Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_I15
         (885 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1136 + 24218601-24218734,24218769-24219906                       30   2.8  
12_01_0752 - 6798938-6799312,6799628-6799768,6800257-6800325,680...    28   8.7  

>07_03_1136 + 24218601-24218734,24218769-24219906
          Length = 423

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 16/43 (37%), Positives = 18/43 (41%)
 Frame = -1

Query: 411 GGGAPPXXXPPXXKXXXGGEXKKXXXXGGGGXXXXXXXILGGG 283
           GGG PP   P       GG   +    GGGG       +LGGG
Sbjct: 113 GGGGPPSLPP----GAGGGGGARPPAPGGGGGGGAPRRVLGGG 151


>12_01_0752 -
           6798938-6799312,6799628-6799768,6800257-6800325,
           6800407-6800454,6801740-6801836,6801922-6802001,
           6802099-6802170,6802335-6802429,6802853-6802934,
           6805476-6805853
          Length = 478

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = +3

Query: 285 PPPRXXXXFXXXPPPQXXXFFSXPXP 362
           PPP     F   PPP    FF+ P P
Sbjct: 46  PPPPVIRVFAAAPPPPRAAFFAPPPP 71


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,091,820
Number of Sequences: 37544
Number of extensions: 246122
Number of successful extensions: 1872
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 890
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1753
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)