Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_H23
         (892 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0120 - 957365-957552,957642-957780,957847-957970,958398-95...   122   3e-28
08_01_0119 - 951492-951679,951780-951918,952023-952095,952196-95...   122   3e-28
07_03_0978 + 23099690-23100108,23100530-23100564,23100868-231009...   109   4e-24
02_05_0301 - 27687297-27687547,27687637-27687775,27689150-27689416    107   1e-23
01_06_1243 - 35681569-35681712,35681799-35681904,35682054-356821...    35   0.100
05_03_0230 - 10687056-10687059,10687108-10687203,10688392-106885...    30   2.1  
01_05_0510 - 22816607-22816916,22817005-22817177,22817341-228176...    29   5.0  
03_06_0600 + 34988743-34989407,34990033-34990051                       29   6.6  

>08_01_0120 -
           957365-957552,957642-957780,957847-957970,958398-958486
          Length = 179

 Score =  122 bits (295), Expect = 3e-28
 Identities = 56/67 (83%), Positives = 61/67 (91%)
 Frame = +1

Query: 364 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKS 543
           I+KA GLAP++PEDLY+LIKKAVA+RKHLERNRKDKDSKFRLILVESRIHRLARYYK   
Sbjct: 113 ILKAHGLAPEIPEDLYFLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKRTK 172

Query: 544 VLPPNWK 564
            LPP WK
Sbjct: 173 KLPPTWK 179



 Score = 65.7 bits (153), Expect = 5e-11
 Identities = 38/77 (49%), Positives = 45/77 (58%), Gaps = 17/77 (22%)
 Frame = +3

Query: 183 SALPYRRSVPTWLKLTADDV-----------------KEQIYKLGKKGLTPSQIGVMLRD 311
           SALPY+R+ P+WLK  A DV                 +E I K  KKG  PSQIGV+LRD
Sbjct: 36  SALPYKRTPPSWLKTAASDVGAFSFLSLSRLALFHLVEEMIMKAAKKGQMPSQIGVVLRD 95

Query: 312 SHGVAQVRFVTGKKILR 362
            HG+  V+ VTG KILR
Sbjct: 96  QHGIPLVKSVTGSKILR 112


>08_01_0119 -
           951492-951679,951780-951918,952023-952095,952196-952218
          Length = 140

 Score =  122 bits (295), Expect = 3e-28
 Identities = 56/67 (83%), Positives = 61/67 (91%)
 Frame = +1

Query: 364 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKS 543
           I+KA GLAP++PEDLY+LIKKAVA+RKHLERNRKDKDSKFRLILVESRIHRLARYYK   
Sbjct: 74  ILKAHGLAPEIPEDLYFLIKKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKRTK 133

Query: 544 VLPPNWK 564
            LPP WK
Sbjct: 134 KLPPTWK 140



 Score = 80.2 bits (189), Expect = 2e-15
 Identities = 36/60 (60%), Positives = 45/60 (75%)
 Frame = +3

Query: 183 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 362
           SA+PY+R+ P+W+K  A DV+E I K  KKG  PSQIGV+LRD HG+  V+ VTG KILR
Sbjct: 14  SAIPYKRTPPSWVKTAAADVEEMIMKAAKKGQMPSQIGVVLRDQHGIPLVKSVTGSKILR 73


>07_03_0978 +
           23099690-23100108,23100530-23100564,23100868-23100926,
           23101269-23101310,23102003-23102065,23102172-23102253,
           23102570-23102609,23102657-23102753
          Length = 278

 Score =  109 bits (261), Expect = 4e-24
 Identities = 48/67 (71%), Positives = 59/67 (88%)
 Frame = +1

Query: 364 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKS 543
           ++K+ GLAP++PEDLY+LIKKAVAMRKHLERNRKDKD+KFRLILVESR+HRL RYY+   
Sbjct: 74  VLKSRGLAPEVPEDLYFLIKKAVAMRKHLERNRKDKDTKFRLILVESRVHRLTRYYRLAK 133

