNEFM 81
Query: 325 KMYRTGFMPKNLEFS 369
++ + G +P+ F+
Sbjct: 82 QLLKHGMLPRGQVFT 96
Score = 39.5 bits (88), Expect = 4e-05
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +1
Query: 685 DYFVYKANYSNRRL--YNNEXQRLTYFTXDXGXNAYYYYFHSHLPXWWTS 828
DY++ ANY+ L +N QRL YFT D G N +Y+ + + P + S
Sbjct: 196 DYYLLAANYTGWYLTKHNVPEQRLNYFTEDVGLNHFYFMLNHNYPPFMLS 245
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 77.0 bits (181), Expect = 2e-16
Identities = 35/72 (48%), Positives = 46/72 (63%)
Frame = +2
Query: 395 EAIALFHLFYYAKDFETFYKSACFARVHLNQGQFLYAFYIAVIQRPDCHGFVVPAPYEVY 574
E LF L Y AKDF+TFYK+A +AR+ +N G F AF IAV+ RPD PA YE+Y
Sbjct: 107 EVRMLFELLYNAKDFQTFYKTAAWARLRMNSGMFTTAFSIAVLYRPDTKYMKFPAIYEIY 166
Query: 575 PKMFMNMEVLQK 610
P F + V+++
Sbjct: 167 PNYFFDSSVIEE 178
Score = 58.0 bits (134), Expect = 1e-10
Identities = 29/70 (41%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Frame = +1
Query: 166 DAVFVEKQKKILSFFQDVSQLNTDD-EYYKIGKDYDIEMNMDNYTNKKAVEEFLKMYRTG 342
D F+ KQKKI V Q + D E+Y +G++YD+E NMD Y +K V++FL Y+ G
Sbjct: 29 DMDFLHKQKKIFDLLLYVRQADLSDAEWYDVGRNYDMESNMDMYKDKNVVQKFLWWYKQG 88
Query: 343 -FMPKNLEFS 369
F+ +N F+
Sbjct: 89 MFLSRNAIFT 98
Score = 46.0 bits (104), Expect = 5e-07
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +1
Query: 691 FVYKANYSNR--RLYNNEXQRLTYFTXDXGXNAYYYYFHSHLPXWWTS 828
++ NYS++ R YN+ +L YF D NAYYYY LP W +S
Sbjct: 200 YIVNTNYSSKYMREYNDPEYKLDYFMEDVELNAYYYYMREMLPYWMSS 247
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 77.0 bits (181), Expect = 2e-16
Identities = 35/72 (48%), Positives = 46/72 (63%)
Frame = +2
Query: 395 EAIALFHLFYYAKDFETFYKSACFARVHLNQGQFLYAFYIAVIQRPDCHGFVVPAPYEVY 574
E LF L Y AKDF+TFYK+A +AR+ +N G F AF IAV+ RPD PA YE+Y
Sbjct: 107 EVRMLFELLYNAKDFQTFYKTAAWARLRMNSGMFTTAFSIAVLYRPDTKYMKFPAIYEIY 166
Query: 575 PKMFMNMEVLQK 610
P F + V+++
Sbjct: 167 PNYFFDSSVIEE 178
Score = 58.0 bits (134), Expect = 1e-10
Identities = 29/70 (41%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Frame = +1
Query: 166 DAVFVEKQKKILSFFQDVSQLNTDD-EYYKIGKDYDIEMNMDNYTNKKAVEEFLKMYRTG 342
D F+ KQKKI V Q + D E+Y +G++YD+E NMD Y +K V++FL Y+ G
Sbjct: 29 DMDFLHKQKKIFDLLLYVRQADLSDAEWYDVGRNYDMESNMDMYKDKNVVQKFLWWYKQG 88
Query: 343 -FMPKNLEFS 369
F+ +N F+
Sbjct: 89 MFLSRNAIFT 98
Score = 46.8 bits (106), Expect = 3e-07
Identities = 21/48 (43%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = +1
Query: 691 FVYKANYS--NRRLYNNEXQRLTYFTXDXGXNAYYYYFHSHLPXWWTS 828
++ NYS N R YN+ +L YF D NAYYYY LP W +S
Sbjct: 200 YIVNTNYSSKNMREYNDPEYKLDYFMEDVELNAYYYYMREMLPYWMSS 247
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 71.7 bits (168), Expect = 8e-15
Identities = 31/76 (40%), Positives = 49/76 (64%)
Frame = +2
Query: 383 KMRDEAIALFHLFYYAKDFETFYKSACFARVHLNQGQFLYAFYIAVIQRPDCHGFVVPAP 562
++R E L+ + AKD++TF K+A +ARVH+N+GQFL AF AV+ R D + P
Sbjct: 99 QLRKEVSLLYRILLGAKDYQTFLKTAAWARVHVNEGQFLKAFVAAVLTRQDTQSVIFPPV 158
Query: 563 YEVYPKMFMNMEVLQK 610
YE+ P+ ++ V+Q+
Sbjct: 159 YEILPQHHLDSRVIQE 174
Score = 40.3 bits (90), Expect = 2e-05
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Frame = +1
Query: 148 IKSKNVDAVFVEKQKKILSFFQDVSQLNTDDEYYKIGKDYDIEMNMDNYTNKKAVEEFLK 327
+K + D + KQ+ ++ Q +SQ + E +G YDIE N Y N V +
Sbjct: 20 VKQRAADQDLLNKQQDVIQLLQKISQPIPNQELQNLGASYDIESNSHQYKNPIIVMYYAG 79
Query: 328 MYRTGFM-PKNLEFS 369
+ G + P+ FS
Sbjct: 80 AVKAGLVQPQGTTFS 94
Score = 29.5 bits (63), Expect = 0.043
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +1
Query: 706 NYSNRRLYNNEXQRLTYFTXDXGXNAYY 789
NYS L +++ Q+L+YFT D G AYY
Sbjct: 197 NYS--ALLSHDEQQLSYFTQDIGLAAYY 222
>AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase
protein.
