Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_G02
         (954 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT014913-1|AAT47764.1|  256|Drosophila melanogaster RH21963p pro...   196   4e-50
AY071342-1|AAL48964.1|  256|Drosophila melanogaster RE37829p pro...   196   4e-50
AF098520-1|AAF06828.1|  256|Drosophila melanogaster ribosomal pr...   196   4e-50
AE014296-477|AAF47660.1|  256|Drosophila melanogaster CG1263-PB,...   196   4e-50
AE014296-476|AAF47659.1|  256|Drosophila melanogaster CG1263-PA,...   196   4e-50
BT022891-1|AAY55307.1|  579|Drosophila melanogaster IP12501p pro...   151   1e-36
AY113486-1|AAM29491.1|  294|Drosophila melanogaster RE45450p pro...    34   0.25 
AE014296-1910|AAF50091.1|  294|Drosophila melanogaster CG7636-PA...    34   0.25 

>BT014913-1|AAT47764.1|  256|Drosophila melanogaster RH21963p
           protein.
          Length = 256

 Score =  196 bits (478), Expect = 4e-50
 Identities = 87/111 (78%), Positives = 98/111 (88%)
 Frame = +2

Query: 149 SHTKKRKGAPKLRSLDYAERHGYIXGVVKDIIHDPGRGAPLAVVHFRDPYKFXTRKELFI 328
           +H KKRKGA KLRSLD+AER GYI GVVKDIIHDPGRGAPLAVVHFRDPY++  RKELFI
Sbjct: 18  AHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAVVHFRDPYRYKIRKELFI 77

Query: 329 APEWLYTGQFVYCGXKATLEVGNVMPVGAMPEGTXVCNLEDXMGDRGRLAR 481
           APE ++TGQFVYCG KATL++GNVMP+  MPEGT +CNLE+  GDRGRLAR
Sbjct: 78  APEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKTGDRGRLAR 128



 Score = 35.5 bits (78), Expect = 0.11
 Identities = 16/16 (100%), Positives = 16/16 (100%)
 Frame = +1

Query: 97  MGRVIRAQRKGAGSVF 144
           MGRVIRAQRKGAGSVF
Sbjct: 1   MGRVIRAQRKGAGSVF 16


>AY071342-1|AAL48964.1|  256|Drosophila melanogaster RE37829p
           protein.
          Length = 256

 Score =  196 bits (478), Expect = 4e-50
 Identities = 87/111 (78%), Positives = 98/111 (88%)
 Frame = +2

Query: 149 SHTKKRKGAPKLRSLDYAERHGYIXGVVKDIIHDPGRGAPLAVVHFRDPYKFXTRKELFI 328
           +H KKRKGA KLRSLD+AER GYI GVVKDIIHDPGRGAPLAVVHFRDPY++  RKELFI
Sbjct: 18  AHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAVVHFRDPYRYKIRKELFI 77

Query: 329 APEWLYTGQFVYCGXKATLEVGNVMPVGAMPEGTXVCNLEDXMGDRGRLAR 481
           APE ++TGQFVYCG KATL++GNVMP+  MPEGT +CNLE+  GDRGRLAR
Sbjct: 78  APEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKTGDRGRLAR 128



 Score = 35.5 bits (78), Expect = 0.11
 Identities = 16/16 (100%), Positives = 16/16 (100%)
 Frame = +1

Query: 97  MGRVIRAQRKGAGSVF 144
           MGRVIRAQRKGAGSVF
Sbjct: 1   MGRVIRAQRKGAGSVF 16


>AF098520-1|AAF06828.1|  256|Drosophila melanogaster ribosomal
           protein L8 protein.
          Length = 256

 Score =  196 bits (478), Expect = 4e-50
 Identities = 87/111 (78%), Positives = 98/111 (88%)
 Frame = +2

Query: 149 SHTKKRKGAPKLRSLDYAERHGYIXGVVKDIIHDPGRGAPLAVVHFRDPYKFXTRKELFI 328
           +H KKRKGA KLRSLD+AER GYI GVVKDIIHDPGRGAPLAVVHFRDPY++  RKELFI
Sbjct: 18  AHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAVVHFRDPYRYKIRKELFI 77

Query: 329 APEWLYTGQFVYCGXKATLEVGNVMPVGAMPEGTXVCNLEDXMGDRGRLAR 481
           APE ++TGQFVYCG KATL++GNVMP+  MPEGT +CNLE+  GDRGRLAR
Sbjct: 78  APEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKTGDRGRLAR 128



 Score = 35.5 bits (78), Expect = 0.11
 Identities = 16/16 (100%), Positives = 16/16 (100%)
 Frame = +1

Query: 97  MGRVIRAQRKGAGSVF 144
           MGRVIRAQRKGAGSVF
Sbjct: 1   MGRVIRAQRKGAGSVF 16


>AE014296-477|AAF47660.1|  256|Drosophila melanogaster CG1263-PB,
           isoform B protein.
          Length = 256

 Score =  196 bits (478), Expect = 4e-50
 Identities = 87/111 (78%), Positives = 98/111 (88%)
 Frame = +2

