Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_I09
         (913 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0686 - 30900748-30902167,30903442-30904742                       25   2.6  
07_03_1691 - 28726307-28726323,28726588-28726953,28727483-287275...    29   3.9  
07_01_0080 + 587674-588510                                             26   4.8  

>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 24.6 bits (51), Expect(2) = 2.6
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = -1

Query: 913 PXPXXGGGXFXXXKXPPPPPP 851
           P P  G       K PPPPPP
Sbjct: 338 PPPPKGPPPPPPAKGPPPPPP 358



 Score = 23.8 bits (49), Expect(2) = 2.6
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -1

Query: 868 PPPPPPXXXKK 836
           PPPPPP   KK
Sbjct: 364 PPPPPPPGGKK 374


>07_03_1691 -
           28726307-28726323,28726588-28726953,28727483-28727567,
           28728255-28728387,28729793-28730328
          Length = 378

 Score = 29.5 bits (63), Expect = 3.9
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -1

Query: 913 PXPXXGGGXFXXXKXPPPPPPXXXKKKKK 827
           P P  GGG       PPPPPP    ++ +
Sbjct: 29  PIPSCGGGGGGAGPTPPPPPPPPHHRRAR 57


>07_01_0080 + 587674-588510
          Length = 278

 Score = 26.2 bits (55), Expect(2) = 4.8
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = -1

Query: 913 PXPXXGGGXFXXXKXPPPPPP 851
           P    G G F     PPPPPP
Sbjct: 79  PPRLGGDGMFRRPPPPPPPPP 99



 Score = 21.4 bits (43), Expect(2) = 4.8
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -1

Query: 868 PPPPPPXXXKK 836
           PPPPPP   ++
Sbjct: 116 PPPPPPLFTRR 126


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,354,572
Number of Sequences: 37544
Number of extensions: 329685
Number of successful extensions: 3182
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1463
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2853
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)