Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_G16
         (914 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132948-1|CAC51077.1|  735|Caenorhabditis elegans Hypothetical ...    31   0.87 
U58762-6|AAG01563.2|  208|Caenorhabditis elegans Hypothetical pr...    30   2.7  
U80451-7|AAB37841.3|  277|Caenorhabditis elegans Collagen protei...    29   6.1  
U18384-1|AAA62504.1|  293|Caenorhabditis elegans collagen protein.     29   6.1  
U23169-3|AAV58882.1|  284|Caenorhabditis elegans Regulator of g ...    28   8.1  
U23169-2|AAM98050.1|  290|Caenorhabditis elegans Regulator of g ...    28   8.1  
U23169-1|AAL02450.1|  363|Caenorhabditis elegans Regulator of g ...    28   8.1  
U13642-8|AAG00040.1|  428|Caenorhabditis elegans Similar to tran...    28   8.1  
U13642-7|AAZ32791.1|  446|Caenorhabditis elegans Similar to tran...    28   8.1  

>AL132948-1|CAC51077.1|  735|Caenorhabditis elegans Hypothetical
           protein Y39B6A.1 protein.
          Length = 735

 Score = 31.5 bits (68), Expect = 0.87
 Identities = 29/113 (25%), Positives = 35/113 (30%), Gaps = 8/113 (7%)
 Frame = -3

Query: 486 GPHRYAXAHIGHDHDEGPLCLSLELMYXHHAXRISI*QTD*HGELFH*QHEVX*RNDXQK 307
           G H +A AH GH    G         + HH+        + H    H  H     +    
Sbjct: 430 GEHHHAPAHHGHHESHG---------HGHHSPAHHGHHGEHHHAPAHHGHHGEHHHAPAH 480

Query: 306 RPRHVEHQQDRGHLGD-------GHDEGRXHLPG-XGHAGQEDLQRRHDDEQH 172
              H EH    GH G        GH     H P   GH G+      H  E H
Sbjct: 481 HGHHGEHGTHHGHHGSHHSPAHHGHHGEHHHAPAHHGHHGEHGTHHGHHGEHH 533



 Score = 30.7 bits (66), Expect = 1.5
 Identities = 30/122 (24%), Positives = 39/122 (31%)
 Frame = -3

Query: 552 ETYAAPRYDWRFGDADVXXRVAGPHRYAXAHIGHDHDEGPLCLSLELMYXHHAXRISI*Q 373
           E + AP +    G+        G H +A AH GH  + G         + HH    S   
Sbjct: 508 EHHHAPAHHGHHGEHGTHHGHHGEHHHAPAHHGHHGEHG-------THHGHHGSHHSPAH 560

Query: 372 TD*HGELFH*QHEVX*RNDXQKRPRHVEHQQDRGHLGDGHDEGRXHLPGXGHAGQEDLQR 193
              HGE  H                H  H +  GH   GH     H    GH G+  +  
Sbjct: 561 HGHHGEHHHAPAHHGHHGHHGSHGVHHGHHESHGH---GHHAPAHH----GHHGEHGVHH 613

Query: 192 RH 187
            H
Sbjct: 614 GH 615



 Score = 28.7 bits (61), Expect = 6.1
 Identities = 22/86 (25%), Positives = 26/86 (30%)
 Frame = +3

Query: 249 HHDHLRGVHGLAGVRHAEVFSVXHYVSXLHVASEKARHVNRSVKWISXRHGGXXXXXXXX 428
           HH H  G HG  GV H       H+ S  H     A H +     +   H G        
Sbjct: 573 HHGH-HGHHGSHGVHHG------HHESHGHGHHAPAHHGHHGEHGVHHGHHGAGYGAHHG 625

Query: 429 XXVLHHGHVQCGQXHTGADRRHDXXH 506
               HH H    + H      H   H
Sbjct: 626 HHGAHHHHAPHHEHHEHHGDHHHGSH 651



 Score = 28.3 bits (60), Expect = 8.1
 Identities = 13/50 (26%), Positives = 20/50 (40%)
 Frame = -3

Query: 321 NDXQKRPRHVEHQQDRGHLGDGHDEGRXHLPGXGHAGQEDLQRRHDDEQH 172
           ++ +  P H EH + +      H EG  H     H  +  +  RH  E H
Sbjct: 362 DEKKHAPAHHEHHEHKDGAHHEHKEGEHH-EHAAHHDEHGVHHRHHGEHH 410


