Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_H06
         (691 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    25   0.90 
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    23   2.7  
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    21   8.4  

>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 24.6 bits (51), Expect = 0.90
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -3

Query: 134 RVFNTRVSKRKVSNVSLRTSLSSK 63
           R++N  VS  K  N   RT+ SSK
Sbjct: 269 RIYNAAVSTTKAINQGFRTTKSSK 292


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 16/62 (25%), Positives = 20/62 (32%), Gaps = 4/62 (6%)
 Frame = +2

Query: 224 AFPG*NRPAYXPD----HQXLYXNKXISFGXRXPIXXAL*KKPGXNSPRGPPKKPNXGEK 391
           A PG NRP Y P     H  L        G   P+     + P     R P  +P     
Sbjct: 96  AEPGNNRPVYIPQPRPPHPRLRREPEAEPGNNRPVYIPQPRPPHPRLRREPEAEPGNNRP 155

Query: 392 TF 397
            +
Sbjct: 156 VY 157



 Score = 21.4 bits (43), Expect = 8.4
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +2

Query: 176 MPEEMETQPAGXLKXFAFPG*NRPAYXP 259
           +P+     P    +  A PG NRP Y P
Sbjct: 106 IPQPRPPHPRLRREPEAEPGNNRPVYIP 133



 Score = 21.4 bits (43), Expect = 8.4
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +2

Query: 176 MPEEMETQPAGXLKXFAFPG*NRPAYXP 259
           +P+     P    +  A PG NRP Y P
Sbjct: 132 IPQPRPPHPRLRREPEAEPGNNRPVYIP 159


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 11/27 (40%), Positives = 12/27 (44%)
 Frame = +2

Query: 179 PEEMETQPAGXLKXFAFPG*NRPAYXP 259
           P    T+     K  A PG NRP Y P
Sbjct: 24  PPTRPTRLRREAKPEAEPGNNRPVYIP 50


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,285
Number of Sequences: 438
Number of extensions: 5060
Number of successful extensions: 24
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21073995
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)