Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP27_F_H03
(883 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46343-1|CAA86456.2| 356|Caenorhabditis elegans Hypothetical pr... 190 1e-48
U00051-14|AAM29692.1| 469|Caenorhabditis elegans Hypothetical p... 77 2e-14
U00051-13|AAA91358.1| 491|Caenorhabditis elegans Hypothetical p... 77 2e-14
Z73973-4|CAE54908.1| 367|Caenorhabditis elegans Hypothetical pr... 70 3e-12
Z73973-3|CAA98265.1| 468|Caenorhabditis elegans Hypothetical pr... 70 3e-12
Z81525-9|CAB04260.1| 242|Caenorhabditis elegans Hypothetical pr... 56 3e-08
AL031264-1|CAA20326.1| 242|Caenorhabditis elegans Hypothetical ... 56 3e-08
AC026301-13|AAP13737.1| 766|Caenorhabditis elegans Hypothetical... 48 9e-06
U29515-1|AAC06328.1| 449|Caenorhabditis elegans fem-2 protein. 36 0.038
U28412-8|AAC46598.1| 449|Caenorhabditis elegans Feminization of... 36 0.038
CU457741-2|CAM36343.1| 574|Caenorhabditis elegans Hypothetical ... 34 0.15
AC006834-5|AAF40007.1| 451|Caenorhabditis elegans Hypothetical ... 34 0.15
AF039052-10|AAF98634.1| 536|Caenorhabditis elegans Hypothetical... 33 0.27
Z83221-3|CAB05705.1| 498|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z75711-7|CAB00031.2| 380|Caenorhabditis elegans Hypothetical pr... 29 3.3
AF286377-1|AAG10298.1| 380|Caenorhabditis elegans POU family II... 29 3.3
AF068720-6|AAC17784.1| 541|Caenorhabditis elegans Hypothetical ... 29 3.3
Z93785-4|CAB07860.1| 330|Caenorhabditis elegans Hypothetical pr... 29 4.4
U52003-1|AAG00054.1| 503|Caenorhabditis elegans Hypothetical pr... 29 4.4
U52003-2|AAY43981.1| 554|Caenorhabditis elegans Hypothetical pr... 29 5.8
AF022980-4|AAG24191.1| 335|Caenorhabditis elegans Serpentine re... 29 5.8
>Z46343-1|CAA86456.2| 356|Caenorhabditis elegans Hypothetical
protein T23F11.1 protein.
Length = 356
Score = 190 bits (463), Expect = 1e-48
Identities = 83/145 (57%), Positives = 116/145 (80%)
Frame = +3
Query: 90 LGQTLSAPVPAQQSATCQASRFLVGSSCMQGWRVSMDXSHTHILSLPDDPGTAFFAVYDG 269
+GQTLS PV ++SA+C +LVGSSCMQGWRV M+ +HTH+LSLPDDP AFFAVYDG
Sbjct: 1 MGQTLSEPVTKKESASCANENYLVGSSCMQGWRVDMEDAHTHLLSLPDDPKCAFFAVYDG 60
Query: 270 HGGSNIAEHAGKHLHKYITARPEYHLGNIEEALKQGFLDLDRAMLEEDMLQEKVAGSTAV 449
HGGS +++++G +LHK + A+ E+ GN++EA+++GFL+LD+ M ++ ++ V+G+TAV
Sbjct: 61 HGGSKVSQYSGINLHKKVVAQKEFSEGNMKEAIEKGFLELDQQMRVDEETKDDVSGTTAV 120
Query: 450 VVLIKDNTLYCANVGDSRAVASVRG 524
VVLIK+ +YC N GDSRAV+SV G
Sbjct: 121 VVLIKEGDVYCGNAGDSRAVSSVVG 145
Score = 96.7 bits (230), Expect = 2e-20
Identities = 46/77 (59%), Positives = 54/77 (70%)
Frame = +1
Query: 523 GVVETLSYDHKPNNEEELRRIIAGGGWVQLNRVNGNLALSRALGDYVFKRNYRLSPQEQI 702
G LS+DHKP++E E RRIIA GGWV+ NRVNGNLALSRALGD+ FK +EQI
Sbjct: 145 GEARPLSFDHKPSHETEARRIIAAGGWVEFNRVNGNLALSRALGDFAFKNCDTKPAEEQI 204
Query: 703 VTAYPDVQVRHVNEDWE 753
VTA+PDV + D E
Sbjct: 205 VTAFPDVITDKLTPDHE 221
Score = 41.5 bits (93), Expect = 8e-04
Identities = 15/22 (68%), Positives = 20/22 (90%)
Frame = +3
Query: 756 IVIACDGIWEVLTNEEVISFCR 821
IV+ACDGIW+V+TN+EV+ F R
Sbjct: 223 IVLACDGIWDVMTNQEVVDFVR 244
>U00051-14|AAM29692.1| 469|Caenorhabditis elegans Hypothetical
protein F42G9.1b protein.
