Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP27_F_I07
(876 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0335 + 4409387-4410156,4410598-4410706 33 0.40
06_01_1137 + 9412230-9412378,9412549-9412634,9413417-9413496,941... 32 0.52
12_02_0982 - 25031778-25032122,25032388-25032534,25032693-250337... 32 0.69
05_07_0329 - 29308867-29308932,29309040-29309159,29309245-293093... 31 1.2
04_04_1144 + 31222556-31222633,31223238-31227665,31227724-312277... 31 1.6
02_04_0480 - 23274945-23275196,23275558-23275623,23276709-232768... 31 1.6
01_06_0852 + 32463784-32463834,32463957-32464628,32465515-324656... 30 2.1
10_01_0359 + 3956527-3956616,3957623-3957818,3958102-3959418,395... 30 2.8
01_06_0124 - 26692731-26697046,26698749-26698827,26698899-266989... 30 2.8
11_03_0226 - 11908455-11908562,11915971-11916240,11916463-119169... 29 4.9
11_04_0474 + 18162538-18163731,18163800-18163855,18163951-181640... 29 6.5
02_05_0886 + 32507324-32507938,32508103-32508252,32508498-325089... 28 8.5
>04_01_0335 + 4409387-4410156,4410598-4410706
Length = 292
Score = 32.7 bits (71), Expect = 0.40
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 8/79 (10%)
Frame = +2
Query: 215 INGDTDDIQHDKDKTQKKTAKHDSGV--------ADLEKVTDYAEEMEISSQDISGALSL 370
I+ DDIQH KD + T+ D G A LE++ Y E +S+ D+ +
Sbjct: 93 IDAGFDDIQHKKDAQEASTSVEDEGFKNVGGNYGAGLERIQFYDEGRNLSANDVE---MM 149
Query: 371 IGDRRNKEAAERLEKEQEL 427
+GD + ++EQ L
Sbjct: 150 MGDAAEHGSFHAQDEEQGL 168
>06_01_1137 +
9412230-9412378,9412549-9412634,9413417-9413496,
9413826-9413881,9414038-9414086,9414692-9414841,
9414993-9415088,9415442-9415555,9415655-9415785,
9416171-9416408,9416603-9416656,9417100-9417117,
9417906-9418722,9418797-9418846
Length = 695
Score = 32.3 bits (70), Expect = 0.52
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Frame = +2
Query: 224 DTDDIQHDK----DKTQKKTAKHDSGVADLEKVTDYAEEMEISSQDISGALSLIGDRRNK 391
+ DDI D+ D+T+KK++ H S +E ++ + + DI L+ + +NK
Sbjct: 298 EEDDILSDEDDFYDRTKKKSSSHKSSEQQVETADSLLDKKDTITSDIESKKKLVEEEKNK 357
Query: 392 EA 397
A
Sbjct: 358 LA 359
>12_02_0982 -
25031778-25032122,25032388-25032534,25032693-25033718,
25033758-25034227,25034393-25034471
Length = 688
Score = 31.9 bits (69), Expect = 0.69
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = +2
Query: 209 EEINGDTDDIQHDKDKTQKKTAKHDSGVADLEKVTDYAEEMEISSQDISGALSLIGDRRN 388
E+ + D+DD D + + A D+GV D + A E+E + D G + ++ D
Sbjct: 242 EDDDDDSDDHDGGPDDAEDEAAVQDAGVVD-DSGPGVAVELEHEAADQGGGVRVVDDSDG 300
Query: 389 KEAAER 406
+ AA R
Sbjct: 301 EGAAGR 306
>05_07_0329 -
29308867-29308932,29309040-29309159,29309245-29309364,
29309566-29310123,29310199-29310258,29310839-29310904,
29310993-29311103,29311167-29311257,29311349-29311449,
29311534-29311641,29311737-29314205
Length = 1289
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Frame = +2
Query: 245 DKDKTQKKTAKHDSGVADLEKVTDYAEEMEIS---SQDISGALSLIGDRR-NKEAAERLE 412
D K ++K + G D++K+ + EM+ + Q+ + R KE ERL+
Sbjct: 400 DAKKEEEKAVEAPKGKVDMKKLPKHVREMQEALARRQEAEERKKREEEERLRKEEEERLK 459
Query: 413 KEQELQKVSVQKR 451
KE+E +K KR
Sbjct: 460 KEEEERKAEEAKR 472
>04_04_1144 +
31222556-31222633,31223238-31227665,31227724-31227789,
31227790-31228014,31228097-31228255,31228393-31228551,
31228855-31229013,31229371-31229490,31229604-31229825
Length = 1871
Score = 30.7 bits (66), Expect = 1.6
Identities = 20/86 (23%), Positives = 45/86 (52%)
Frame = +2
Query: 182 KYNKLEMADEEINGDTDDIQHDKDKTQKKTAKHDSGVADLEKVTDYAEEMEISSQDISGA 361
K +LE + ++ + ++ ++ + + + +DLE++ +E ++S SG
Sbjct: 448 KILELEALLQTLHATEEALKLQLEEAEARVEVAEKKGSDLEQLLGESENKLVAS---SGE 504
Query: 362 LSLIGDRRNKEAAERLEKEQELQKVS 439
L L+ +R +EAA EKE+ L++ +
Sbjct: 505 LKLLEERVQQEAASSAEKEKLLEEAT 530
>02_04_0480 -
