Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP27_F_G24
(990 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1136 + 24218601-24218734,24218769-24219906 34 0.15
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 33 0.47
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863... 33 0.47
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 32 0.61
03_06_0758 - 36052261-36052301,36052463-36052697,36052895-360529... 27 0.84
02_05_0686 - 30900748-30902167,30903442-30904742 31 1.1
01_03_0005 + 11568545-11569119,11569179-11569191 31 1.9
01_01_0715 - 5542648-5543219,5543352-5543544 31 1.9
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 34.3 bits (75), Expect = 0.15
Identities = 20/53 (37%), Positives = 20/53 (37%), Gaps = 3/53 (5%)
Frame = -3
Query: 898 PPXFGGGTXXXPPXGGGGXXGXXQXXXQXGXGG---XMXPPXTGRRGPXXXXP 749
PP GGG PP GGG G G GG PP GR G P
Sbjct: 121 PPGAGGGGGARPPAPGGGGGGGAPRRVLGGGGGGGALARPPGGGRGGALGRPP 173
Score = 30.3 bits (65), Expect = 2.5
Identities = 18/44 (40%), Positives = 18/44 (40%)
Frame = -3
Query: 898 PPXFGGGTXXXPPXGGGGXXGXXQXXXQXGXGGXMXPPXTGRRG 767
P GGG PP GGGG G G GG PP G G
Sbjct: 98 PGPLGGG-GARPPGGGGG-GGPPSLPPGAGGGGGARPPAPGGGG 139
Score = 30.3 bits (65), Expect = 2.5
Identities = 15/34 (44%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = -3
Query: 898 PPXFG-GGTXXXPPXGGGGXXGXXQXXXQXGXGG 800
PP G GG PP GGGG G + G GG
Sbjct: 160 PPGGGRGGALGRPPGGGGGGGGPGRAPGGGGGGG 193
Score = 29.1 bits (62), Expect = 5.7
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = -2
Query: 899 SPGXWGGNPXXPPXGGGGXXGXXTXXXTXGXGG 801
+PG GG PP GGGG G GG
Sbjct: 97 APGPLGGGGARPPGGGGGGGPPSLPPGAGGGGG 129
Score = 28.7 bits (61), Expect = 7.6
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = -2
Query: 893 GXWGGNPXXPPXGGGGXXGXXTXXXTXGXGG 801
G GG P P GGGG G G GG
Sbjct: 176 GGGGGGPGRAPGGGGGGGGPGRAPGGGGGGG 206
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 32.7 bits (71), Expect = 0.47
Identities = 18/45 (40%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = +3
Query: 768 PLLPVXGGX-IXPPXPXCXXXCXXPXXPPPPXGGXXXVPPPXXGG 899
PL P G + PP P P PPPP G PPP GG
Sbjct: 1087 PLPPTLGDYGVAPPPPSIGAGAPPP--PPPPGGITGVPPPPPIGG 1129
Score = 32.7 bits (71), Expect = 0.47
Identities = 17/44 (38%), Positives = 18/44 (40%)
Frame = +3
Query: 768 PLLPVXGGXIXPPXPXCXXXCXXPXXPPPPXGGXXXVPPPXXGG 899
P LP G + PP P P PPPP G PPP G
Sbjct: 1139 PPLPEGIGGVPPPPPV--GGLGGPPAPPPPAGFRGGTPPPNAHG 1180
Score = 31.1 bits (67), Expect = 1.4
Identities = 17/40 (42%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Frame = +1
Query: 805 PXPXVXXXVXXPXXPPPPXG-GXXGFPPQXPGXXRPXXXP 921
P P V P PPPP G G G PP PG P P
Sbjct: 1174 PPPNAHGGVAPP--PPPPRGHGGVGGPPTPPGAPAPPMPP 1211
Score = 28.7 bits (61), Expect = 7.6
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = +1
Query: 787 GATXXPPXPXVXXXVXXPXXPPPPXGGXXGFPP 885
G PP P V + P PPPP G G PP
Sbjct: 1144 GIGGVPPPPPV-GGLGGPPAPPPPAGFRGGTPP 1175
>03_02_0455 -
8630543-8630893,8630994-8631068,8631149-8631223,
8631332-8631397,8631891-8631967,8632659-8633070
Length = 351
Score = 32.7 bits (71), Expect = 0.47
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +3
Query: 768 PLLPVXGGXIXPPXPXCXXXCXXPXXPPPPXGGXXXVPPP 887
P +P PP P P PPPP GG PPP
Sbjct: 270 PQVPPPPPQAPPPPPPNAPMGMPPRIPPPPVGGTQPPPPP 309
Score = 29.5 bits (63), Expect = 4.3
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +1
Query: 802 PPXPXVXXXVXXPXXPPPPXGGXXGFPPQXP 894
PP P P PPPP GG PP P
Sbjct: 281 PPPPPNAPMGMPPRIPPPPVGGTQPPPPPPP 311