Query: 544 VLPPNWK 564
            +P  +K
Sbjct: 134 KIPAFFK 140



 Score = 73.7 bits (173), Expect = 2e-13
 Identities = 33/60 (55%), Positives = 43/60 (71%)
 Frame = +3

Query: 183 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 362
           S LPYRR+ P W+K +A +V+E I ++ KKG  PSQIG +LRD+H V   + VTG KILR
Sbjct: 14  SVLPYRRAAPAWVKTSASEVEEMIVRVAKKGQLPSQIGAILRDAHAVPLAQGVTGGKILR 73


>02_05_0301 - 27687297-27687547,27687637-27687775,27689150-27689416
          Length = 218

 Score =  107 bits (257), Expect = 1e-23
 Identities = 51/64 (79%), Positives = 55/64 (85%)
 Frame = +1

Query: 364 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKS 543
           I+KA GLAP + EDLY+LIKKAVA+RKHLERNRKDKDS FRLILVESRIHRL RYYK   
Sbjct: 131 ILKAHGLAPKILEDLYFLIKKAVAIRKHLERNRKDKDSSFRLILVESRIHRLVRYYKRTK 190

Query: 544 VLPP 555
            LPP
Sbjct: 191 KLPP 194



 Score = 40.7 bits (91), Expect = 0.002
 Identities = 19/41 (46%), Positives = 25/41 (60%)
 Frame = +3

Query: 237 DVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKIL 359
           +V+E I K  K G   SQIGV+LR  HG+  V+ +   KIL
Sbjct: 89  EVEEMIMKAAKMGQMSSQIGVVLRHQHGIPLVKSIASSKIL 129


>01_06_1243 -
           35681569-35681712,35681799-35681904,35682054-35682149,
           35682234-35682361,35683000-35683260,35683343-35683428,
           35683524-35683616,35683720-35683815,35683946-35684300
          Length = 454

 Score = 34.7 bits (76), Expect = 0.100
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = -3

Query: 221 QPGRDTAAVRQRRXGRYPYQERAYDPCLRLFT 126
           +P  +TA+++    GRYP+  RAYDPC   ++
Sbjct: 281 KPCNNTASLKLGLGGRYPWLSRAYDPCTERYS 312


>05_03_0230 -
           10687056-10687059,10687108-10687203,10688392-10688519,
           10688688-10688966,10689290-10689375,10689655-10689750,
           10689859-10690243
          Length = 357

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
 Frame = -3

Query: 206 TAAVRQRRX--GRYPYQERAYDPCLRLFT 126
           +AA RQRR   G YP+   +YDPC   ++
Sbjct: 269 SAAARQRRLKQGHYPWMTGSYDPCTERYS 297


>01_05_0510 -
          22816607-22816916,22817005-22817177,22817341-22817607,
          22817951-22818393,22818474-22818635,22820991-22821414,
          22823177-22823227
          Length = 609

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = -3

Query: 95 ESKKDGCRKTKXXQKSXKGXPRRRG 21
          E  KDGC+  K  QK+ KG P  RG
Sbjct: 16 EKVKDGCQWRKYGQKTAKGNPWPRG 40


>03_06_0600 + 34988743-34989407,34990033-34990051
          Length = 227

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 18/69 (26%), Positives = 29/69 (42%), Gaps = 4/69 (5%)
 Frame = +2

Query: 140 NMGRMHAPGKGISQXGAALPPQCPYLV---EIDCRRCKGTNLQTWKEGSHSLT-NWCNAE 307
           N+  +H PG   S   +  PP  P       I CR+C+G+      +G   +    CN  
Sbjct: 134 NLSLLHPPGSAASPSVSCPPPPPPPPPGPRRISCRKCRGSFFTVVGDGVSGVNCVHCNRW 193

Query: 308 GFTWSCPSK 334
              + CP++
Sbjct: 194 VSLFPCPAR 202


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,374,166
Number of Sequences: 37544
Number of extensions: 348679
Number of successful extensions: 828
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 827
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)