Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_H06
         (691 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   2.3  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          24   3.9  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    24   3.9  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -2

Query: 576 PPPPXXXGPPP 544
           PPPP   GPPP
Sbjct: 585 PPPPPPMGPPP 595



 Score = 24.2 bits (50), Expect = 3.9
 Identities = 11/24 (45%), Positives = 11/24 (45%)
 Frame = -1

Query: 574 PPPXXXXPPPPKXXFXPQXXGGGP 503
           PPP    PPPP     P    GGP
Sbjct: 581 PPPAP--PPPPPMGPPPSPLAGGP 602


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 11/29 (37%), Positives = 11/29 (37%)
 Frame = +2

Query: 545 GGGPXXXGGGGXXXXXXXXXXPPXXXXFP 631
           GGG    GGGG          PP    FP
Sbjct: 550 GGGGGGGGGGGVIGSGSTTRLPPLHQPFP 578


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 11/33 (33%), Positives = 13/33 (39%)
 Frame = -1

Query: 571 PPXXXXPPPPKXXFXPQXXGGGPQIFSPKXXPG 473
           PP    PP P     P+   G P +  P   PG
Sbjct: 711 PPQRKGPPGPPGFNGPKGDKGLPGLAGPAGIPG 743


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 540,389
Number of Sequences: 2352
Number of extensions: 9759
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69831885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)