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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_I07
         (876 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr...    32   0.62 
AC026301-10|AAK68893.1| 1173|Caenorhabditis elegans Hypothetical...    32   0.62 
U29380-18|ABB88224.1|  733|Caenorhabditis elegans Zygote defecti...    31   0.82 
U29380-17|AAA68733.3|  736|Caenorhabditis elegans Zygote defecti...    31   0.82 
U29380-16|AAS60254.1|  761|Caenorhabditis elegans Zygote defecti...    31   0.82 
U29380-15|AAS60253.1|  777|Caenorhabditis elegans Zygote defecti...    31   0.82 
AY487140-1|AAR32790.1|  733|Caenorhabditis elegans centrosome at...    31   0.82 
Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical p...    30   1.9  
Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical pr...    30   1.9  
Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue...    30   1.9  
Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical pr...    29   3.3  
Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical pr...    29   3.3  
U88311-7|AAB42348.1| 1173|Caenorhabditis elegans Lethal protein ...    29   3.3  
U85515-1|AAB42081.1| 1173|Caenorhabditis elegans LET-502 protein.      29   3.3  
Z83122-10|CAB05601.1|  896|Caenorhabditis elegans Hypothetical p...    29   4.4  
Z83122-9|CAB05598.1|  906|Caenorhabditis elegans Hypothetical pr...    29   4.4  
Z68008-2|CAD44147.1|  142|Caenorhabditis elegans Hypothetical pr...    29   4.4  
AL021175-6|CAA15968.1|  363|Caenorhabditis elegans Hypothetical ...    29   4.4  
Z68114-10|CAA92157.2|  322|Caenorhabditis elegans Hypothetical p...    28   7.6  
D38541-1|BAA07544.1|  284|Caenorhabditis elegans CeTMII protein.       28   7.6  
D38540-1|BAA07543.1|  284|Caenorhabditis elegans CeTMI protein.        28   7.6  
D38539-2|BAA07541.1|  284|Caenorhabditis elegans CeTMII protein.       28   7.6  
D38539-1|BAA07540.1|  284|Caenorhabditis elegans CeTMI protein.        28   7.6  
AL132877-4|CAC70112.1|  284|Caenorhabditis elegans Hypothetical ...    28   7.6  
AL132877-1|CAC70114.1|  284|Caenorhabditis elegans Hypothetical ...    28   7.6  

>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
           translation initiationfactor eIF5B protein.
          Length = 1074

 Score = 31.9 bits (69), Expect = 0.62
 Identities = 25/76 (32%), Positives = 39/76 (51%)
 Frame = +2

Query: 206 DEEINGDTDDIQHDKDKTQKKTAKHDSGVADLEKVTDYAEEMEISSQDISGALSLIGDRR 385
           +E+ +G+ D+   DK K +KK  K D      EK     E+ +  +    G LSLI +  
Sbjct: 168 EEDSDGEGDEKDQDK-KDKKKQKKKDK---KKEKEKKEKEDKKGGAGAKKGNLSLIKEML 223

Query: 386 NKEAAERLEKEQELQK 433
            K+  ER E+++ LQK
Sbjct: 224 KKQQEER-EEQERLQK 238


>AC026301-10|AAK68893.1| 1173|Caenorhabditis elegans Hypothetical
           protein Y54F10BM.2 protein.
          Length = 1173

 Score = 31.9 bits (69), Expect = 0.62
 Identities = 25/76 (32%), Positives = 39/76 (51%)
 Frame = +2

Query: 206 DEEINGDTDDIQHDKDKTQKKTAKHDSGVADLEKVTDYAEEMEISSQDISGALSLIGDRR 385
           +E+ +G+ D+   DK K +KK  K D      EK     E+ +  +    G LSLI +  
Sbjct: 168 EEDSDGEGDEKDQDK-KDKKKQKKKDK---KKEKEKKEKEDKKGGAGAKKGNLSLIKEML 223

Query: 386 NKEAAERLEKEQELQK 433
            K+  ER E+++ LQK
Sbjct: 224 KKQQEER-EEQERLQK 238


>U29380-18|ABB88224.1|  733|Caenorhabditis elegans Zygote defective:
           embryonic lethalprotein 12, isoform d protein.
          Length = 733

 Score = 31.5 bits (68), Expect = 0.82
 Identities = 21/84 (25%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
 Frame = +2

