Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP27_F_H23
(892 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X79239-1|CAA55821.1| 151|Homo sapiens ribosomal protein S13 pro... 151 3e-36
L01124-1|AAA60283.1| 151|Homo sapiens ribosomal protein S13 pro... 151 3e-36
D88010-1|BAA13528.1| 151|Homo sapiens ribosomal protein S13 pro... 151 3e-36
BC100032-1|AAI00033.1| 151|Homo sapiens ribosomal protein S13 p... 151 3e-36
BC066322-1|AAH66322.1| 151|Homo sapiens ribosomal protein S13 p... 151 3e-36
BC029732-1|AAH29732.1| 151|Homo sapiens ribosomal protein S13 p... 151 3e-36
BC006772-1|AAH06772.1| 151|Homo sapiens ribosomal protein S13 p... 151 3e-36
BC000475-1|AAH00475.1| 151|Homo sapiens ribosomal protein S13 p... 151 3e-36
L05090-1|AAC15854.1| 116|Homo sapiens ribosomal protein S13 pro... 119 1e-26
>X79239-1|CAA55821.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 151 bits (366), Expect = 3e-36
Identities = 70/78 (89%), Positives = 76/78 (97%)
Frame = +1
Query: 364 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKS 543
I+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHRLARYYKTK
Sbjct: 74 ILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKR 133
Query: 544 VLPPNWKYESSTASALVA 597
VLPPNWKYESSTASALVA
Sbjct: 134 VLPPNWKYESSTASALVA 151
Score = 119 bits (287), Expect = 1e-26
Identities = 56/60 (93%), Positives = 58/60 (96%)
Frame = +3
Query: 183 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 362
SALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGVAQVRFVTG KILR
Sbjct: 14 SALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILR 73
Score = 32.7 bits (71), Expect = 1.8
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +2
Query: 143 MGRMHAPGKGISQXGAALP 199
MGRMHAPGKG+SQ +ALP
Sbjct: 1 MGRMHAPGKGLSQ--SALP 17
>L01124-1|AAA60283.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 151 bits (366), Expect = 3e-36
Identities = 70/78 (89%), Positives = 76/78 (97%)
Frame = +1
Query: 364 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKS 543
I+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHRLARYYKTK
Sbjct: 74 ILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKR 133
Query: 544 VLPPNWKYESSTASALVA 597
VLPPNWKYESSTASALVA
Sbjct: 134 VLPPNWKYESSTASALVA 151
Score = 119 bits (287), Expect = 1e-26
Identities = 56/60 (93%), Positives = 58/60 (96%)
Frame = +3
Query: 183 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 362
SALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGVAQVRFVTG KILR
Sbjct: 14 SALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILR 73
Score = 32.7 bits (71), Expect = 1.8
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +2
Query: 143 MGRMHAPGKGISQXGAALP 199
MGRMHAPGKG+SQ +ALP
Sbjct: 1 MGRMHAPGKGLSQ--SALP 17
>D88010-1|BAA13528.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 151 bits (366), Expect = 3e-36
Identities = 70/78 (89%), Positives = 76/78 (97%)
Frame = +1
Query: 364 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKS 543
I+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHRLARYYKTK
Sbjct: 74 ILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKR 133
Query: 544 VLPPNWKYESSTASALVA 597
VLPPNWKYESSTASALVA
Sbjct: 134 VLPPNWKYESSTASALVA 151
Score = 119 bits (287), Expect = 1e-26
Identities = 56/60 (93%), Positives = 58/60 (96%)
Frame = +3
Query: 183 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 362
SALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGVAQVRFVTG KILR
Sbjct: 14 SALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILR 73
Score = 32.7 bits (71), Expect = 1.8
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +2
Query: 143 MGRMHAPGKGISQXGAALP 199
MGRMHAPGKG+SQ +ALP
Sbjct: 1 MGRMHAPGKGLSQ--SALP 17
>BC100032-1|AAI00033.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 151 bits (366), Expect = 3e-36
Identities = 70/78 (89%), Positives = 76/78 (97%)
Frame = +1
Query: 364 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKS 543
I+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHRLARYYKTK
Sbjct: 74 ILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKR 133
Query: 544 VLPPNWKYESSTASALVA 597
VLPPNWKYESSTASALVA
Sbjct: 134 VLPPNWKYESSTASALVA 151
Score = 119 bits (287), Expect = 1e-26
Identities = 56/60 (93%), Positives = 58/60 (96%)
Frame = +3
Query: 183 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 362
SALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGVAQVRFVTG KILR
Sbjct: 14 SALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILR 73
Score = 32.7 bits (71), Expect = 1.8
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +2
Query: 143 MGRMHAPGKGISQXGAALP 199
MGRMHAPGKG+SQ +ALP
Sbjct: 1 MGRMHAPGKGLSQ--SALP 17
>BC066322-1|AAH66322.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 151 bits (366), Expect = 3e-36
Identities = 70/78 (89%), Positives = 76/78 (97%)
