Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_G04
         (782 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016446-1|AAC24166.1|   66|Caenorhabditis elegans Hypothetical ...    30   2.1  
Z81541-1|CAB04411.1| 1291|Caenorhabditis elegans Hypothetical pr...    28   6.6  
AF038615-6|AAB94146.1|  157|Caenorhabditis elegans Ground-like (...    28   6.6  
Z70312-3|CAA94385.1|  172|Caenorhabditis elegans Hypothetical pr...    28   8.7  

>AF016446-1|AAC24166.1|   66|Caenorhabditis elegans Hypothetical
           protein C02E7.7 protein.
          Length = 66

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 15/41 (36%), Positives = 15/41 (36%)
 Frame = +1

Query: 535 FFXPXGGGGXVFFFXXPPPXXKXXGGGXXXXXKXPPPPXPP 657
           F  P GGGG       PPP     GGG       PP    P
Sbjct: 17  FLFPSGGGGGCGCAPPPPPPACGCGGGGGGYAAPPPAYAAP 57


>Z81541-1|CAB04411.1| 1291|Caenorhabditis elegans Hypothetical
           protein F48F5.1 protein.
          Length = 1291

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 17/42 (40%), Positives = 22/42 (52%)
 Frame = -2

Query: 196 IFFXGXQKF*XGLFHPVKIXRDFKXQDLDKSTQFHNLXXGPN 71
           I+  G  K   G F  VK   + K   +DK+T F+NL  GPN
Sbjct: 127 IYGSGLLKGFSGEFQSVKKMIE-KAMSVDKTTSFNNLINGPN 167


>AF038615-6|AAB94146.1|  157|Caenorhabditis elegans Ground-like (grd
           related) protein19 protein.
          Length = 157

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 13/30 (43%), Positives = 14/30 (46%)
 Frame = -1

Query: 656 GGXGGGGXFXXXXXPPPXXFXXGGGXXKKK 567
           GG GGGG       PPP     G G  KK+
Sbjct: 34  GGGGGGGGCCAPPPPPPVCGGCGCGGRKKR 63


>Z70312-3|CAA94385.1|  172|Caenorhabditis elegans Hypothetical
           protein ZC168.5 protein.
          Length = 172

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +1

Query: 583 PPPXXKXXGGGXXXXXKXPPPPXPPXF 663
           PPP     GGG     + PPPP PP +
Sbjct: 40  PPPPPPPCGGGY----EAPPPPPPPSY 62


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,395,346
Number of Sequences: 27780
Number of extensions: 270804
Number of successful extensions: 1230
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 459
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1047
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)