Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP27_F_H06
(691 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y13247-1|CAA73697.1| 940|Homo sapiens FB19 protein protein. 31 5.1
BX248507-1|CAI18567.1| 940|Homo sapiens protein phosphatase 1, ... 31 5.1
BX119957-5|CAM25909.1| 940|Homo sapiens protein phosphatase 1 r... 31 5.1
BA000025-74|BAB63324.1| 940|Homo sapiens FB19 protein. 31 5.1
AL662825-9|CAI17838.1| 940|Homo sapiens protein phosphatase 1, ... 31 5.1
AL662800-9|CAI18160.1| 940|Homo sapiens protein phosphatase 1, ... 31 5.1
AJ544537-1|CAD67521.1| 940|Homo sapiens protein phospahatase nu... 31 5.1
AB202094-1|BAE78613.1| 940|Homo sapiens protein phosphatase 1, ... 31 5.1
AB103603-1|BAF31264.1| 940|Homo sapiens FB19 protein protein. 31 5.1
AB088097-1|BAC54929.1| 940|Homo sapiens protein phosphatase 1, ... 31 5.1
AB037732-1|BAA92549.1| 889|Homo sapiens KIAA1311 protein protein. 31 5.1
X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage f... 30 6.8
X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein. 30 6.8
BC005000-1|AAH05000.1| 478|Homo sapiens CPSF6 protein protein. 30 6.8
BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein. 30 6.8
AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and polyadenyl... 30 6.8
X85133-1|CAA59445.1| 948|Homo sapiens RB protein binding protei... 30 8.9
D87742-1|BAA13448.1| 1193|Homo sapiens KIAA0268 protein. 30 8.9
BC047116-1|AAH47116.2| 467|Homo sapiens MIA3 protein protein. 30 8.9
AY072922-1|AAL68925.1| 1625|Homo sapiens p53-associated cellular... 30 8.9
AL592148-11|CAI40473.1| 785|Homo sapiens C219-reactive peptide ... 30 8.9
AL592148-7|CAI40469.1| 1907|Homo sapiens C219-reactive peptide (... 30 8.9
AF352051-1|AAL05625.1| 1616|Homo sapiens proliferation potential... 30 8.9
AB112075-1|BAC77637.1| 1758|Homo sapiens retinoblastoma binding ... 30 8.9
AB112074-1|BAC77636.1| 1792|Homo sapiens retinoblastoma binding ... 30 8.9
>Y13247-1|CAA73697.1| 940|Homo sapiens FB19 protein protein.
Length = 940
Score = 30.7 bits (66), Expect = 5.1
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +3
Query: 474 PGXXLGEKIWGPPPKXWGXKXFXGGGGXXXXGG 572
PG +G ++ GPPP G F G G GG
Sbjct: 658 PGGPVGPRLLGPPPPPRGGDPFWDGPGDPMRGG 690
>BX248507-1|CAI18567.1| 940|Homo sapiens protein phosphatase 1,
regulatory subunit 10 protein.
Length = 940
Score = 30.7 bits (66), Expect = 5.1
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +3
Query: 474 PGXXLGEKIWGPPPKXWGXKXFXGGGGXXXXGG 572
PG +G ++ GPPP G F G G GG
Sbjct: 658 PGGPVGPRLLGPPPPPRGGDPFWDGPGDPMRGG 690
>BX119957-5|CAM25909.1| 940|Homo sapiens protein phosphatase 1
regulatory subunit 10 protein.
Length = 940
Score = 30.7 bits (66), Expect = 5.1
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +3
Query: 474 PGXXLGEKIWGPPPKXWGXKXFXGGGGXXXXGG 572
PG +G ++ GPPP G F G G GG
Sbjct: 658 PGGPVGPRLLGPPPPPRGGDPFWDGPGDPMRGG 690
>BA000025-74|BAB63324.1| 940|Homo sapiens FB19 protein.
Length = 940
Score = 30.7 bits (66), Expect = 5.1
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +3
Query: 474 PGXXLGEKIWGPPPKXWGXKXFXGGGGXXXXGG 572
PG +G ++ GPPP G F G G GG
Sbjct: 658 PGGPVGPRLLGPPPPPRGGDPFWDGPGDPMRGG 690
>AL662825-9|CAI17838.1| 940|Homo sapiens protein phosphatase 1,
regulatory subunit 10 protein.
Length = 940
Score = 30.7 bits (66), Expect = 5.1
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +3
Query: 474 PGXXLGEKIWGPPPKXWGXKXFXGGGGXXXXGG 572
PG +G ++ GPPP G F G G GG
Sbjct: 658 PGGPVGPRLLGPPPPPRGGDPFWDGPGDPMRGG 690
>AL662800-9|CAI18160.1| 940|Homo sapiens protein phosphatase 1,
regulatory subunit 10 protein.
Length = 940
Score = 30.7 bits (66), Expect = 5.1
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +3
Query: 474 PGXXLGEKIWGPPPKXWGXKXFXGGGGXXXXGG 572
PG +G ++ GPPP G F G G GG
Sbjct: 658 PGGPVGPRLLGPPPPPRGGDPFWDGPGDPMRGG 690
>AJ544537-1|CAD67521.1| 940|Homo sapiens protein phospahatase
nuclear targeting subunit protein.
