Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP27_F_G02
(954 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8 pr... 179 2e-44
BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8 pr... 179 2e-44
BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8 pr... 179 2e-44
Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8 prot... 178 2e-44
CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein. 178 2e-44
BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8 pr... 178 2e-44
BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8 pr... 178 2e-44
AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8 pr... 178 2e-44
AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8 pr... 178 2e-44
BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein. 134 4e-31
BC020212-1|AAH20212.1| 305|Homo sapiens mitochondrial ribosomal... 32 3.5
BC013685-1|AAH13685.1| 305|Homo sapiens mitochondrial ribosomal... 32 3.5
AF132956-1|AAD27731.1| 353|Homo sapiens CGI-22 protein protein. 32 3.5
>BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 179 bits (435), Expect = 2e-44
Identities = 81/112 (72%), Positives = 93/112 (83%)
Frame = +2
Query: 149 SHTKKRKGAPKLRSLDYAERHGYIXGVVKDIIHDPGRGAPLAVVHFRDPYKFXTRKELFI 328
+H K RKGA +LR++D+AERHGYI G+VKDIIHDPGRGAPLA V FRDPY+F R ELFI
Sbjct: 18 AHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFI 77
Query: 329 APEWLYTGQFVYCGXKATLEVGNVMPVGAMPEGTXVCNLEDXMGDRGRLARA 484
A E ++TGQFVYCG KA L VGNV+PVG MPEGT VC LE+ GDRG+LARA
Sbjct: 78 AAEGIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKPGDRGKLARA 129
Score = 33.9 bits (74), Expect = 0.88
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +1
Query: 97 MGRVIRAQRKGAGSVF 144
MGRVIR QRKGAGSVF
Sbjct: 1 MGRVIRGQRKGAGSVF 16
>BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 179 bits (435), Expect = 2e-44
Identities = 81/112 (72%), Positives = 93/112 (83%)
Frame = +2
Query: 149 SHTKKRKGAPKLRSLDYAERHGYIXGVVKDIIHDPGRGAPLAVVHFRDPYKFXTRKELFI 328
+H K RKGA +LR++D+AERHGYI G+VKDIIHDPGRGAPLA V FRDPY+F R ELFI
Sbjct: 18 AHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFI 77
Query: 329 APEWLYTGQFVYCGXKATLEVGNVMPVGAMPEGTXVCNLEDXMGDRGRLARA 484
A E ++TGQFVYCG KA L VGNV+PVG MPEGT VC LE+ GDRG+LARA
Sbjct: 78 AAEGIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKPGDRGKLARA 129
Score = 33.9 bits (74), Expect = 0.88
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +1
Query: 97 MGRVIRAQRKGAGSVF 144
MGRVIR QRKGAGSVF
Sbjct: 1 MGRVIRGQRKGAGSVF 16
>BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 179 bits (435), Expect = 2e-44
Identities = 81/112 (72%), Positives = 93/112 (83%)
Frame = +2
Query: 149 SHTKKRKGAPKLRSLDYAERHGYIXGVVKDIIHDPGRGAPLAVVHFRDPYKFXTRKELFI 328
+H K RKGA +LR++D+AERHGYI G+VKDIIHDPGRGAPLA V FRDPY+F R ELFI
Sbjct: 18 AHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFI 77
Query: 329 APEWLYTGQFVYCGXKATLEVGNVMPVGAMPEGTXVCNLEDXMGDRGRLARA 484
A E ++TGQFVYCG KA L VGNV+PVG MPEGT VC LE+ GDRG+LARA
Sbjct: 78 AAEGIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKPGDRGKLARA 129
Score = 33.9 bits (74), Expect = 0.88
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +1
Query: 97 MGRVIRAQRKGAGSVF 144
MGRVIR QRKGAGSVF
Sbjct: 1 MGRVIRGQRKGAGSVF 16
>Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 178 bits (434), Expect = 2e-44
Identities = 80/112 (71%), Positives = 93/112 (83%)
Frame = +2
Query: 149 SHTKKRKGAPKLRSLDYAERHGYIXGVVKDIIHDPGRGAPLAVVHFRDPYKFXTRKELFI 328
+H K RKGA +LR++D+AERHGYI G+VKDIIHDPGRGAPLA V FRDPY+F R ELFI
Sbjct: 18 AHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFI 77
Query: 329 APEWLYTGQFVYCGXKATLEVGNVMPVGAMPEGTXVCNLEDXMGDRGRLARA 484
A E ++TGQFVYCG KA L +GNV+PVG MPEGT VC LE+ GDRG+LARA
Sbjct: 78 AAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARA 129
Score = 33.9 bits (74), Expect = 0.88
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +1
Query: 97 MGRVIRAQRKGAGSVF 144
MGRVIR QRKGAGSVF
Sbjct: 1 MGRVIRGQRKGAGSVF 16
>CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein.
