Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_G19
         (940 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_28916| Best HMM Match : No HMM Matches (HMM E-Value=.)              83   3e-16
SB_25657| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0)              78   1e-14
SB_55143| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0)              66   3e-11
SB_48525| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0)              59   6e-09
SB_38742| Best HMM Match : No HMM Matches (HMM E-Value=.)              56   4e-08
SB_24154| Best HMM Match : Glyco_hydro_18 (HMM E-Value=2.2e-32)        39   0.005
SB_58420| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   3.1  
SB_54874| Best HMM Match : Toxin_28 (HMM E-Value=1.3)                  29   4.1  
SB_27940| Best HMM Match : IncA (HMM E-Value=0.41)                     29   7.2  
SB_15804| Best HMM Match : Toxin_28 (HMM E-Value=8.6)                  29   7.2  
SB_11550| Best HMM Match : No HMM Matches (HMM E-Value=.)              29   7.2  
SB_28600| Best HMM Match : EGF_CA (HMM E-Value=4.2e-40)                28   9.5  
SB_39447| Best HMM Match : No HMM Matches (HMM E-Value=.)              28   9.5  

>SB_28916| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 807

 Score = 83.0 bits (196), Expect = 3e-16
 Identities = 50/127 (39%), Positives = 71/127 (55%), Gaps = 1/127 (0%)
 Frame = +1

Query: 172 TNSRSYVRESQARMLPLDLDPALSFCTHLLYGYAGIQPDTYKLVSLNENLDIDRTHDNYR 351
           TN   Y R    + LP D+DP L  CTH++Y +A I P T K+ +   N   DR    Y+
Sbjct: 405 TNWAQY-RPDPVKFLPKDIDPLL--CTHIVYAFAKIDPATNKIGTYEWN--DDRL---YK 456

Query: 352 AITSLKAKYPGLTVLLSVGGDADTEEP-EKYNLLLESQQARTAFINSGVLLAEQYGFDGI 528
            I  LK K P L  LL+VGG      P   ++ ++ S+  RT FI+S + L+++Y FDG 
Sbjct: 457 EINDLKLKNPSLKTLLAVGGWNHESGPVSPFSQMVASKSNRTTFISSLLQLSDKYDFDGF 516

Query: 529 DLAWQFP 549
           DL W++P
Sbjct: 517 DLDWEYP 523


>SB_25657| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0)
          Length = 829

 Score = 77.8 bits (183), Expect = 1e-14
 Identities = 46/151 (30%), Positives = 77/151 (50%), Gaps = 3/151 (1%)
 Frame = +1

Query: 172 TNSRSYVRESQARMLPLDLDPALSFCTHLLYGYAGIQPDTYKLVSLNENLDIDRTHDNYR 351
           TN   Y R       P D+DP L  CTH+L+ +A +   T+KL    EN      H+ Y+
Sbjct: 28  TNWSQY-RPKGGTFWPEDIDPFL--CTHILFSFAKVNQTTHKLDIYEEN-----DHELYQ 79

Query: 352 AITSLKAKYPGLTVLLSVGGDADTEEPEKYNLLLESQQARTAFINSGVLLAEQYGFDGID 531
            I +LK   P L   ++VGG    E+   ++ ++ +++ R  FI S +     +GFDG+D
Sbjct: 80  RINALKKINPKLKTQIAVGGWTHEEKNSPFSKMVATKEKRAIFIKSAIETLRTHGFDGLD 139

Query: 532 LAWQFPRVK---PKKIRSTWGSLWHGIKKTF 615
           L W++P ++   PK  +  +  L   +++ F
Sbjct: 140 LDWEYPGMRGGSPKSDKGRFTLLCRELREAF 170



 Score = 66.1 bits (154), Expect = 4e-11
 Identities = 39/138 (28%), Positives = 68/138 (49%)
 Frame = +1