Length = 469
Score = 76.6 bits (180), Expect = 2e-14
Identities = 37/81 (45%), Positives = 50/81 (61%)
Frame = +1
Query: 511 LVSGGVVETLSYDHKPNNEEELRRIIAGGGWVQLNRVNGNLALSRALGDYVFKRNYRLSP 690
L G LS DHKP +E E RI A GG ++ RVNG L LSRA GD+ +K+N L
Sbjct: 319 LCRNGKAVDLSVDHKPEDEVETNRIHAAGGQIEDGRVNGGLNLSRAFGDHAYKKNQELGL 378
Query: 691 QEQIVTAYPDVQVRHVNEDWE 753
+EQ++TA PDV++ + + E
Sbjct: 379 KEQMITALPDVKIEALTPEDE 399
Score = 43.6 bits (98), Expect = 2e-04
Identities = 17/58 (29%), Positives = 33/58 (56%)
Frame = +3
Query: 252 FAVYDGHGGSNIAEHAGKHLHKYITARPEYHLGNIEEALKQGFLDLDRAMLEEDMLQE 425
F VYDGHGG+ +++ L ++ R + ++ E L++ F+D D + E+ ++E
Sbjct: 31 FGVYDGHGGTEVSKFTSAKLPDFLKERKFWEADDVAECLQKAFVDFDDFIRAEESMKE 88
Score = 33.1 bits (72), Expect = 0.27
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +3
Query: 756 IVIACDGIWEVLTNEEVISFCR 821
IV+ACDGIW + +++V+ F R
Sbjct: 401 IVVACDGIWNSMESQQVVDFVR 422
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +3
Query: 432 AGSTAVVVLIKDNTLYCANVGDSRAVASVRG 524
+G+TA V L+ + + AN GDSRAV G
Sbjct: 293 SGTTACVCLVGKDKVIVANAGDSRAVLCRNG 323
>U00051-13|AAA91358.1| 491|Caenorhabditis elegans Hypothetical
protein F42G9.1a protein.