>U58762-6|AAG01563.2|  208|Caenorhabditis elegans Hypothetical
           protein T27F7.1 protein.
          Length = 208

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = -1

Query: 707 KNTIVRSSMDMQGFIPEYLSTRRVMESEMMPSGDGQTMVKD 585
           K+T V  SM     +PE + T R M +EMM  G  + M+++
Sbjct: 104 KSTEVMKSMQQLVKVPEIMKTMREMSAEMMKLGIIEEMIEE 144


>U80451-7|AAB37841.3|  277|Caenorhabditis elegans Collagen protein
           17 protein.
          Length = 277

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 14/53 (26%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
 Frame = -3

Query: 318 DXQKRPRHVEHQ--QDRGHLGDGHDEGRXHLPGXGHAGQEDLQRRHDDEQHDE 166
           + Q+   H +HQ  QD+  L D  +      P   H G +D Q   + + H +
Sbjct: 122 EPQEPQDHKDHQEPQDKTELQDNQEPQDKSAPSQPHQGTQDSQESQEPKDHQD 174


>U18384-1|AAA62504.1|  293|Caenorhabditis elegans collagen protein.
          Length = 293

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 14/53 (26%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
 Frame = -3

Query: 318 DXQKRPRHVEHQ--QDRGHLGDGHDEGRXHLPGXGHAGQEDLQRRHDDEQHDE 166
           + Q+   H +HQ  QD+  L D  +      P   H G +D Q   + + H +
Sbjct: 122 EPQEPQDHKDHQEPQDKTELQDNQEPQDKSAPSQPHQGTQDSQESQEPKDHQD 174


>U23169-3|AAV58882.1|  284|Caenorhabditis elegans Regulator of g
           protein signalingprotein 3, isoform c protein.
          Length = 284

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = -1

Query: 707 KNTIVRSSMDMQGFIPEYLSTRRVMESEMMP 615
           +N +   ++DM+ F P     RR++E++  P
Sbjct: 104 RNAVASETLDMEEFAPAIKEVRRLLENDQFP 134


>U23169-2|AAM98050.1|  290|Caenorhabditis elegans Regulator of g
           protein signalingprotein 3, isoform b protein.
          Length = 290

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = -1

Query: 707 KNTIVRSSMDMQGFIPEYLSTRRVMESEMMP 615
           +N +   ++DM+ F P     RR++E++  P
Sbjct: 110 RNAVASETLDMEEFAPAIKEVRRLLENDQFP 140


>U23169-1|AAL02450.1|  363|Caenorhabditis elegans Regulator of g
           protein signalingprotein 3, isoform a protein.
          Length = 363

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = -1

Query: 707 KNTIVRSSMDMQGFIPEYLSTRRVMESEMMP 615
           +N +   ++DM+ F P     RR++E++  P
Sbjct: 183 RNAVASETLDMEEFAPAIKEVRRLLENDQFP 213


>U13642-8|AAG00040.1|  428|Caenorhabditis elegans Similar to
           transporter of divalentcations protein 1, isoform a
           protein.
          Length = 428

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 13/40 (32%), Positives = 16/40 (40%)
 Frame = -3

Query: 288 HQQDRGHLGDGHDEGRXHLPGXGHAGQEDLQRRHDDEQHD 169
           H    GH  D +D G  H  G    G +     HD  +HD
Sbjct: 357 HDNGHGHSHDHNDHGHSH--GHDDHGHDSHGHSHDHNEHD 394


>U13642-7|AAZ32791.1|  446|Caenorhabditis elegans Similar to
           transporter of divalentcations protein 1, isoform b
           protein.
          Length = 446

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 13/40 (32%), Positives = 16/40 (40%)
 Frame = -3

Query: 288 HQQDRGHLGDGHDEGRXHLPGXGHAGQEDLQRRHDDEQHD 169
           H    GH  D +D G  H  G    G +     HD  +HD
Sbjct: 375 HDNGHGHSHDHNDHGHSH--GHDDHGHDSHGHSHDHNEHD 412


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,352,773
Number of Sequences: 27780
Number of extensions: 346328
Number of successful extensions: 776
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 710
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 768
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)