Length = 257
Score = 178 bits (434), Expect = 2e-44
Identities = 80/112 (71%), Positives = 93/112 (83%)
Frame = +2
Query: 149 SHTKKRKGAPKLRSLDYAERHGYIXGVVKDIIHDPGRGAPLAVVHFRDPYKFXTRKELFI 328
+H K RKGA +LR++D+AERHGYI G+VKDIIHDPGRGAPLA V FRDPY+F R ELFI
Sbjct: 18 AHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFI 77
Query: 329 APEWLYTGQFVYCGXKATLEVGNVMPVGAMPEGTXVCNLEDXMGDRGRLARA 484
A E ++TGQFVYCG KA L +GNV+PVG MPEGT VC LE+ GDRG+LARA
Sbjct: 78 AAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARA 129
Score = 33.9 bits (74), Expect = 0.88
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +1
Query: 97 MGRVIRAQRKGAGSVF 144
MGRVIR QRKGAGSVF
Sbjct: 1 MGRVIRGQRKGAGSVF 16
>BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 178 bits (434), Expect = 2e-44
Identities = 80/112 (71%), Positives = 93/112 (83%)
Frame = +2
Query: 149 SHTKKRKGAPKLRSLDYAERHGYIXGVVKDIIHDPGRGAPLAVVHFRDPYKFXTRKELFI 328
+H K RKGA +LR++D+AERHGYI G+VKDIIHDPGRGAPLA V FRDPY+F R ELFI
Sbjct: 18 AHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFI 77
Query: 329 APEWLYTGQFVYCGXKATLEVGNVMPVGAMPEGTXVCNLEDXMGDRGRLARA 484
A E ++TGQFVYCG KA L +GNV+PVG MPEGT VC LE+ GDRG+LARA
Sbjct: 78 AAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARA 129
Score = 33.9 bits (74), Expect = 0.88
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +1
Query: 97 MGRVIRAQRKGAGSVF 144
MGRVIR QRKGAGSVF
Sbjct: 1 MGRVIRGQRKGAGSVF 16
>BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 178 bits (434), Expect = 2e-44
Identities = 80/112 (71%), Positives = 93/112 (83%)
Frame = +2
Query: 149 SHTKKRKGAPKLRSLDYAERHGYIXGVVKDIIHDPGRGAPLAVVHFRDPYKFXTRKELFI 328
+H K RKGA +LR++D+AERHGYI G+VKDIIHDPGRGAPLA V FRDPY+F R ELFI
Sbjct: 18 AHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFI 77
Query: 329 APEWLYTGQFVYCGXKATLEVGNVMPVGAMPEGTXVCNLEDXMGDRGRLARA 484
A E ++TGQFVYCG KA L +GNV+PVG MPEGT VC LE+ GDRG+LARA
Sbjct: 78 AAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARA 129
Score = 33.9 bits (74), Expect = 0.88
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +1
Query: 97 MGRVIRAQRKGAGSVF 144
MGRVIR QRKGAGSVF
Sbjct: 1 MGRVIRGQRKGAGSVF 16
>AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 178 bits (434), Expect = 2e-44
Identities = 80/112 (71%), Positives = 93/112 (83%)
Frame = +2
Query: 149 SHTKKRKGAPKLRSLDYAERHGYIXGVVKDIIHDPGRGAPLAVVHFRDPYKFXTRKELFI 328
+H K RKGA +LR++D+AERHGYI G+VKDIIHDPGRGAPLA V FRDPY+F R ELFI
Sbjct: 18 AHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFI 77
Query: 329 APEWLYTGQFVYCGXKATLEVGNVMPVGAMPEGTXVCNLEDXMGDRGRLARA 484
A E ++TGQFVYCG KA L +GNV+PVG MPEGT VC LE+ GDRG+LARA
Sbjct: 78 AAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARA 129
Score = 33.9 bits (74), Expect = 0.88
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = +1
Query: 97 MGRVIRAQRKGAGSVF 144
MGRVIR QRKGAGSVF
Sbjct: 1 MGRVIRGQRKGAGSVF 16
>AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8
protein.