Length = 491
Score = 76.6 bits (180), Expect = 2e-14
Identities = 37/81 (45%), Positives = 50/81 (61%)
Frame = +1
Query: 511 LVSGGVVETLSYDHKPNNEEELRRIIAGGGWVQLNRVNGNLALSRALGDYVFKRNYRLSP 690
L G LS DHKP +E E RI A GG ++ RVNG L LSRA GD+ +K+N L
Sbjct: 341 LCRNGKAVDLSVDHKPEDEVETNRIHAAGGQIEDGRVNGGLNLSRAFGDHAYKKNQELGL 400
Query: 691 QEQIVTAYPDVQVRHVNEDWE 753
+EQ++TA PDV++ + + E
Sbjct: 401 KEQMITALPDVKIEALTPEDE 421
Score = 62.1 bits (144), Expect = 5e-10
Identities = 29/112 (25%), Positives = 57/112 (50%)
Frame = +3
Query: 90 LGQTLSAPVPAQQSATCQASRFLVGSSCMQGWRVSMDXSHTHILSLPDDPGTAFFAVYDG 269
+G L+ P+ ++ + + MQGWRV+ + +H ++ L D F VYDG
Sbjct: 1 MGAYLNKPIIEKEKEEGSGNGLSYACTTMQGWRVNQEDAHNCVVDLHTD--WHMFGVYDG 58
Query: 270 HGGSNIAEHAGKHLHKYITARPEYHLGNIEEALKQGFLDLDRAMLEEDMLQE 425
HGG+ +++ L ++ R + ++ E L++ F+D D + E+ ++E
Sbjct: 59 HGGTEVSKFTSAKLPDFLKERKFWEADDVAECLQKAFVDFDDFIRAEESMKE 110
Score = 33.1 bits (72), Expect = 0.27
Identities = 11/22 (50%), Positives = 17/22 (77%)
Frame = +3
Query: 756 IVIACDGIWEVLTNEEVISFCR 821
IV+ACDGIW + +++V+ F R
Sbjct: 423 IVVACDGIWNSMESQQVVDFVR 444
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +3
Query: 432 AGSTAVVVLIKDNTLYCANVGDSRAVASVRG 524
+G+TA V L+ + + AN GDSRAV G
Sbjct: 315 SGTTACVCLVGKDKVIVANAGDSRAVLCRNG 345
>Z73973-4|CAE54908.1| 367|Caenorhabditis elegans Hypothetical
protein F25D1.1b protein.
Length = 367
Score = 69.7 bits (163), Expect = 3e-12
Identities = 42/107 (39%), Positives = 60/107 (56%)
Frame = +1
Query: 547 DHKPNNEEELRRIIAGGGWVQLNRVNGNLALSRALGDYVFKRNYRLSPQEQIVTAYPDVQ 726
DHKP E+E +RI GG V + R+NG+LA+SRA GDY +K + RL +Q+V+ PDV
Sbjct: 152 DHKPYLEKERKRIEGAGGSVMIQRINGSLAVSRAFGDYEYKDDPRLPADQQLVSPEPDVY 211
Query: 727 VRHVNEDWELSS*PVTVFGKFSLMRR*YLFVESIAERLGXGRGLRSV 867
+R N + + V G + +M L E + +RL LR V
Sbjct: 212 IRERNLENDQFM-VVACDGIYDVMTNEEL-AEFVKDRLSVHSDLREV 256
Score = 61.7 bits (143), Expect = 7e-10
Identities = 42/140 (30%), Positives = 66/140 (47%), Gaps = 20/140 (14%)
Frame = +3
Query: 156 LVGSSCMQGWRVSMDXSH-THILSLPDDP--GTAFFAVYDGHGGSNIAEHAGKHLHKYIT 326
+ G S MQGWR+ M+ SH + P +FFAV+DGH G +IA A L +++
Sbjct: 5 IYGMSSMQGWRICMEDSHIAEAIMSQSSPYKDWSFFAVFDGHAGHHIANRASSQLLEHLI 64
Query: 327 ARPEYH-----------------LGNIEEALKQGFLDLDRAMLEEDMLQEKVAGSTAVVV 455
+ E+ L +E+ +K+GFL D + + + +G TAV
Sbjct: 65 SSEEFREMTKTLEENNGVLTDSTLKLLEKGIKKGFLSFDEISKTSNDISK--SGCTAVCA 122
Query: 456 LIKDNTLYCANVGDSRAVAS 515
++ N+GDSRAV +
Sbjct: 123 IVTPTHFIIGNLGDSRAVVA 142
>Z73973-3|CAA98265.1| 468|Caenorhabditis elegans Hypothetical
protein F25D1.1a protein.