Length = 940
Score = 30.7 bits (66), Expect = 5.1
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +3
Query: 474 PGXXLGEKIWGPPPKXWGXKXFXGGGGXXXXGG 572
PG +G ++ GPPP G F G G GG
Sbjct: 658 PGGPVGPRLLGPPPPPRGGDPFWDGPGDPMRGG 690
>AB202094-1|BAE78613.1| 940|Homo sapiens protein phosphatase 1,
regulatory subunit 10 protein.
Length = 940
Score = 30.7 bits (66), Expect = 5.1
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +3
Query: 474 PGXXLGEKIWGPPPKXWGXKXFXGGGGXXXXGG 572
PG +G ++ GPPP G F G G GG
Sbjct: 658 PGGPVGPRLLGPPPPPRGGDPFWDGPGDPMRGG 690
>AB103603-1|BAF31264.1| 940|Homo sapiens FB19 protein protein.
Length = 940
Score = 30.7 bits (66), Expect = 5.1
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +3
Query: 474 PGXXLGEKIWGPPPKXWGXKXFXGGGGXXXXGG 572
PG +G ++ GPPP G F G G GG
Sbjct: 658 PGGPVGPRLLGPPPPPRGGDPFWDGPGDPMRGG 690
>AB088097-1|BAC54929.1| 940|Homo sapiens protein phosphatase 1,
regulatory subunit 10 protein.
Length = 940
Score = 30.7 bits (66), Expect = 5.1
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +3
Query: 474 PGXXLGEKIWGPPPKXWGXKXFXGGGGXXXXGG 572
PG +G ++ GPPP G F G G GG
Sbjct: 658 PGGPVGPRLLGPPPPPRGGDPFWDGPGDPMRGG 690
>AB037732-1|BAA92549.1| 889|Homo sapiens KIAA1311 protein protein.
Length = 889
Score = 30.7 bits (66), Expect = 5.1
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -1
Query: 574 PPPXXXXPPPPKXXFXPQXXGGGPQIFSPKXXPGVKP 464
PPP PPPP P G GP P PG P
Sbjct: 147 PPPPGLPPPPPPGMLMPPMPGPGP---GPGPGPGPGP 180
>X67337-1|CAA47752.1| 551|Homo sapiens Human pre-mRNA cleavage
factor I 68 kDa subunit protein.
Length = 551
Score = 30.3 bits (65), Expect = 6.8
Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 3/40 (7%)
Frame = -1
Query: 574 PPPXXXXPPPPKXXFXPQXXGG-GP--QIFSPKXXPGVKP 464
PPP PPPP F P+ G GP + P PG P
Sbjct: 309 PPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPP 348
>X67336-1|CAA47751.1| 551|Homo sapiens HPBRII-7 protein.
Length = 551
Score = 30.3 bits (65), Expect = 6.8
Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 3/40 (7%)
Frame = -1
Query: 574 PPPXXXXPPPPKXXFXPQXXGG-GP--QIFSPKXXPGVKP 464
PPP PPPP F P+ G GP + P PG P
Sbjct: 309 PPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPP 348
>BC005000-1|AAH05000.1| 478|Homo sapiens CPSF6 protein protein.
Length = 478
Score = 30.3 bits (65), Expect = 6.8
Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 3/40 (7%)
Frame = -1
Query: 574 PPPXXXXPPPPKXXFXPQXXGG-GP--QIFSPKXXPGVKP 464
PPP PPPP F P+ G GP + P PG P
Sbjct: 236 PPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPP 275
>BC000714-1|AAH00714.1| 588|Homo sapiens CPSF6 protein protein.
Length = 588
Score = 30.3 bits (65), Expect = 6.8
Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 3/40 (7%)
Frame = -1
Query: 574 PPPXXXXPPPPKXXFXPQXXGG-GP--QIFSPKXXPGVKP 464
PPP PPPP F P+ G GP + P PG P
Sbjct: 346 PPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPP 385
>AK223568-1|BAD97288.1| 551|Homo sapiens cleavage and
polyadenylation specific factor 6, 68 kD subunit variant
protein.
Length = 551
Score = 30.3 bits (65), Expect = 6.8
Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 3/40 (7%)
Frame = -1
Query: 574 PPPXXXXPPPPKXXFXPQXXGG-GP--QIFSPKXXPGVKP 464
PPP PPPP F P+ G GP + P PG P
Sbjct: 309 PPPPQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPP 348
>X85133-1|CAA59445.1| 948|Homo sapiens RB protein binding protein
protein.
Length = 948
Score = 29.9 bits (64), Expect = 8.9
Identities = 17/48 (35%), Positives = 19/48 (39%)
Frame = -1
Query: 571 PPXXXXPPPPKXXFXPQXXGGGPQIFSPKXXPGVKPKTXFXXFXKGPP 428
PP PPPP P G P FSP+ PG P + G P
Sbjct: 384 PPPPLYPPPPHTL--PLPPGVPPPQFSPQFPPGQPPPAGYSVPPPGFP 429
>D87742-1|BAA13448.1| 1193|Homo sapiens KIAA0268 protein.