Frame = +1
Query: 364 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKS 543
I+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHRLARYYKTK
Sbjct: 74 ILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKR 133
Query: 544 VLPPNWKYESSTASALVA 597
VLPPNWKYESSTASALVA
Sbjct: 134 VLPPNWKYESSTASALVA 151
Score = 119 bits (287), Expect = 1e-26
Identities = 56/60 (93%), Positives = 58/60 (96%)
Frame = +3
Query: 183 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 362
SALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGVAQVRFVTG KILR
Sbjct: 14 SALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILR 73
Score = 32.7 bits (71), Expect = 1.8
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +2
Query: 143 MGRMHAPGKGISQXGAALP 199
MGRMHAPGKG+SQ +ALP
Sbjct: 1 MGRMHAPGKGLSQ--SALP 17
>BC029732-1|AAH29732.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 151 bits (366), Expect = 3e-36
Identities = 70/78 (89%), Positives = 76/78 (97%)
Frame = +1
Query: 364 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKS 543
I+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHRLARYYKTK
Sbjct: 74 ILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKR 133
Query: 544 VLPPNWKYESSTASALVA 597
VLPPNWKYESSTASALVA
Sbjct: 134 VLPPNWKYESSTASALVA 151
Score = 119 bits (287), Expect = 1e-26
Identities = 56/60 (93%), Positives = 58/60 (96%)
Frame = +3
Query: 183 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 362
SALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGVAQVRFVTG KILR
Sbjct: 14 SALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILR 73
Score = 32.7 bits (71), Expect = 1.8
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +2
Query: 143 MGRMHAPGKGISQXGAALP 199
MGRMHAPGKG+SQ +ALP
Sbjct: 1 MGRMHAPGKGLSQ--SALP 17
>BC006772-1|AAH06772.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 151 bits (366), Expect = 3e-36
Identities = 70/78 (89%), Positives = 76/78 (97%)
Frame = +1
Query: 364 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKS 543
I+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHRLARYYKTK
Sbjct: 74 ILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKR 133
Query: 544 VLPPNWKYESSTASALVA 597
VLPPNWKYESSTASALVA
Sbjct: 134 VLPPNWKYESSTASALVA 151
Score = 119 bits (287), Expect = 1e-26
Identities = 56/60 (93%), Positives = 58/60 (96%)
Frame = +3
Query: 183 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 362
SALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGVAQVRFVTG KILR
Sbjct: 14 SALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILR 73
Score = 32.7 bits (71), Expect = 1.8
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +2
Query: 143 MGRMHAPGKGISQXGAALP 199
MGRMHAPGKG+SQ +ALP
Sbjct: 1 MGRMHAPGKGLSQ--SALP 17
>BC000475-1|AAH00475.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 151 bits (366), Expect = 3e-36
Identities = 70/78 (89%), Positives = 76/78 (97%)
Frame = +1
Query: 364 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKS 543
I+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHRLARYYKTK
Sbjct: 74 ILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKR 133
Query: 544 VLPPNWKYESSTASALVA 597
VLPPNWKYESSTASALVA
Sbjct: 134 VLPPNWKYESSTASALVA 151
Score = 119 bits (287), Expect = 1e-26
Identities = 56/60 (93%), Positives = 58/60 (96%)
Frame = +3
Query: 183 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 362
SALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGVAQVRFVTG KILR
Sbjct: 14 SALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILR 73
Score = 32.7 bits (71), Expect = 1.8
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +2
Query: 143 MGRMHAPGKGISQXGAALP 199
MGRMHAPGKG+SQ +ALP
Sbjct: 1 MGRMHAPGKGLSQ--SALP 17
>L05090-1|AAC15854.1| 116|Homo sapiens ribosomal protein S13
protein.
Length = 116
Score = 119 bits (287), Expect = 1e-26
Identities = 56/60 (93%), Positives = 58/60 (96%)
Frame = +3
Query: 183 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 362
SALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGVAQVRFVTG KILR
Sbjct: 3 SALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILR 62
Score = 99.5 bits (237), Expect = 1e-20
Identities = 46/54 (85%), Positives = 52/54 (96%)
Frame = +1
Query: 364 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLAR 525
I+K+ GLA DLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHRLAR
Sbjct: 63 ILKSKGLASDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLAR 116
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,934,651
Number of Sequences: 237096
Number of extensions: 2007880
Number of successful extensions: 4276
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4276
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11437206932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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