Length = 468
Score = 69.7 bits (163), Expect = 3e-12
Identities = 42/107 (39%), Positives = 60/107 (56%)
Frame = +1
Query: 547 DHKPNNEEELRRIIAGGGWVQLNRVNGNLALSRALGDYVFKRNYRLSPQEQIVTAYPDVQ 726
DHKP E+E +RI GG V + R+NG+LA+SRA GDY +K + RL +Q+V+ PDV
Sbjct: 253 DHKPYLEKERKRIEGAGGSVMIQRINGSLAVSRAFGDYEYKDDPRLPADQQLVSPEPDVY 312
Query: 727 VRHVNEDWELSS*PVTVFGKFSLMRR*YLFVESIAERLGXGRGLRSV 867
+R N + + V G + +M L E + +RL LR V
Sbjct: 313 IRERNLENDQFM-VVACDGIYDVMTNEEL-AEFVKDRLSVHSDLREV 357
Score = 62.9 bits (146), Expect = 3e-10
Identities = 45/162 (27%), Positives = 73/162 (45%), Gaps = 20/162 (12%)
Frame = +3
Query: 90 LGQTLSAPVPAQQSATCQASRFLVGSSCMQGWRVSMDXSH-THILSLPDDP--GTAFFAV 260
+G L P + + + + G S MQGWR+ M+ SH + P +FFAV
Sbjct: 84 MGAFLDKPKTDKTNVHGEGNGIRYGMSSMQGWRICMEDSHIAEAIMSQSSPYKDWSFFAV 143
Query: 261 YDGHGGSNIAEHAGKHLHKYITARPEYH-----------------LGNIEEALKQGFLDL 389
+DGH G +IA A L +++ + E+ L +E+ +K+GFL
Sbjct: 144 FDGHAGHHIANRASSQLLEHLISSEEFREMTKTLEENNGVLTDSTLKLLEKGIKKGFLSF 203
Query: 390 DRAMLEEDMLQEKVAGSTAVVVLIKDNTLYCANVGDSRAVAS 515
D + + + +G TAV ++ N+GDSRAV +
Sbjct: 204 DEISKTSNDISK--SGCTAVCAIVTPTHFIIGNLGDSRAVVA 243
>Z81525-9|CAB04260.1| 242|Caenorhabditis elegans Hypothetical
protein F33A8.6 protein.
Length = 242
Score = 56.0 bits (129), Expect = 3e-08
Identities = 43/136 (31%), Positives = 66/136 (48%), Gaps = 16/136 (11%)
Frame = +3
Query: 156 LVGSSCMQGWRVSMDXSHTHILSLPDDPGT--------AFFAVYDGHGGSNIAEHAGKHL 311
L C +G R M THI+ D GT +FFA++DGH G AEH +
Sbjct: 33 LAAYGCRKGERADMQD--THIMLPKFDLGTEKSFLSRASFFAIFDGHAGPRAAEHCQSQM 90
Query: 312 HKYITARPEYH--LGNIEEALKQGFLDLDRAMLEEDML---QEKVA---GSTAVVVLIKD 467
K + + + ++LKQ F + +A+ + + Q K G+TA ++I +
Sbjct: 91 GKTVKEKLAKFSDFPTLTKSLKQTFTESYKAVDDGFLAIAKQNKPIWKDGTTATTMIILN 150
Query: 468 NTLYCANVGDSRAVAS 515
N +Y AN+GDSRAV +
Sbjct: 151 NVIYVANIGDSRAVVA 166
Score = 39.1 bits (87), Expect = 0.004
Identities = 18/44 (40%), Positives = 27/44 (61%)
Frame = +1
Query: 538 LSYDHKPNNEEELRRIIAGGGWVQLNRVNGNLALSRALGDYVFK 669
L+ DH P + +E RI G V+ R+NG + +SR++GD FK
Sbjct: 179 LTVDHDPMSHDERMRIQKAGAVVKDGRINGVIEVSRSIGDLPFK 222
>AL031264-1|CAA20326.1| 242|Caenorhabditis elegans Hypothetical
protein F33A8.6 protein.
