Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_G09
         (870 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81520-3|CAB04222.1|  214|Caenorhabditis elegans Hypothetical pr...    31   1.4  
U58746-5|AAB00625.1|  310|Caenorhabditis elegans Hypothetical pr...    29   3.3  
AF068713-9|AAC17800.1|  284|Caenorhabditis elegans Serpentine re...    28   10.0 

>Z81520-3|CAB04222.1|  214|Caenorhabditis elegans Hypothetical
           protein F31B9.3 protein.
          Length = 214

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = +3

Query: 132 CVNAQVSMPPGYAEKYPITSQFSRVSPTPSRYSRLCHL 245
           CV+  V  P G  ++ P+     + +P PS Y+RLC++
Sbjct: 100 CVDMYVDFPDG--QRMPVDEFVKQYAPGPSFYNRLCNM 135


>U58746-5|AAB00625.1|  310|Caenorhabditis elegans Hypothetical
           protein R05G6.4 protein.
          Length = 310

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
 Frame = +3

Query: 48  FXHSCLEQRNLSQFKMYSKVLLSAALLVCV-NAQVSMPPGYAEKYPITSQFSRVSPTPSR 224
           F    + +  L+Q K Y+K L      V   +A   +  G AE +   +QFS +  TPSR
Sbjct: 65  FDREAILENILAQKKAYAKKLKEYEKQVAEESAAAKIAEGQAETFTKRTQFSAIESTPSR 124


>AF068713-9|AAC17800.1|  284|Caenorhabditis elegans Serpentine
           receptor, class bc (class b-like) protein 68 protein.
          Length = 284

 Score = 27.9 bits (59), Expect = 10.0
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = -3

Query: 109 NTLEYILNCDRFRCSRQE 56
           NT++  +NCD FRCS  E
Sbjct: 149 NTIDTPMNCDHFRCSFNE 166


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,064,465
Number of Sequences: 27780
Number of extensions: 231299
Number of successful extensions: 422
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 422
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)