Length = 130
Score = 178 bits (434), Expect = 2e-44
Identities = 80/112 (71%), Positives = 93/112 (83%)
Frame = +2
Query: 149 SHTKKRKGAPKLRSLDYAERHGYIXGVVKDIIHDPGRGAPLAVVHFRDPYKFXTRKELFI 328
+H K RKGA +LR++D+AERHGYI G+VKDIIHDPGRGAPLA V FRDPY+F R ELFI
Sbjct: 14 AHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFI 73
Query: 329 APEWLYTGQFVYCGXKATLEVGNVMPVGAMPEGTXVCNLEDXMGDRGRLARA 484
A E ++TGQFVYCG KA L +GNV+PVG MPEGT VC LE+ GDRG+LARA
Sbjct: 74 AAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARA 125
>BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein.
Length = 211
Score = 134 bits (324), Expect = 4e-31
Identities = 61/83 (73%), Positives = 68/83 (81%)
Frame = +2
Query: 236 DIIHDPGRGAPLAVVHFRDPYKFXTRKELFIAPEWLYTGQFVYCGXKATLEVGNVMPVGA 415
DIIHDPGRGAPLA V FRDPY+F R ELFIA E ++TGQFVYCG KA L +GNV+PVG
Sbjct: 1 DIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGT 60
Query: 416 MPEGTXVCNLEDXMGDRGRLARA 484
MPEGT VC LE+ GDRG+LARA
Sbjct: 61 MPEGTIVCCLEEKPGDRGKLARA 83
>BC020212-1|AAH20212.1| 305|Homo sapiens mitochondrial ribosomal
protein L2 protein.
Length = 305
Score = 31.9 bits (69), Expect = 3.5
Identities = 31/116 (26%), Positives = 49/116 (42%), Gaps = 5/116 (4%)
Frame = +2
Query: 152 HTKKRKGAPKLRSLDYAERHGYIXGVVKDIIHDPGRGAPLAVVHFRDPYKFXTRKELFIA 331
H ++ + LR + G V + +DP R A +A+V +RK IA
Sbjct: 100 HKQRYRMIDFLRFRPEETKSGPFEEKVIQVRYDPCRSADIALV------AGGSRKRWIIA 153
Query: 332 PEWLYTGQFV----YCGXKATL-EVGNVMPVGAMPEGTXVCNLEDXMGDRGRLARA 484
E + G + + G A G+ P+GA+P GT + N+E G + RA
Sbjct: 154 TENMQAGDTILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRA 209
>BC013685-1|AAH13685.1| 305|Homo sapiens mitochondrial ribosomal
protein L2 protein.
Length = 305
Score = 31.9 bits (69), Expect = 3.5
Identities = 31/116 (26%), Positives = 49/116 (42%), Gaps = 5/116 (4%)
Frame = +2
Query: 152 HTKKRKGAPKLRSLDYAERHGYIXGVVKDIIHDPGRGAPLAVVHFRDPYKFXTRKELFIA 331
H ++ + LR + G V + +DP R A +A+V +RK IA
Sbjct: 100 HKQRYRMIDFLRFRPEETKSGPFEEKVIQVRYDPCRSADIALV------AGGSRKRWIIA 153
Query: 332 PEWLYTGQFV----YCGXKATL-EVGNVMPVGAMPEGTXVCNLEDXMGDRGRLARA 484
E + G + + G A G+ P+GA+P GT + N+E G + RA
Sbjct: 154 TENMQAGDTILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRA 209
>AF132956-1|AAD27731.1| 353|Homo sapiens CGI-22 protein protein.
Length = 353
Score = 31.9 bits (69), Expect = 3.5
Identities = 31/116 (26%), Positives = 49/116 (42%), Gaps = 5/116 (4%)
Frame = +2
Query: 152 HTKKRKGAPKLRSLDYAERHGYIXGVVKDIIHDPGRGAPLAVVHFRDPYKFXTRKELFIA 331
H ++ + LR + G V + +DP R A +A+V +RK IA
Sbjct: 100 HKQRYRMIDFLRFRPEETKSGPFEEKVIQVRYDPCRSADIALV------AGGSRKRWIIA 153
Query: 332 PEWLYTGQFV----YCGXKATL-EVGNVMPVGAMPEGTXVCNLEDXMGDRGRLARA 484
E + G + + G A G+ P+GA+P GT + N+E G + RA
Sbjct: 154 TENMQAGDTILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRA 209
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,271,953
Number of Sequences: 237096
Number of extensions: 2051023
Number of successful extensions: 2679
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2679
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12603135794
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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