Query: 197 EMADEEINGDTDDIQHDKDKTQKKTAKHDSGVADLEKVTDYAEEMEISSQDISGALSLIG 376
           +M + ++  +T+  Q D +  +K+TA+ +     L+K     +E+E +S+ +S   S+  
Sbjct: 591 QMREAKMRAETNQAQVD-EILKKRTAELEVNATALQKAKAVIDELEYNSRPVSED-SMTS 648

Query: 377 DRRNKEAAERLEK-EQELQKVSVQ 445
            +  KE  E  EK  Q+++K+ ++
Sbjct: 649 VQAFKEMKEENEKLRQKVEKLEIE 672


>U29380-17|AAA68733.3|  736|Caenorhabditis elegans Zygote defective:
           embryonic lethalprotein 12, isoform a protein.
          Length = 736

 Score = 31.5 bits (68), Expect = 0.82
 Identities = 21/84 (25%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
 Frame = +2

Query: 197 EMADEEINGDTDDIQHDKDKTQKKTAKHDSGVADLEKVTDYAEEMEISSQDISGALSLIG 376
           +M + ++  +T+  Q D +  +K+TA+ +     L+K     +E+E +S+ +S   S+  
Sbjct: 594 QMREAKMRAETNQAQVD-EILKKRTAELEVNATALQKAKAVIDELEYNSRPVSED-SMTS 651

Query: 377 DRRNKEAAERLEK-EQELQKVSVQ 445
            +  KE  E  EK  Q+++K+ ++
Sbjct: 652 VQAFKEMKEENEKLRQKVEKLEIE 675


>U29380-16|AAS60254.1|  761|Caenorhabditis elegans Zygote defective:
           embryonic lethalprotein 12, isoform c protein.
          Length = 761

 Score = 31.5 bits (68), Expect = 0.82
 Identities = 21/84 (25%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
 Frame = +2

Query: 197 EMADEEINGDTDDIQHDKDKTQKKTAKHDSGVADLEKVTDYAEEMEISSQDISGALSLIG 376
           +M + ++  +T+  Q D +  +K+TA+ +     L+K     +E+E +S+ +S   S+  
Sbjct: 594 QMREAKMRAETNQAQVD-EILKKRTAELEVNATALQKAKAVIDELEYNSRPVSED-SMTS 651

Query: 377 DRRNKEAAERLEK-EQELQKVSVQ 445
            +  KE  E  EK  Q+++K+ ++
Sbjct: 652 VQAFKEMKEENEKLRQKVEKLEIE 675


>U29380-15|AAS60253.1|  777|Caenorhabditis elegans Zygote defective:
           embryonic lethalprotein 12, isoform b protein.
          Length = 777

 Score = 31.5 bits (68), Expect = 0.82
 Identities = 21/84 (25%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
 Frame = +2

Query: 197 EMADEEINGDTDDIQHDKDKTQKKTAKHDSGVADLEKVTDYAEEMEISSQDISGALSLIG 376
           +M + ++  +T+  Q D +  +K+TA+ +     L+K     +E+E +S+ +S   S+  
Sbjct: 594 QMREAKMRAETNQAQVD-EILKKRTAELEVNATALQKAKAVIDELEYNSRPVSED-SMTS 651

Query: 377 DRRNKEAAERLEK-EQELQKVSVQ 445
            +  KE  E  EK  Q+++K+ ++
Sbjct: 652 VQAFKEMKEENEKLRQKVEKLEIE 675


>AY487140-1|AAR32790.1|  733|Caenorhabditis elegans centrosome
           attachment protein A protein.
          Length = 733

 Score = 31.5 bits (68), Expect = 0.82
 Identities = 21/84 (25%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
 Frame = +2

Query: 197 EMADEEINGDTDDIQHDKDKTQKKTAKHDSGVADLEKVTDYAEEMEISSQDISGALSLIG 376
           +M + ++  +T+  Q D +  +K+TA+ +     L+K     +E+E +S+ +S   S+  
Sbjct: 591 QMREAKMRAETNQAQVD-EILKKRTAELEVNATALQKAKAVIDELEYNSRPVSED-SMTS 648

Query: 377 DRRNKEAAERLEK-EQELQKVSVQ 445
            +  KE  E  EK  Q+++K+ ++
Sbjct: 649 VQAFKEMKEENEKLRQKVEKLEIE 672


>Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical
           protein T04H1.4b protein.
          Length = 1312

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 18/67 (26%), Positives = 33/67 (49%)
 Frame = +2