Length = 242
Score = 56.0 bits (129), Expect = 3e-08
Identities = 43/136 (31%), Positives = 66/136 (48%), Gaps = 16/136 (11%)
Frame = +3
Query: 156 LVGSSCMQGWRVSMDXSHTHILSLPDDPGT--------AFFAVYDGHGGSNIAEHAGKHL 311
L C +G R M THI+ D GT +FFA++DGH G AEH +
Sbjct: 33 LAAYGCRKGERADMQD--THIMLPKFDLGTEKSFLSRASFFAIFDGHAGPRAAEHCQSQM 90
Query: 312 HKYITARPEYH--LGNIEEALKQGFLDLDRAMLEEDML---QEKVA---GSTAVVVLIKD 467
K + + + ++LKQ F + +A+ + + Q K G+TA ++I +
Sbjct: 91 GKTVKEKLAKFSDFPTLTKSLKQTFTESYKAVDDGFLAIAKQNKPIWKDGTTATTMIILN 150
Query: 468 NTLYCANVGDSRAVAS 515
N +Y AN+GDSRAV +
Sbjct: 151 NVIYVANIGDSRAVVA 166
Score = 39.1 bits (87), Expect = 0.004
Identities = 18/44 (40%), Positives = 27/44 (61%)
Frame = +1
Query: 538 LSYDHKPNNEEELRRIIAGGGWVQLNRVNGNLALSRALGDYVFK 669
L+ DH P + +E RI G V+ R+NG + +SR++GD FK
Sbjct: 179 LTVDHDPMSHDERMRIQKAGAVVKDGRINGVIEVSRSIGDLPFK 222
>AC026301-13|AAP13737.1| 766|Caenorhabditis elegans Hypothetical
protein Y54F10BM.1 protein.
Length = 766
Score = 48.0 bits (109), Expect = 9e-06
Identities = 32/94 (34%), Positives = 49/94 (52%), Gaps = 10/94 (10%)
Frame = +3
Query: 249 FFAVYDGHGGSNIAEHAGKHLHKYITARPEYHLGNIE---EALKQGFL---DLDRAMLEE 410
F V+DGHGG + +E+ +HL IT ++ + E EA++QGFL + R + +E
Sbjct: 53 FVGVFDGHGGEHASEYVRRHLLMNITKNQKFESNSDEDILEAIRQGFLMTHEQMRHVYDE 112
Query: 411 ----DMLQEKVAGSTAVVVLIKDNTLYCANVGDS 500
AG+T V I++ LY +VGDS
Sbjct: 113 WPYTASGYPSTAGTTVSCVFIRNGKLYTGHVGDS 146
>U29515-1|AAC06328.1| 449|Caenorhabditis elegans fem-2 protein.
Length = 449
Score = 35.9 bits (79), Expect = 0.038
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Frame = +3
Query: 231 DDPGTAFFAVYDGHGGSNIAEHAGKHL-HKYITARPEYH-LGNIEEALKQGFLDLDRAML 404
+DP + AV+DGHGG +++A HL ++ R ++E+ L++ LD M
Sbjct: 192 EDP-ISVLAVFDGHGGHECSQYAAGHLWETWLEVRKSRDPSDSLEDQLRKSLELLDERMT 250
Query: 405 EEDMLQEKVAGSTAVVVLI-KDNTLYC-ANVGDS 500
+ + GSTAV I D L A +GDS
Sbjct: 251 VRSVKECWKGGSTAVCCAIDMDQKLMALAWLGDS 284
Score = 34.7 bits (76), Expect = 0.089
Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 4/44 (9%)
Frame = +1
Query: 538 LSYDHKPNNEEELRRIIAGGGWVQLN----RVNGNLALSRALGD 657
L+ H P++E E RR+ GG + + RVNG L L+RALGD
Sbjct: 297 LTRGHSPSDEREARRVEEAGGQLFVIGGELRVNGVLNLTRALGD 340
>U28412-8|AAC46598.1| 449|Caenorhabditis elegans Feminization of xx
and xo animalsprotein 2 protein.