Query: 172 TNSRSYVRESQARMLPLDLDPALSFCTHLLYGYAGIQPDTYKLVSLNENLDIDRTHDNYR 351
           TN   Y R       P D+DP L  CTH+++ ++ +   T+ +    +N       D Y+
Sbjct: 413 TNWSQY-RPKGGTFWPEDIDPHL--CTHVIHSFSKVNLTTHVMEKYEKN-----DFDLYK 464

Query: 352 AITSLKAKYPGLTVLLSVGGDADTEEPEKYNLLLESQQARTAFINSGVLLAEQYGFDGID 531
            I +LK   P L   ++VGG    E+   ++ ++ +++ R  FI S +      GFDG+D
Sbjct: 465 RINALKKINPKLKTQIAVGGWTHEEKNSPFSKMVATKEKRAIFIKSAIETLRTNGFDGLD 524

Query: 532 LAWQFPRVKPKKIRSTWG 585
           L W++P ++    +S  G
Sbjct: 525 LDWEYPGMRGGSPKSDKG 542


>SB_55143| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0)
          Length = 270

 Score = 66.5 bits (155), Expect = 3e-11
 Identities = 42/130 (32%), Positives = 69/130 (53%), Gaps = 1/130 (0%)
 Frame = +1

Query: 172 TNSRSYVRESQARMLPLDLDPALSFCTHLLYGYAGI-QPDTYKLVSLNENLDIDRTHDNY 348
           TN   Y R+ +A+  P D+ PA   CTHL+Y +A I Q +   +   N+    D+ +  +
Sbjct: 26  TNWSQY-RQGRAKFWPEDI-PA-DLCTHLMYSFAKINQKNELAMYEWND----DKLYPRF 78

Query: 349 RAITSLKAKYPGLTVLLSVGGDADTEEPEKYNLLLESQQARTAFINSGVLLAEQYGFDGI 528
            A   LK K P L  LL+VGG         ++ ++++   R  FI+S + +   +GFDG+
Sbjct: 79  NA---LKQKNPELKTLLAVGGWNHENANSPFSRMVKTAATRKVFIDSVIRILRTWGFDGL 135

Query: 529 DLAWQFPRVK 558
           DL W++P  +
Sbjct: 136 DLDWEYPATR 145


>SB_48525| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0)
          Length = 569

 Score = 58.8 bits (136), Expect = 6e-09
 Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 2/106 (1%)
 Frame = +1

Query: 238 LSFCTHLLYGYAGIQPDTYKLVSLNENLDIDRTHDN--YRAITSLKAKYPGLTVLLSVGG 411
           +   T LL G+A     +  +      L +   +D+  Y+    LK K PGL  LL+VGG
Sbjct: 149 MQLLTLLLLGFASFAAASNYVHRCRHTLAMFEWNDDKLYKEFNDLKLKNPGLKTLLAVGG 208

Query: 412 DADTEEPEKYNLLLESQQARTAFINSGVLLAEQYGFDGIDLAWQFP 549
                    ++ ++ +  +R  FI+S + +  Q+ FDG DL W++P
Sbjct: 209 WNHENYKSPFSRMVRTAASRKVFIDSSIAMLRQWNFDGFDLDWEYP 254


>SB_38742| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 438

 Score = 56.0 bits (129), Expect = 4e-08
 Identities = 35/115 (30%), Positives = 58/115 (50%)
 Frame = +1

Query: 205 ARMLPLDLDPALSFCTHLLYGYAGIQPDTYKLVSLNENLDIDRTHDNYRAITSLKAKYPG 384
           A+  P ++DP+L  CTH++Y +A +  D  KL     N   D     Y+ +  LK+    
Sbjct: 38  AKYTPDNIDPSL--CTHIVYAFAKMNADNSKLAMFEWN---DAAM--YKKVNDLKSS-SN 89

Query: 385 LTVLLSVGGDADTEEPEKYNLLLESQQARTAFINSGVLLAEQYGFDGIDLAWQFP 549
           +  LL+VGG      P  +  ++ +   R  FI+  +L    + FDG+DL W++P
Sbjct: 90  MKTLLAVGGWNMGSGP--FQDMVSTASRRKIFIDDAILFLRNHMFDGLDLDWEYP 142


