Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_I02
         (693 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0618 + 18988614-18989102,18989913-18990314,18990555-189908...    29   2.6  
07_01_0479 + 3606663-3607448                                           29   4.6  
07_03_1136 + 24218601-24218734,24218769-24219906                       28   6.1  
02_05_0686 - 30900748-30902167,30903442-30904742                       28   6.1  
06_03_0874 - 25580417-25580419,25580504-25580604,25580828-255814...    28   8.1  
06_02_0046 + 10928708-10928798,10929997-10930077,10930567-109306...    28   8.1  

>09_04_0618 +
           18988614-18989102,18989913-18990314,18990555-18990806,
           18991564-18991941,18992350-18992426,18992700-18992808,
           18993424-18993574,18993810-18993903,18997072-18997474,
           18997590-18997742,18998115-18998474
          Length = 955

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 15/31 (48%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
 Frame = -1

Query: 381 KKXXGGGXPP-PPXGNXXXPPXXENQKXTPP 292
           K   GGG PP PP GN   PP    Q+  PP
Sbjct: 408 KPHPGGGMPPYPPGGN--APPHHPRQEPAPP 436


>07_01_0479 + 3606663-3607448
          Length = 261

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 11/24 (45%), Positives = 12/24 (50%)
 Frame = -3

Query: 367 GGXPPPPXGXXFXPPXXGEPKXNP 296
           GG PPPP      PP  G P+  P
Sbjct: 199 GGPPPPPGPFMRGPPPMGPPQVRP 222


>07_03_1136 + 24218601-24218734,24218769-24219906
          Length = 423

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 16/44 (36%), Positives = 16/44 (36%), Gaps = 1/44 (2%)
 Frame = +3

Query: 291 PGGFXFGSPXXGGXKXXP-XGGGGXPPXFXFXXXXKXXXXPPPP 419
           PGG     P  GG    P  GGGG PP             PP P
Sbjct: 92  PGGGGAPGPLGGGGARPPGGGGGGGPPSLPPGAGGGGGARPPAP 135


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 11/22 (50%), Positives = 11/22 (50%)
 Frame = -3

Query: 358 PPPPXGXXFXPPXXGEPKXNPP 293
           PPPP G    PP  G P   PP
Sbjct: 338 PPPPKGPPPPPPAKGPPPPPPP 359


>06_03_0874 -
           25580417-25580419,25580504-25580604,25580828-25581411,
           25581523-25581594,25581667-25581793,25583412-25583516,
           25583643-25583676
          Length = 341

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = -3

Query: 358 PPPPXGXXFXPPXXGEPKXNPPG 290
           PP P G  + PP  G+P   PPG
Sbjct: 287 PPQPYGQTYPPPPKGQPTY-PPG 308


>06_02_0046 +
           10928708-10928798,10929997-10930077,10930567-10930685,
           10931275-10931894,10931992-10933184,10933280-10933359,
           10933751-10933846,10933931-10934004,10936007-10936151,
           10936323-10936487
          Length = 887

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = -1

Query: 357 PPPPXGNXXXPPXXENQKXTPP 292
           PPPP      PP  EN+   PP
Sbjct: 495 PPPPEDEWIPPPPPENEPAPPP 516


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,654,015
Number of Sequences: 37544
Number of extensions: 338395
Number of successful extensions: 887
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 503
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 802
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1768474200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)