Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_G16
         (914 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0214 - 1615519-1616775                                           33   0.32 
03_04_0055 + 16891212-16891848,16893166-16893206                       31   1.7  
08_02_0311 - 15635165-15635590,15635777-15638698                       30   2.2  
03_03_0094 + 14378953-14380728                                         29   6.8  
01_06_1275 - 35910992-35911342,35912157-35912390,35912573-359126...    29   6.8  
01_06_0848 + 32426550-32426613,32427013-32427167,32428470-324285...    29   6.8  
08_02_1147 - 24688686-24689729,24689875-24690036,24690339-246903...    28   9.0  

>05_01_0214 - 1615519-1616775
          Length = 418

 Score = 33.1 bits (72), Expect = 0.32
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = -3

Query: 279 DRGHLGDGHDEGRXHLPGXGHAGQEDLQRRHDDEQH 172
           D GH G GH  G  H     H G +     H+D++H
Sbjct: 183 DHGH-GHGHGHGHGHSHDHDHGGSDHDHHHHEDQEH 217


>03_04_0055 + 16891212-16891848,16893166-16893206
          Length = 225

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 15/46 (32%), Positives = 18/46 (39%)
 Frame = -3

Query: 303 PRHVEHQQDRGHLGDGHDEGRXHLPGXGHAGQEDLQRRHDDEQHDE 166
           P   + QQ   H+  G   G  H PG G  G        +DE  DE
Sbjct: 175 PPPQQQQQQHHHMAMGGRGGFGHHPGGGGGGSSSSSGHDEDEDEDE 220


>08_02_0311 - 15635165-15635590,15635777-15638698
          Length = 1115

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 13/41 (31%), Positives = 21/41 (51%)
 Frame = -3

Query: 291 EHQQDRGHLGDGHDEGRXHLPGXGHAGQEDLQRRHDDEQHD 169
           EH +   +  D   +G+ HLPG G  G + L  R+ + + D
Sbjct: 184 EHYKIGEYADDDPHDGKLHLPGPGGGGNKSLLARNQNGEFD 224


>03_03_0094 + 14378953-14380728
          Length = 591

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 20/84 (23%), Positives = 37/84 (44%)
 Frame = -1

Query: 665 IPEYLSTRRVMESEMMPSGDGQTMVKDWWCKXRNGFPQRLMLPLGTIGGLEMQMXVIVSP 486
           +   L  R + ES+++     + +   W       + + L + LG + G+   M  +   
Sbjct: 208 VKRQLRVRTIYESKLLEHDADRHLAVFWISCEAGTYVRTLCVHLGLLLGVGAHMQEL-RR 266

Query: 485 VRTGMLLPTLDMTMMKDRCACRWS 414
           VR+G+L  T +M  M D    RW+
Sbjct: 267 VRSGILGETDNMVTMHDVMDARWA 290


>01_06_1275 -
           35910992-35911342,35912157-35912390,35912573-35912653,
           35913162-35913407,35913502-35913617,35914813-35915032
          Length = 415

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +1

Query: 562 PLRXLHHQSLTIVWPSPEGIISLSITRRVERYSGIN 669
           P R LHH  L ++   PE +++    ++VE   G N
Sbjct: 61  PPRGLHHHCLGVLSQGPEDVVAEYYQQQVEMLEGFN 96


>01_06_0848 +
           32426550-32426613,32427013-32427167,32428470-32428526,
           32428877-32428930,32429349-32429418,32429951-32432034
          Length = 827

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 13/41 (31%), Positives = 18/41 (43%)
 Frame = +3

Query: 549 SLRESVAXLAPPVLDHCLAISGRHHFAFHYTTSRKVLWDKS 671
           S  +  + +   VLD    +   HH A  YT S + LW  S
Sbjct: 693 SAGDGASLIIKSVLDRATELLTDHHAAASYTVSNRTLWQAS 733


>08_02_1147 -
           24688686-24689729,24689875-24690036,24690339-24690368,
           24690713-24690860,24691302-24691489
          Length = 523

 Score = 28.3 bits (60), Expect = 9.0
 Identities = 14/48 (29%), Positives = 21/48 (43%)
 Frame = -3

Query: 309 KRPRHVEHQQDRGHLGDGHDEGRXHLPGXGHAGQEDLQRRHDDEQHDE 166
           K  RH   +       DG DE R  +    H  +E+ + RHD + H +
Sbjct: 202 KSKRHHSSENSDSEESDGRDERRKSVQASEHK-REEKRSRHDKKDHGQ 248


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,563,153
Number of Sequences: 37544
Number of extensions: 436773
Number of successful extensions: 1084
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1046
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1083
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)