Score = 28.7 bits (61), Expect = 7.6
Identities = 14/43 (32%), Positives = 15/43 (34%)
Frame = +1
Query: 766 GPFSRXXGATXXPPXPXVXXXVXXPXXPPPPXGGXXGFPPQXP 894
G G PP P V PPPP G PP+ P
Sbjct: 255 GTLPNGSGGPPRPPPPQVPPP-PPQAPPPPPPNAPMGMPPRIP 296
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 32.3 bits (70), Expect = 0.61
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +3
Query: 801 PPXPXCXXXCXXPXXPPPPXGGXXXVPPP 887
PP P C P PPPP VPPP
Sbjct: 592 PPLPNCLVPSPPPPPPPPPILPNRSVPPP 620
Score = 28.7 bits (61), Expect = 7.6
Identities = 15/42 (35%), Positives = 15/42 (35%), Gaps = 1/42 (2%)
Frame = +1
Query: 805 PXPXVXXXVXXPXXPPPPXGGXXGF-PPQXPGXXRPXXXPFS 927
P P P PPPP G F PP P P P S
Sbjct: 537 PSPTAAAPPPPPPPPPPPSGNKPAFSPPPPPPPPPPPPLPQS 578
>03_06_0758 -
36052261-36052301,36052463-36052697,36052895-36052966,
36056477-36056567,36056650-36056872,36056964-36057300,
36057406-36057588
Length = 393
Score = 27.5 bits (58), Expect(2) = 0.84
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = +1
Query: 766 GPFSRXXGATXXPPXPXVXXXVXXPXXPPPP 858
GP+ R GAT PP P V P PPP
Sbjct: 133 GPYVR--GATAPPPPPPPPMAVAPPPFLPPP 161
Score = 23.0 bits (47), Expect(2) = 0.84
Identities = 9/26 (34%), Positives = 10/26 (38%)
Frame = +1
Query: 847 PPPPXGGXXGFPPQXPGXXRPXXXPF 924
PPPP PP P P P+
Sbjct: 190 PPPPPEALRPLPPFPPTMLAPPAYPY 215
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 31.5 bits (68), Expect = 1.1
Identities = 18/43 (41%), Positives = 18/43 (41%), Gaps = 3/43 (6%)
Frame = +1
Query: 802 PPXPXVXXXVXXPXXPPPPXGGXXGFPPQXP---GXXRPXXXP 921
PP P P PPPP GG G PP P G RP P
Sbjct: 353 PPPPPPPKGPSPP--PPPPPGGKKGGPPPPPPKGGASRPPAAP 393
Score = 29.1 bits (62), Expect = 5.7
Identities = 13/40 (32%), Positives = 14/40 (35%)
Frame = +1
Query: 802 PPXPXVXXXVXXPXXPPPPXGGXXGFPPQXPGXXRPXXXP 921
PP P P PPPP PP+ P P P
Sbjct: 314 PPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGP 353
Score = 29.1 bits (62), Expect = 5.7
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +3
Query: 768 PLLPVXGGXIXPPXPXCXXXCXXPXXPPPPXGGXXXVPPPXXGG 899
P P PP P P PPPP PPP G
Sbjct: 318 PPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKG 361
Score = 29.1 bits (62), Expect = 5.7
Identities = 17/50 (34%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Frame = -1
Query: 789 PXXPGEGAPXXXXPXCPAGXAGFFLXGXKTXPXPPPXXGGXXK-KGRPGV 643
P P +G P P P+ G K P PPP GG + PGV
Sbjct: 346 PPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGGASRPPAAPGV 395
>01_03_0005 + 11568545-11569119,11569179-11569191
Length = 195
Score = 30.7 bits (66), Expect = 1.9
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -3
Query: 886 GGGTXXXPPXGGGGXXGXXQXXXQXGXGGXMXPP 785
GGG PP GGGG G G G PP
Sbjct: 108 GGGIYYPPPTGGGGGGGGGWQQGGGGGGAYPTPP 141
>01_01_0715 - 5542648-5543219,5543352-5543544
Length = 254
Score = 30.7 bits (66), Expect = 1.9
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +3
Query: 801 PPXPXCXXXCXXPXXPPPPXGGXXXVPPPXXG 896
PP P P PPPP GG P P G
Sbjct: 177 PPVPAPAPAGSPPPPPPPPAGGNFTAPSPAGG 208
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,630,551
Number of Sequences: 37544
Number of extensions: 338179
Number of successful extensions: 2143
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 916
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1764
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2893540780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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