Length = 449
Score = 35.9 bits (79), Expect = 0.038
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Frame = +3
Query: 231 DDPGTAFFAVYDGHGGSNIAEHAGKHL-HKYITARPEYH-LGNIEEALKQGFLDLDRAML 404
+DP + AV+DGHGG +++A HL ++ R ++E+ L++ LD M
Sbjct: 192 EDP-ISVLAVFDGHGGHECSQYAAGHLWETWLEVRKSRDPSDSLEDQLRKSLELLDERMT 250
Query: 405 EEDMLQEKVAGSTAVVVLI-KDNTLYC-ANVGDS 500
+ + GSTAV I D L A +GDS
Sbjct: 251 VRSVKECWKGGSTAVCCAIDMDQKLMALAWLGDS 284
Score = 34.7 bits (76), Expect = 0.089
Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 4/44 (9%)
Frame = +1
Query: 538 LSYDHKPNNEEELRRIIAGGGWVQLN----RVNGNLALSRALGD 657
L+ H P++E E RR+ GG + + RVNG L L+RALGD
Sbjct: 297 LTRGHSPSDEREARRVEEAGGQLFVIGGELRVNGVLNLTRALGD 340
>CU457741-2|CAM36343.1| 574|Caenorhabditis elegans Hypothetical
protein C42C1.2 protein.
Length = 574
Score = 33.9 bits (74), Expect = 0.15
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +3
Query: 246 AFFAVYDGHGGSNIAEHAGKHLHKYITAR 332
A F+++DGH GS +A A K LH+++ +R
Sbjct: 173 ALFSLFDGHAGSAVAVVASKCLHEHVKSR 201
Score = 30.3 bits (65), Expect = 1.9
Identities = 9/17 (52%), Positives = 16/17 (94%)
Frame = +3
Query: 753 VIVIACDGIWEVLTNEE 803
V+++A DG+W+VL+NE+
Sbjct: 473 VVIVASDGLWDVLSNED 489
>AC006834-5|AAF40007.1| 451|Caenorhabditis elegans Hypothetical
protein ZK973.3 protein.
Length = 451
Score = 33.9 bits (74), Expect = 0.15
Identities = 29/116 (25%), Positives = 47/116 (40%), Gaps = 15/116 (12%)
Frame = +3
Query: 216 ILSLPDDPGTAF-FAVYDGHGGSNIAEHAGKHL---HKYITARPEYHLGNIEEALKQGFL 383
++ P D + F+ DGH + +H+ HK + G + EALK F
Sbjct: 103 VVDYPSDQRLEWLFSSSDGHLPNAFKGRETQHIAEYHKQFKKNANAYTGTVREALKLAFE 162
Query: 384 DLDRAMLEEDMLQEK-----------VAGSTAVVVLIKDNTLYCANVGDSRAVASV 518
D+ + E + K +GS + I+ L+ AN+GD+ AV V
Sbjct: 163 TCDKDLAENALPSAKGVIDRHAAMVAASGSCCTLAHIRSRHLHVANLGDAAAVLGV 218
Score = 31.9 bits (69), Expect = 0.62
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +3
Query: 252 FAVYDGHGGSNIAEHAGKHLHKYITA 329
F V+DGHGG + H +L+ Y+ A
Sbjct: 70 FGVFDGHGGQQCSRHISTNLYPYLCA 95
>AF039052-10|AAF98634.1| 536|Caenorhabditis elegans Hypothetical
protein T22D1.1 protein.
Length = 536
Score = 33.1 bits (72), Expect = 0.27
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3
Query: 282 NIAEHAGKHLHKYITARPEYHLGNIEEALKQGFLDLD 392
++A G HLH YIT+ E + + E +QG+L LD
Sbjct: 185 HVANRFGGHLHMYITSMIESYFELMREYERQGYLTLD 221
>Z83221-3|CAB05705.1| 498|Caenorhabditis elegans Hypothetical
protein C49A1.5 protein.