Query: 224 DTDDIQHDKDKTQKKTAKHDSGVADLEKVTDYAEEMEISSQDISGALSLIGDRRNKEAAE 403
           +TD+++  K   QKK  +  + + +LE      ++ E+  Q++   LSLI         E
Sbjct: 253 ETDELKERKANGQKKIEEMRTSIHELEDTLTSFKKTELERQNLKKQLSLIRVEPYFGTEE 312

Query: 404 RLEKEQE 424
            L++E E
Sbjct: 313 ELKREIE 319


>Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical
           protein T04H1.4a protein.
          Length = 1298

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 18/67 (26%), Positives = 33/67 (49%)
 Frame = +2

Query: 224 DTDDIQHDKDKTQKKTAKHDSGVADLEKVTDYAEEMEISSQDISGALSLIGDRRNKEAAE 403
           +TD+++  K   QKK  +  + + +LE      ++ E+  Q++   LSLI         E
Sbjct: 239 ETDELKERKANGQKKIEEMRTSIHELEDTLTSFKKTELERQNLKKQLSLIRVEPYFGTEE 298

Query: 404 RLEKEQE 424
            L++E E
Sbjct: 299 ELKREIE 305


>Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue
           ceRAD50 protein.
          Length = 1298

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 18/67 (26%), Positives = 33/67 (49%)
 Frame = +2

Query: 224 DTDDIQHDKDKTQKKTAKHDSGVADLEKVTDYAEEMEISSQDISGALSLIGDRRNKEAAE 403
           +TD+++  K   QKK  +  + + +LE      ++ E+  Q++   LSLI         E
Sbjct: 239 ETDELKERKANGQKKIEEMRTSIHELEDTLTSFKKTELERQNLKKQLSLIRVEPYFGTEE 298

Query: 404 RLEKEQE 424
            L++E E
Sbjct: 299 ELKREIE 305


>Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical
           protein F59A2.6 protein.
          Length = 1133

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
 Frame = +2

Query: 191 KLEMADEEINGDTDDIQHDKDKTQKKTAKHDSGVADLEKVTDYAEEMEISSQDISG---- 358
           KLE ++EE+      IQ   +K ++   +  +   +LE V+   +  E S ++ S     
Sbjct: 138 KLEQSEEEVLAARGAIQELTEKLEESEKETSTAKTELEAVSKKLDSSETSLKEFSDMIEA 197

Query: 359 -ALSLIGDRRNKEAAERLEKEQELQKV 436
             + LI   + K+ A  L K Q+L++V
Sbjct: 198 MKIQLINCEKQKDEAVELLK-QKLEEV 223


>Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical
           protein F59A2.6 protein.
          Length = 1133

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
 Frame = +2

Query: 191 KLEMADEEINGDTDDIQHDKDKTQKKTAKHDSGVADLEKVTDYAEEMEISSQDISG---- 358
           KLE ++EE+      IQ   +K ++   +  +   +LE V+   +  E S ++ S     
Sbjct: 138 KLEQSEEEVLAARGAIQELTEKLEESEKETSTAKTELEAVSKKLDSSETSLKEFSDMIEA 197

Query: 359 -ALSLIGDRRNKEAAERLEKEQELQKV 436
             + LI   + K+ A  L K Q+L++V
Sbjct: 198 MKIQLINCEKQKDEAVELLK-QKLEEV 223


>U88311-7|AAB42348.1| 1173|Caenorhabditis elegans Lethal protein 502
           protein.
          Length = 1173

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 19/87 (21%), Positives = 37/87 (42%)
 Frame = +2

Query: 191 KLEMADEEINGDTDDIQHDKDKTQKKTAKHDSGVADLEKVTDYAEEMEISSQDISGALSL 370
           K+   + E+  + D ++H  D      AK +    +L    +Y  EME            
Sbjct: 482 KISDLERELKDNKDKLRHGADSD----AKVNELAVELRMSKEYNSEMESELSKFRDKCEQ 537

Query: 371 IGDRRNKEAAERLEKEQELQKVSVQKR 451
           + +   K++ E  +++ E Q+V  QK+
Sbjct: 538 LKEDLRKKSGELAQEKNETQRVFQQKK 564


>U85515-1|AAB42081.1| 1173|Caenorhabditis elegans LET-502 protein.
          Length = 1173

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 19/87 (21%), Positives = 37/87 (42%)
 Frame = +2