Length = 693
Score = 48.8 bits (111), Expect = 6e-08
Identities = 24/79 (30%), Positives = 37/79 (46%)
Frame = +2
Query: 374 FYDKMRDEAIALFHLFYYAKDFETFYKSACFARVHLNQGQFLYAFYIAVIQRPDCHGFVV 553
F R A L +F + +E F A + R LN F+YA +A++ RPD V
Sbjct: 85 FIPAHRKIAARLIDIFMGMRTYEDFLSVAVYCRDRLNPNLFIYALSVAILHRPDTKDLPV 144
Query: 554 PAPYEVYPKMFMNMEVLQK 610
P EV+P +M+ + +
Sbjct: 145 PPLTEVFPDKYMDSGIFSR 163
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 24.6 bits (51), Expect = 1.2
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +3
Query: 66 AGNHEVCLDSGWACSRRAQQCSTKTEH 146
AGN+E DSG A S R ++ EH
Sbjct: 256 AGNNEDSSDSGAAASDRPPASASSNEH 282
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 24.2 bits (50), Expect = 1.6
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1
Query: 670 IHKENDYFVYKANYSNRRLYNN 735
IH N+Y K NY+N+ YNN
Sbjct: 90 IHNNNNY---KYNYNNKYNYNN 108
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.4 bits (48), Expect = 2.8
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +1
Query: 670 IHKENDYFVYKANYSNRRLYNNEXQRLTYF 759
IH N YK NY+N NN + Y+
Sbjct: 89 IHNNN----YKYNYNNNNYNNNNYNKKLYY 114
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.4 bits (48), Expect = 2.8
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = +1
Query: 670 IHKENDYFVYKANYSNRRLYNNEXQRLTYF 759
IH N YK NY+N NN + Y+
Sbjct: 89 IHNNN----YKYNYNNNNYNNNNYNKKLYY 114
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 23.0 bits (47), Expect = 3.7
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1
Query: 673 HKENDYFVYKANYSNRRLYNN 735
+K ++Y Y NY+N YNN
Sbjct: 322 YKYSNYNNYNNNYNNYNNYNN 342
>L01587-1|AAA27734.1| 69|Apis mellifera zinc finger protein
protein.
Length = 69
Score = 22.6 bits (46), Expect = 4.9
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +1
Query: 580 NVYEYGSAAKIYVTKMQHGL 639
NVY+Y A Y TK H L
Sbjct: 41 NVYQYRCANCTYATKYCHSL 60
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 6.5
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +1
Query: 670 IHKENDYFVYKANYSNRRLYNN 735
IH N + Y N N++LY N
Sbjct: 90 IHNNNYKYNYNNNNYNKKLYYN 111
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 6.5
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +1
Query: 670 IHKENDYFVYKANYSNRRLYNN 735
IH N + Y N N++LY N
Sbjct: 90 IHNNNYKYNYNNNNYNKKLYYN 111
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 6.5
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +1
Query: 670 IHKENDYFVYKANYSNRRLYNN 735
IH N + Y N N++LY N
Sbjct: 90 IHNNNYKYNYNNNNYNKKLYYN 111
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 6.5
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +1
Query: 670 IHKENDYFVYKANYSNRRLYNN 735
IH N + Y N N++LY N
Sbjct: 90 IHNNNYKYNYNNNNYNKKLYYN 111
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 8.5
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +1
Query: 706 NYSNRRLYNNEXQRLTYF 759
NY+N NN ++L Y+
Sbjct: 96 NYNNNNYNNNNYKKLQYY 113
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 8.5
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +1
Query: 706 NYSNRRLYNNEXQRLTYF 759
NY+N NN ++L Y+
Sbjct: 96 NYNNNNYNNNNYKKLQYY 113
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 8.5
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +1
Query: 706 NYSNRRLYNNEXQRLTYF 759
NY+N NN ++L Y+
Sbjct: 96 NYNNNNYNNNNYKKLQYY 113
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 8.5
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = +1
Query: 706 NYSNRRLYNNEXQRLTYF 759
NY+N NN ++L Y+
Sbjct: 96 NYNNNNYNNNNYKKLQYY 113
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 21.8 bits (44), Expect = 8.5
Identities = 8/33 (24%), Positives = 16/33 (48%)
Frame = +1
Query: 703 ANYSNRRLYNNEXQRLTYFTXDXGXNAYYYYFH 801
++ SNR ++NN + Y + N Y++
Sbjct: 83 SSLSNRTIHNNNNYKYNYNNNNYNNNCKKLYYN 115
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,419
Number of Sequences: 438
Number of extensions: 4327
Number of successful extensions: 47
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 47
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28402218
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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