Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP27_F_G08
(897 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S57284-1|AAB25906.1| 437|Caenorhabditis elegans S-adenosylhomoc... 266 2e-71
M64306-1|AAA28062.1| 437|Caenorhabditis elegans S-adenosylhomoc... 266 2e-71
AF043699-5|AAB97565.1| 437|Caenorhabditis elegans Hypothetical ... 266 2e-71
AC006659-2|AAF39883.2| 977|Caenorhabditis elegans Hypothetical ... 29 3.4
>S57284-1|AAB25906.1| 437|Caenorhabditis elegans
S-adenosylhomocysteine hydrolase protein.
Length = 437
Score = 266 bits (651), Expect = 2e-71
Identities = 132/233 (56%), Positives = 158/233 (67%), Gaps = 1/233 (0%)
Frame = +3
Query: 195 KPPYKIADEKLAEWGRKEIMLAEKEMPGLMACRRKYAPAKILKGARIAGSLHMTVQTAVL 374
KP YK+AD KLA++GRKEI+LAE EMPGLMA R KY P++ LKGARIAG LHMT+QTAVL
Sbjct: 5 KPAYKVADIKLADFGRKEIILAENEMPGLMAMRSKYGPSQPLKGARIAGCLHMTIQTAVL 64
Query: 375 IETLIELGAEVQWSSSNIYSTQDEAAAALVAVGIPIYAWKGETDDEYIWCIEQTLIFPDG 554
IETL LGAEVQWSS NI+STQD AAAA+ G+P+YAWKGETD+EY WCIEQT++F DG
Sbjct: 65 IETLTALGAEVQWSSCNIFSTQDHAAAAIAQTGVPVYAWKGETDEEYEWCIEQTIVFKDG 124
Query: 555 KPLNMILDDGGDLTNLVHTKYPDLLKDVKGIXXXXXXXXXXFV*NVPRRTFK-SSCNQRX 731
+PLNMILDDGGDLTNLVH KYP L ++G+ + + K + N
Sbjct: 125 QPLNMILDDGGDLTNLVHAKYPQYLAGIRGLSEETTTGVHNLAKMLAKGDLKVPAINVND 184
Query: 732 RXXXXXXXXXCMDVGSLCSTESXGTDIMIAGKVCVLAGYGDVGKDAPKRSKVW 890
SL TD+M+AGKV V+AGYGDVGK + K +
Sbjct: 185 SVTKSKFDNLYGIRESLPDGIKRATDVMLAGKVAVVAGYGDVGKGSAASLKAF 237
Score = 39.1 bits (87), Expect = 0.004
Identities = 19/28 (67%), Positives = 21/28 (75%)
Frame = +1
Query: 667 GVHNLYKMFREGLLKVPAINVXXSVXKA 750
GVHNL KM +G LKVPAINV SV K+
Sbjct: 162 GVHNLAKMLAKGDLKVPAINVNDSVTKS 189
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +2
Query: 749 QFXNLYGCRESLLDGIK 799
+F NLYG RESL DGIK
Sbjct: 190 KFDNLYGIRESLPDGIK 206
>M64306-1|AAA28062.1| 437|Caenorhabditis elegans
S-adenosylhomocysteine hydrolase protein.