Query: 191 KLEMADEEINGDTDDIQHDKDKTQKKTAKHDSGVADLEKVTDYAEEMEISSQDISGALSL 370
           K+   + E+  + D ++H  D      AK +    +L    +Y  EME            
Sbjct: 482 KISDLERELKDNKDKLRHGADSD----AKVNELAVELRMSKEYNSEMESELSKFRDKCEQ 537

Query: 371 IGDRRNKEAAERLEKEQELQKVSVQKR 451
           + +   K++ E  +++ E Q+V  QK+
Sbjct: 538 LKEDLRKKSGELAQEKNETQRVFQQKK 564


>Z83122-10|CAB05601.1|  896|Caenorhabditis elegans Hypothetical
           protein R11A5.1b protein.
          Length = 896

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 22/87 (25%), Positives = 42/87 (48%)
 Frame = +2

Query: 191 KLEMADEEINGDTDDIQHDKDKTQKKTAKHDSGVADLEKVTDYAEEMEISSQDISGALSL 370
           KL+ +DEE + D +D + D+D+ ++   + D    + E+  +  EE E    + S   S 
Sbjct: 568 KLDDSDEEEDDDDEDEEEDEDEEEEDEDEED----EEEEENESEEEEEDDEDEESEEESD 623

Query: 371 IGDRRNKEAAERLEKEQELQKVSVQKR 451
             D   +E  +   +E+   K S +K+
Sbjct: 624 EEDEEEEEEDDSEPEEKPNPKPSTKKQ 650


>Z83122-9|CAB05598.1|  906|Caenorhabditis elegans Hypothetical
           protein R11A5.1a protein.
          Length = 906

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 22/87 (25%), Positives = 42/87 (48%)
 Frame = +2

Query: 191 KLEMADEEINGDTDDIQHDKDKTQKKTAKHDSGVADLEKVTDYAEEMEISSQDISGALSL 370
           KL+ +DEE + D +D + D+D+ ++   + D    + E+  +  EE E    + S   S 
Sbjct: 578 KLDDSDEEEDDDDEDEEEDEDEEEEDEDEED----EEEEENESEEEEEDDEDEESEEESD 633

Query: 371 IGDRRNKEAAERLEKEQELQKVSVQKR 451
             D   +E  +   +E+   K S +K+
Sbjct: 634 EEDEEEEEEDDSEPEEKPNPKPSTKKQ 660


>Z68008-2|CAD44147.1|  142|Caenorhabditis elegans Hypothetical
           protein R08B4.4 protein.
          Length = 142

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 15/52 (28%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
 Frame = -3

Query: 328 FFSIISNFFQVRHSA-IMFS-GFLLSF-VFVMLNIICITIDFFVCHF*FIIF 182
           F +  +++F+   +  + F+ G+L++  +F+ LN  C+ + FF+C    IIF
Sbjct: 4   FKAFQTSYFEANDACKLQFAPGWLVATSIFMYLNFACVLLTFFICIIGLIIF 55


>AL021175-6|CAA15968.1|  363|Caenorhabditis elegans Hypothetical
           protein Y6E2A.7 protein.
          Length = 363

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 13/37 (35%), Positives = 23/37 (62%)
 Frame = +2

Query: 308 VTDYAEEMEISSQDISGALSLIGDRRNKEAAERLEKE 418
           VTD + EM++ +Q+  GA  L+  + N+E    ++KE
Sbjct: 319 VTDNSFEMKLKAQEAEGAAKLLEAQSNRENTNFVKKE 355


>Z68114-10|CAA92157.2|  322|Caenorhabditis elegans Hypothetical
           protein F17A2.13 protein.
          Length = 322

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +2

Query: 230 DDIQHDKDKTQKKTAKHDSGVADLEKVTDYAEEMEISSQD 349
           +DI    +K +KK+A HD  +  L KV+   ++ E    D
Sbjct: 20  EDIMFTPNKDKKKSAFHDETLNSLRKVSRLVQKFESGGTD 59


>D38541-1|BAA07544.1|  284|Caenorhabditis elegans CeTMII protein.
          Length = 284

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
 Frame = +2

Query: 191 KLEMADEEINGDTDDIQHDKDKTQKKTAKH-DSGVADLEKVTDYAEEMEISSQDISGALS 367
           KLE  +EE+         D  K   +T    D    DL   T   EE E + Q+    ++
Sbjct: 35  KLERVEEEL--------RDTQKKMTQTGDDLDKAQEDLSAATSKLEEKEKTVQEAEAEVA 86