Length = 1193
Score = 29.9 bits (64), Expect = 8.9
Identities = 16/49 (32%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Frame = -1
Query: 571 PPXXXXPPPPKXXFXPQXXGG-GPQIFSPKXXPGVKPKTXFXXFXKGPP 428
P PPP + PQ G GP+ P PG++P F G P
Sbjct: 1060 PMGGPVPPPIRYGPPPQLCGPFGPRPLPPPFGPGMRPPLGLREFAPGVP 1108
>BC047116-1|AAH47116.2| 467|Homo sapiens MIA3 protein protein.
Length = 467
Score = 29.9 bits (64), Expect = 8.9
Identities = 16/49 (32%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Frame = -1
Query: 571 PPXXXXPPPPKXXFXPQXXGG-GPQIFSPKXXPGVKPKTXFXXFXKGPP 428
P PPP + PQ G GP+ P PG++P F G P
Sbjct: 334 PMGGPVPPPIRYGPPPQLCGPFGPRPLPPPFGPGMRPPLGLREFAPGVP 382
>AY072922-1|AAL68925.1| 1625|Homo sapiens p53-associated cellular
protein PACT protein.
Length = 1625
Score = 29.9 bits (64), Expect = 8.9
Identities = 17/48 (35%), Positives = 19/48 (39%)
Frame = -1
Query: 571 PPXXXXPPPPKXXFXPQXXGGGPQIFSPKXXPGVKPKTXFXXFXKGPP 428
PP PPPP P G P FSP+ PG P + G P
Sbjct: 427 PPPPLYPPPPHTL--PLPPGVPPPQFSPQFPPGQPPPAGYSVPPPGFP 472
>AL592148-11|CAI40473.1| 785|Homo sapiens C219-reactive peptide
(FLJ39207) protein.
Length = 785
Score = 29.9 bits (64), Expect = 8.9
Identities = 16/49 (32%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Frame = -1
Query: 571 PPXXXXPPPPKXXFXPQXXGG-GPQIFSPKXXPGVKPKTXFXXFXKGPP 428
P PPP + PQ G GP+ P PG++P F G P
Sbjct: 652 PMGGPVPPPIRYGPPPQLCGPFGPRPLPPPFGPGMRPPLGLREFAPGVP 700
>AL592148-7|CAI40469.1| 1907|Homo sapiens C219-reactive peptide
(FLJ39207) protein.
Length = 1907
Score = 29.9 bits (64), Expect = 8.9
Identities = 16/49 (32%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Frame = -1
Query: 571 PPXXXXPPPPKXXFXPQXXGG-GPQIFSPKXXPGVKPKTXFXXFXKGPP 428
P PPP + PQ G GP+ P PG++P F G P
Sbjct: 1774 PMGGPVPPPIRYGPPPQLCGPFGPRPLPPPFGPGMRPPLGLREFAPGVP 1822
>AF352051-1|AAL05625.1| 1616|Homo sapiens proliferation
potential-related protein protein.
Length = 1616
Score = 29.9 bits (64), Expect = 8.9
Identities = 17/48 (35%), Positives = 19/48 (39%)
Frame = -1
Query: 571 PPXXXXPPPPKXXFXPQXXGGGPQIFSPKXXPGVKPKTXFXXFXKGPP 428
PP PPPP P G P FSP+ PG P + G P
Sbjct: 384 PPPPLYPPPPHTL--PLPPGVPPPQFSPQFPPGQPPPAGYSVPPPGFP 429
>AB112075-1|BAC77637.1| 1758|Homo sapiens retinoblastoma binding
protein 6 isoform 2 protein.
Length = 1758
Score = 29.9 bits (64), Expect = 8.9
Identities = 17/48 (35%), Positives = 19/48 (39%)
Frame = -1
Query: 571 PPXXXXPPPPKXXFXPQXXGGGPQIFSPKXXPGVKPKTXFXXFXKGPP 428
PP PPPP P G P FSP+ PG P + G P
Sbjct: 560 PPPPLYPPPPHTL--PLPPGVPPPQFSPQFPPGQPPPAGYSVPPPGFP 605
>AB112074-1|BAC77636.1| 1792|Homo sapiens retinoblastoma binding
protein 6 isoform 1 protein.
Length = 1792
Score = 29.9 bits (64), Expect = 8.9
Identities = 17/48 (35%), Positives = 19/48 (39%)
Frame = -1
Query: 571 PPXXXXPPPPKXXFXPQXXGGGPQIFSPKXXPGVKPKTXFXXFXKGPP 428
PP PPPP P G P FSP+ PG P + G P
Sbjct: 560 PPPPLYPPPPHTL--PLPPGVPPPQFSPQFPPGQPPPAGYSVPPPGFP 605
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,385,783
Number of Sequences: 237096
Number of extensions: 2183915
Number of successful extensions: 7032
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 3050
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6247
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7895240574
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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