23274945-23275196,23275558-23275623,23276709-23276851,
23276947-23277063,23277219-23278683,23279561-23280730
Length = 1070
Score = 30.7 bits (66), Expect = 1.6
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +2
Query: 170 RRTCKYNKLEMADEEINGDTDDIQHDKDKTQKKTAKHD 283
R+ K N ADEE +DD++ D+ +KK ++HD
Sbjct: 112 RQDMKKNLRNDADEEKRKSSDDMRDGDDEEKKKRSRHD 149
>01_06_0852 +
32463784-32463834,32463957-32464628,32465515-32465627,
32465999-32466261,32466803-32466924,32467176-32467253,
32467353-32467409,32467590-32467658,32467903-32467947,
32468303-32468398
Length = 521
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +2
Query: 200 MADEEINGDTDDIQHDKDKTQKKTAKHDSGVADLEKVTDYAEEME 334
+ D+E +GD + K+K++K +AD E +TD+ + E
Sbjct: 474 LEDDEDDGDDAEDAEGKEKSKKDQLSLKEAIADSENLTDFLMDFE 518
>10_01_0359 + 3956527-3956616,3957623-3957818,3958102-3959418,
3959482-3960445,3960588-3960648,3961500-3961946
Length = 1024
Score = 29.9 bits (64), Expect = 2.8
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = +2
Query: 188 NKLEMADEEINGDTDDIQHDKDKTQKKTAKHDSGVADL-EKVTDYAEEMEISSQDISGAL 364
+++E+ +IN ++ ++ Q AK+ DL EK+ Y E SS D +
Sbjct: 817 SEIEVMHRQINTLRTELADERQNHQDDLAKY----RDLKEKIERYENEKNTSSVDEDAGV 872
Query: 365 SLIGDRRNKEAAERLEKEQE 424
+ D+ AAE+L + QE
Sbjct: 873 KIKQDKEIAAAAEKLAECQE 892
>01_06_0124 -
26692731-26697046,26698749-26698827,26698899-26698955,
26699321-26699416
Length = 1515
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/62 (17%), Positives = 34/62 (54%)
Frame = +2
Query: 251 DKTQKKTAKHDSGVADLEKVTDYAEEMEISSQDISGALSLIGDRRNKEAAERLEKEQELQ 430
++ + +KH + +LEK +E+E ++ D++ ++++ + +N ++E + E +
Sbjct: 425 EEKEMLVSKHSKCLTELEKAQSSVKELESTNGDLNDKIAVLQNEKNSLSSELQQLEASFE 484
Query: 431 KV 436
+
Sbjct: 485 NL 486
>11_03_0226 -
11908455-11908562,11915971-11916240,11916463-11916946,
11917148-11918060,11918628-11919300
Length = 815
Score = 29.1 bits (62), Expect = 4.9
Identities = 23/86 (26%), Positives = 41/86 (47%)
Frame = +2
Query: 188 NKLEMADEEINGDTDDIQHDKDKTQKKTAKHDSGVADLEKVTDYAEEMEISSQDISGALS 367
+++E E+ +GD DD D + K+ G + + D M + QD G
Sbjct: 556 DEVEFHFEKEDGDGDDGGLDNMEDGKENGNEKEG----DHMRDMNSGMILDGQD--GGSK 609
Query: 368 LIGDRRNKEAAERLEKEQELQKVSVQ 445
GD+ ++ A E+E+EL+K++ Q
Sbjct: 610 ENGDKMTEQEARVEEEEEELKKMADQ 635
>11_04_0474 +
18162538-18163731,18163800-18163855,18163951-18164011,
18164107-18165495,18166024-18166635,18166706-18166852,
18166941-18167209,18167322-18167412,18167500-18167757,
18168376-18168450,18168937-18168945
Length = 1386
Score = 28.7 bits (61), Expect = 6.5
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = +2
Query: 248 KDKTQKKTAKHDSGVADLEKVTDYAEEMEISSQDISGALSLIGDRRNKEAAERLEKEQEL 427
+D K + GVAD + ++AE + + G +S I R+NK E + E L
Sbjct: 667 RDPRLKFLNRDTGGVADANRRVNFAEPNPSKDRTMGGGVS-INSRKNKAVDEPMVDENAL 725
Query: 428 QK 433
++
Sbjct: 726 KR 727
>02_05_0886 +
32507324-32507938,32508103-32508252,32508498-32508935,
32509038-32509151,32509256-32509852
Length = 637
Score = 28.3 bits (60), Expect = 8.5
Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Frame = +2
Query: 203 ADEEINGDTDDIQH-DKDKTQKKTAKHDSGVADLEKVTDYAEEMEISSQDISGALSLIGD 379
++EEI T + ++DK A D D + V AEE + ++ G GD
Sbjct: 137 SNEEIKYRTQQAEMIEEDKQPAAAANVDDDGGDSDGVGASAEEKHMVTEATGGEGDDGGD 196
Query: 380 RRNKEAAERL-EKEQELQKVSVQKR 451
R A + L E ++E++++ + R
Sbjct: 197 SRTPMAQDELSEMQEEMERMKEENR 221
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,309,706
Number of Sequences: 37544
Number of extensions: 239062
Number of successful extensions: 618
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 586
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 608
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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