Query: 368 LIGDRRNKEAAERLEKEQELQKVSVQK 448
            + +RR     E LE+ +E  K++ +K
Sbjct: 87  SL-NRRMTLLEEELERAEERLKIATEK 112


>D38540-1|BAA07543.1|  284|Caenorhabditis elegans CeTMI protein.
          Length = 284

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
 Frame = +2

Query: 191 KLEMADEEINGDTDDIQHDKDKTQKKTAKH-DSGVADLEKVTDYAEEMEISSQDISGALS 367
           KLE  +EE+         D  K   +T    D    DL   T   EE E + Q+    ++
Sbjct: 35  KLERVEEEL--------RDTQKKMTQTGDDLDKAQEDLSAATSKLEEKEKTVQEAEAEVA 86

Query: 368 LIGDRRNKEAAERLEKEQELQKVSVQK 448
            + +RR     E LE+ +E  K++ +K
Sbjct: 87  SL-NRRMTLLEEELERAEERLKIATEK 112


>D38539-2|BAA07541.1|  284|Caenorhabditis elegans CeTMII protein.
          Length = 284

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
 Frame = +2

Query: 191 KLEMADEEINGDTDDIQHDKDKTQKKTAKH-DSGVADLEKVTDYAEEMEISSQDISGALS 367
           KLE  +EE+         D  K   +T    D    DL   T   EE E + Q+    ++
Sbjct: 35  KLERVEEEL--------RDTQKKMTQTGDDLDKAQEDLSAATSKLEEKEKTVQEAEAEVA 86

Query: 368 LIGDRRNKEAAERLEKEQELQKVSVQK 448
            + +RR     E LE+ +E  K++ +K
Sbjct: 87  SL-NRRMTLLEEELERAEERLKIATEK 112


>D38539-1|BAA07540.1|  284|Caenorhabditis elegans CeTMI protein.
          Length = 284

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
 Frame = +2

Query: 191 KLEMADEEINGDTDDIQHDKDKTQKKTAKH-DSGVADLEKVTDYAEEMEISSQDISGALS 367
           KLE  +EE+         D  K   +T    D    DL   T   EE E + Q+    ++
Sbjct: 35  KLERVEEEL--------RDTQKKMTQTGDDLDKAQEDLSAATSKLEEKEKTVQEAEAEVA 86

Query: 368 LIGDRRNKEAAERLEKEQELQKVSVQK 448
            + +RR     E LE+ +E  K++ +K
Sbjct: 87  SL-NRRMTLLEEELERAEERLKIATEK 112


>AL132877-4|CAC70112.1|  284|Caenorhabditis elegans Hypothetical
           protein Y105E8B.1d protein.
          Length = 284

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
 Frame = +2

Query: 191 KLEMADEEINGDTDDIQHDKDKTQKKTAKH-DSGVADLEKVTDYAEEMEISSQDISGALS 367
           KLE  +EE+         D  K   +T    D    DL   T   EE E + Q+    ++
Sbjct: 35  KLERVEEEL--------RDTQKKMTQTGDDLDKAQEDLSAATSKLEEKEKTVQEAEAEVA 86

Query: 368 LIGDRRNKEAAERLEKEQELQKVSVQK 448
            + +RR     E LE+ +E  K++ +K
Sbjct: 87  SL-NRRMTLLEEELERAEERLKIATEK 112


>AL132877-1|CAC70114.1|  284|Caenorhabditis elegans Hypothetical
           protein Y105E8B.1a protein.
          Length = 284

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
 Frame = +2

Query: 191 KLEMADEEINGDTDDIQHDKDKTQKKTAKH-DSGVADLEKVTDYAEEMEISSQDISGALS 367
           KLE  +EE+         D  K   +T    D    DL   T   EE E + Q+    ++
Sbjct: 35  KLERVEEEL--------RDTQKKMTQTGDDLDKAQEDLSAATSKLEEKEKTVQEAEAEVA 86

Query: 368 LIGDRRNKEAAERLEKEQELQKVSVQK 448
            + +RR     E LE+ +E  K++ +K
Sbjct: 87  SL-NRRMTLLEEELERAEERLKIATEK 112


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,398,158
Number of Sequences: 27780
Number of extensions: 201766
Number of successful extensions: 776
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 722
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 763
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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