Length = 437
Score = 266 bits (651), Expect = 2e-71
Identities = 132/233 (56%), Positives = 158/233 (67%), Gaps = 1/233 (0%)
Frame = +3
Query: 195 KPPYKIADEKLAEWGRKEIMLAEKEMPGLMACRRKYAPAKILKGARIAGSLHMTVQTAVL 374
KP YK+AD KLA++GRKEI+LAE EMPGLMA R KY P++ LKGARIAG LHMT+QTAVL
Sbjct: 5 KPAYKVADIKLADFGRKEIILAENEMPGLMAMRSKYGPSQPLKGARIAGCLHMTIQTAVL 64
Query: 375 IETLIELGAEVQWSSSNIYSTQDEAAAALVAVGIPIYAWKGETDDEYIWCIEQTLIFPDG 554
IETL LGAEVQWSS NI+STQD AAAA+ G+P+YAWKGETD+EY WCIEQT++F DG
Sbjct: 65 IETLTALGAEVQWSSCNIFSTQDHAAAAIAQTGVPVYAWKGETDEEYEWCIEQTIVFKDG 124
Query: 555 KPLNMILDDGGDLTNLVHTKYPDLLKDVKGIXXXXXXXXXXFV*NVPRRTFK-SSCNQRX 731
+PLNMILDDGGDLTNLVH KYP L ++G+ + + K + N
Sbjct: 125 QPLNMILDDGGDLTNLVHAKYPQYLAGIRGLSEETTTGVHNLAKMLAKGDLKVPAINVND 184
Query: 732 RXXXXXXXXXCMDVGSLCSTESXGTDIMIAGKVCVLAGYGDVGKDAPKRSKVW 890
SL TD+M+AGKV V+AGYGDVGK + K +
Sbjct: 185 SVTKSKFDNLYGIRESLPDGIKRATDVMLAGKVAVVAGYGDVGKGSAASLKAF 237
Score = 39.1 bits (87), Expect = 0.004
Identities = 19/28 (67%), Positives = 21/28 (75%)
Frame = +1
Query: 667 GVHNLYKMFREGLLKVPAINVXXSVXKA 750
GVHNL KM +G LKVPAINV SV K+
Sbjct: 162 GVHNLAKMLAKGDLKVPAINVNDSVTKS 189
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +2
Query: 749 QFXNLYGCRESLLDGIK 799
+F NLYG RESL DGIK
Sbjct: 190 KFDNLYGIRESLPDGIK 206
>AF043699-5|AAB97565.1| 437|Caenorhabditis elegans Hypothetical
protein K02F2.2 protein.
Length = 437
Score = 266 bits (651), Expect = 2e-71
Identities = 132/233 (56%), Positives = 158/233 (67%), Gaps = 1/233 (0%)
Frame = +3
Query: 195 KPPYKIADEKLAEWGRKEIMLAEKEMPGLMACRRKYAPAKILKGARIAGSLHMTVQTAVL 374
KP YK+AD KLA++GRKEI+LAE EMPGLMA R KY P++ LKGARIAG LHMT+QTAVL
Sbjct: 5 KPAYKVADIKLADFGRKEIILAENEMPGLMAMRSKYGPSQPLKGARIAGCLHMTIQTAVL 64
Query: 375 IETLIELGAEVQWSSSNIYSTQDEAAAALVAVGIPIYAWKGETDDEYIWCIEQTLIFPDG 554
IETL LGAEVQWSS NI+STQD AAAA+ G+P+YAWKGETD+EY WCIEQT++F DG
Sbjct: 65 IETLTALGAEVQWSSCNIFSTQDHAAAAIAQTGVPVYAWKGETDEEYEWCIEQTIVFKDG 124
Query: 555 KPLNMILDDGGDLTNLVHTKYPDLLKDVKGIXXXXXXXXXXFV*NVPRRTFK-SSCNQRX 731
+PLNMILDDGGDLTNLVH KYP L ++G+ + + K + N
Sbjct: 125 QPLNMILDDGGDLTNLVHAKYPQYLAGIRGLSEETTTGVHNLAKMLAKGDLKVPAINVND 184
Query: 732 RXXXXXXXXXCMDVGSLCSTESXGTDIMIAGKVCVLAGYGDVGKDAPKRSKVW 890
SL TD+M+AGKV V+AGYGDVGK + K +
Sbjct: 185 SVTKSKFDNLYGIRESLPDGIKRATDVMLAGKVAVVAGYGDVGKGSAASLKAF 237
Score = 39.1 bits (87), Expect = 0.004
Identities = 19/28 (67%), Positives = 21/28 (75%)
Frame = +1
Query: 667 GVHNLYKMFREGLLKVPAINVXXSVXKA 750
GVHNL KM +G LKVPAINV SV K+
Sbjct: 162 GVHNLAKMLAKGDLKVPAINVNDSVTKS 189
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +2
Query: 749 QFXNLYGCRESLLDGIK 799
+F NLYG RESL DGIK
Sbjct: 190 KFDNLYGIRESLPDGIK 206
>AC006659-2|AAF39883.2| 977|Caenorhabditis elegans Hypothetical
protein H16O14.1 protein.
Length = 977
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = -2
Query: 458 CSCGLVLCTI-NVTAGPLYLCSQFY*SLNKNRCLYCHV*AAGYSGTFEYFSWSI 300
C CG+++ I N+TA Y +N L + + G+ F YF WS+
Sbjct: 442 CECGILIAVIENITALITQFFLMCYLGVNAACALQSLLKSPGWRPGFRYFHWSL 495
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,039,193
Number of Sequences: 27780
Number of extensions: 415931
Number of successful extensions: 904
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 858
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 904
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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