>SB_24154| Best HMM Match : Glyco_hydro_18 (HMM E-Value=2.2e-32)
          Length = 561

 Score = 39.1 bits (87), Expect = 0.005
 Identities = 20/68 (29%), Positives = 35/68 (51%)
 Frame = +1

Query: 346 YRAITSLKAKYPGLTVLLSVGGDADTEEPEKYNLLLESQQARTAFINSGVLLAEQYGFDG 525
           Y+ +  LK+    +  LL+VGG      P  +  ++ +   R  FI+  +L    + FDG
Sbjct: 2   YKKVNDLKSS-SNMKTLLAVGGWNMGSGP--FQDMVSTASRRKIFIDDAILFLRNHMFDG 58

Query: 526 IDLAWQFP 549
           +DL W++P
Sbjct: 59  LDLDWEYP 66


>SB_58420| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 679

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = -1

Query: 343 CRVFGLCPGSRLRTPAYRCQAGYRHSRTASGCRTTERDRGPTAAC 209
           CR+FG    + L    YR Q  Y+H+R    C T E+ R     C
Sbjct: 483 CRLFGAIFDNSLGKTRYRSQ--YKHTRRRHPCSTCEQYRSRNRNC 525


>SB_54874| Best HMM Match : Toxin_28 (HMM E-Value=1.3)
          Length = 506

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
 Frame = -3

Query: 524 PSKPYCSANSTPELMKAVRACC--DSSRRLYFSGSSVSASPPTDN 396
           P  P C A S+ E + ++R     D  RR+ F G  V   PP  N
Sbjct: 384 PDIPICVAASSSEFVSSIRIWIRDDRGRRVDFKGKPVRLCPPPAN 428


>SB_27940| Best HMM Match : IncA (HMM E-Value=0.41)
          Length = 418

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
 Frame = -3

Query: 524 PSKPYCSANSTPELMKAVRACC--DSSRRLYFSGSSVSASPPTDN 396
           P  P C A S  E + ++R     D  RR+ F G  V   PP  N
Sbjct: 183 PDIPICVAASPSEFVSSIRIWIRDDRGRRVDFKGKPVRLCPPPAN 227


>SB_15804| Best HMM Match : Toxin_28 (HMM E-Value=8.6)
          Length = 329

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
 Frame = -3

Query: 524 PSKPYCSANSTPELMKAVRACC--DSSRRLYFSGSSVSASPPTDN 396
           P  P C A S  E + ++R     D  RR+ F G  V   PP  N
Sbjct: 183 PDIPICVAASPSEFVSSIRIWIRDDRGRRVDFKGKPVRLCPPPAN 227


>SB_11550| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 418

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
 Frame = -3

Query: 524 PSKPYCSANSTPELMKAVRACC--DSSRRLYFSGSSVSASPPTDN 396
           P  P C A S  E + ++R     D  RR+ F G  V   PP  N
Sbjct: 183 PDIPICVAASPSEFVSSIRIWISDDRGRRVDFKGKPVRLCPPPAN 227


>SB_28600| Best HMM Match : EGF_CA (HMM E-Value=4.2e-40)
          Length = 1042

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
 Frame = +1

Query: 340 DNYRAITSLKAKYPGLT---VLLSVGGDADTEEPEKYNL 447
           DNY +   +   YP  T   V+LS  GDA T   +KY L
Sbjct: 112 DNYASCKLIPLTYPYYTPPVVILSANGDASTLPSDKYAL 150


>SB_39447| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 2123

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +2

Query: 134 PTCGNPQQSTLLLRTAGAMSENLKPACCRWTSIP 235
           PT   P+++ LLLR+   +   +K +  RW  +P
Sbjct: 350 PTYSEPRKTNLLLRSRNLIVAMMKMSSVRWKKLP 383


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,347,928
Number of Sequences: 59808
Number of extensions: 459608
Number of successful extensions: 1197
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1092
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1194
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2740956230
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)