Query: 149 SHTKKRKGAPKLRSLDYAERHGYIXGVVKDIIHDPGRGAPLAVVHFRDPYKFXTRKELFI 328
           +H KKRKGA KLRSLD+AER GYI GVVKDIIHDPGRGAPLAVVHFRDPY++  RKELFI
Sbjct: 18  AHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAVVHFRDPYRYKIRKELFI 77

Query: 329 APEWLYTGQFVYCGXKATLEVGNVMPVGAMPEGTXVCNLEDXMGDRGRLAR 481
           APE ++TGQFVYCG KATL++GNVMP+  MPEGT +CNLE+  GDRGRLAR
Sbjct: 78  APEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKTGDRGRLAR 128



 Score = 35.5 bits (78), Expect = 0.11
 Identities = 16/16 (100%), Positives = 16/16 (100%)
 Frame = +1

Query: 97  MGRVIRAQRKGAGSVF 144
           MGRVIRAQRKGAGSVF
Sbjct: 1   MGRVIRAQRKGAGSVF 16


>AE014296-476|AAF47659.1|  256|Drosophila melanogaster CG1263-PA,
           isoform A protein.
          Length = 256

 Score =  196 bits (478), Expect = 4e-50
 Identities = 87/111 (78%), Positives = 98/111 (88%)
 Frame = +2

Query: 149 SHTKKRKGAPKLRSLDYAERHGYIXGVVKDIIHDPGRGAPLAVVHFRDPYKFXTRKELFI 328
           +H KKRKGA KLRSLD+AER GYI GVVKDIIHDPGRGAPLAVVHFRDPY++  RKELFI
Sbjct: 18  AHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAVVHFRDPYRYKIRKELFI 77

Query: 329 APEWLYTGQFVYCGXKATLEVGNVMPVGAMPEGTXVCNLEDXMGDRGRLAR 481
           APE ++TGQFVYCG KATL++GNVMP+  MPEGT +CNLE+  GDRGRLAR
Sbjct: 78  APEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNLEEKTGDRGRLAR 128



 Score = 35.5 bits (78), Expect = 0.11
 Identities = 16/16 (100%), Positives = 16/16 (100%)
 Frame = +1

Query: 97  MGRVIRAQRKGAGSVF 144
           MGRVIRAQRKGAGSVF
Sbjct: 1   MGRVIRAQRKGAGSVF 16


>BT022891-1|AAY55307.1|  579|Drosophila melanogaster IP12501p
           protein.
          Length = 579

 Score =  151 bits (366), Expect = 1e-36
 Identities = 65/83 (78%), Positives = 74/83 (89%)
 Frame = +2

Query: 233 KDIIHDPGRGAPLAVVHFRDPYKFXTRKELFIAPEWLYTGQFVYCGXKATLEVGNVMPVG 412
           KDIIHDPGRGAPLAVVHFRDPY++  RKELFIAPE ++TGQFVYCG KATL++GNVMP+ 
Sbjct: 1   KDIIHDPGRGAPLAVVHFRDPYRYKIRKELFIAPEGMHTGQFVYCGRKATLQIGNVMPLS 60

Query: 413 AMPEGTXVCNLEDXMGDRGRLAR 481
            MPEGT +CNLE+  GDRGRLAR
Sbjct: 61  QMPEGTIICNLEEKTGDRGRLAR 83


>AY113486-1|AAM29491.1|  294|Drosophila melanogaster RE45450p
           protein.
          Length = 294

 Score = 34.3 bits (75), Expect = 0.25
 Identities = 26/86 (30%), Positives = 40/86 (46%)
 Frame = +2

Query: 227 VVKDIIHDPGRGAPLAVVHFRDPYKFXTRKELFIAPEWLYTGQFVYCGXKATLEVGNVMP 406
           +V +++ D  R A +A+V   D  K+    E   A + L T +F+        E G+  P
Sbjct: 107 LVLEVLRDGCRTAKVALVAVGDELKYILATENMKAGDILKTSRFIPRIPVRPNE-GDAYP 165

Query: 407 VGAMPEGTXVCNLEDXMGDRGRLARA 484
           +GA+P GT +  LE   G    L  A
Sbjct: 166 LGALPVGTRIHCLEKNPGQMCHLIHA 191


>AE014296-1910|AAF50091.1|  294|Drosophila melanogaster CG7636-PA
           protein.
          Length = 294

 Score = 34.3 bits (75), Expect = 0.25
 Identities = 26/86 (30%), Positives = 40/86 (46%)
 Frame = +2

Query: 227 VVKDIIHDPGRGAPLAVVHFRDPYKFXTRKELFIAPEWLYTGQFVYCGXKATLEVGNVMP 406
           +V +++ D  R A +A+V   D  K+    E   A + L T +F+        E G+  P
Sbjct: 107 LVLEVLRDGCRTAKVALVAVGDELKYILATENMKAGDILKTSRFIPRIPVRPNE-GDAYP 165

Query: 407 VGAMPEGTXVCNLEDXMGDRGRLARA 484
           +GA+P GT +  LE   G    L  A
Sbjct: 166 LGALPVGTRIHCLEKNPGQMCHLIHA 191


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,607,557
Number of Sequences: 53049
Number of extensions: 580494
Number of successful extensions: 997
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 964
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 997
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4751175096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)