Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_G08
         (897 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    22   6.6  
AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced prot...    22   6.6  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    22   6.6  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    22   6.6  

>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = +1

Query: 820 PGKFVYWQVMVTLEKMRPSVQRFGG 894
           PG    W   + L  +R + + FGG
Sbjct: 218 PGNMGLWDQALALRWLRDNAEAFGG 242


>AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 87

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -2

Query: 380 LNKNRCLYCHV 348
           +N+NRC YC +
Sbjct: 66  INRNRCQYCRL 76


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = -2

Query: 380 LNKNRCLYCHV 348
           +N+NRC YC +
Sbjct: 115 INRNRCQYCRL 125


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 8/25 (32%), Positives = 12/25 (48%)
 Frame = +1

Query: 820 PGKFVYWQVMVTLEKMRPSVQRFGG 894
           PG    W   + L  +R + + FGG
Sbjct: 218 PGNMGLWDQALALRWLRDNAEAFGG 242


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 246,100
Number of Sequences: 438
Number of extensions: 5180
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29025360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)