Length = 498
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +3
Query: 282 NIAEHAGKHLHKYITARPEYHLGNIEEALKQGFLDLD 392
++A G HLH Y+T+ E + ++E +QG++ LD
Sbjct: 172 HVANRFGGHLHIYLTSIIESYFKLMKEYERQGYITLD 208
>Z75711-7|CAB00031.2| 380|Caenorhabditis elegans Hypothetical
protein K02B12.1 protein.
Length = 380
Score = 29.5 bits (63), Expect = 3.3
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = -1
Query: 580 YVAPLRCWACGHMTVS--PPHPLTLAT-ALESPTLAQYNVLSLISTTTAVLPATFSC 419
++ P WA H+ S PPH LT +T A+ + T+A S I T+V+ +T SC
Sbjct: 84 FMLPQHDWAYPHLAQSLPPPHHLTPSTAAVAAATIASQ---SSIINQTSVVTSTPSC 137
>AF286377-1|AAG10298.1| 380|Caenorhabditis elegans POU family III
homeodomain proteinCEH-6 protein.
Length = 380
Score = 29.5 bits (63), Expect = 3.3
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = -1
Query: 580 YVAPLRCWACGHMTVS--PPHPLTLAT-ALESPTLAQYNVLSLISTTTAVLPATFSC 419
++ P WA H+ S PPH LT +T A+ + T+A S I T+V+ +T SC
Sbjct: 84 FMLPQHDWAYPHLAQSLPPPHHLTPSTAAVAAATIASQ---SSIINQTSVVTSTPSC 137
>AF068720-6|AAC17784.1| 541|Caenorhabditis elegans Hypothetical
protein K02H11.4 protein.
Length = 541
Score = 29.5 bits (63), Expect = 3.3
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +3
Query: 279 SNIAEHAGKHLHKYITARPEYHLGNIEEALKQGFLDLD 392
++I+ + G HLH Y+T+ E + + E K G++ LD
Sbjct: 223 AHISHNFGGHLHLYVTSMLESYFDLVLEYEKLGYVTLD 260
>Z93785-4|CAB07860.1| 330|Caenorhabditis elegans Hypothetical
protein W09D10.4 protein.
Length = 330
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/38 (39%), Positives = 19/38 (50%)
Frame = +3
Query: 387 LDRAMLEEDMLQEKVAGSTAVVVLIKDNTLYCANVGDS 500
LD A V STA V+++ LY AN+GDS
Sbjct: 154 LDYAFRASAEAPRPVGSSTACVLVVHQEKLYSANLGDS 191
>U52003-1|AAG00054.1| 503|Caenorhabditis elegans Hypothetical
protein ZK381.2 protein.
Length = 503
Score = 29.1 bits (62), Expect = 4.4
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +3
Query: 288 AEHAGKHLHKYITARPEYHLGNIEEALKQGFLDLD 392
A G HLH Y+T+ E + ++E +QG++ LD
Sbjct: 181 ANRFGGHLHIYLTSIIESYFQLMQEYERQGYITLD 215
>U52003-2|AAY43981.1| 554|Caenorhabditis elegans Hypothetical
protein ZK381.8 protein.
Length = 554
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +3
Query: 282 NIAEHAGKHLHKYITARPEYHLGNIEEALKQGFLDLD 392
++A G HLH Y+T+ + ++E +QG++ LD
Sbjct: 231 HVANRFGGHLHIYLTSIIDSFFNLMKEYERQGYITLD 267
>AF022980-4|AAG24191.1| 335|Caenorhabditis elegans Serpentine
receptor, class j protein50 protein.
Length = 335
Score = 28.7 bits (61), Expect = 5.8
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 193 PWMXHTHIYCHYLMIRALHFLQST 264
P HT+ YC YLMI+ F++ST
Sbjct: 62 PMDIHTYRYCFYLMIKDGWFVEST 85
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,557,844
Number of Sequences: 27780
Number of extensions: 417788
Number of successful extensions: 1155
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1062
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1145
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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