Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_F21
         (1062 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    25   0.89 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   2.9  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    24   8.8  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    24   8.8  

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 24.6 bits (51), Expect = 5.0
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -2

Query: 50  GXXXXPPPPPPP 15
           G    PPPPPPP
Sbjct: 779 GIGSPPPPPPPP 790



 Score = 23.8 bits (49), Expect = 8.8
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = -2

Query: 35  PPPPPPP 15
           PPPPPPP
Sbjct: 785 PPPPPPP 791



 Score = 22.6 bits (46), Expect(2) = 0.89
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 52  EGXXXXPPPPPP 17
           +G    PPPPPP
Sbjct: 778 DGIGSPPPPPPP 789



 Score = 22.6 bits (46), Expect(2) = 0.89
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -3

Query: 34  PPPPPPRXP 8
           PPPPPP  P
Sbjct: 783 PPPPPPPPP 791


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.4 bits (53), Expect = 2.9
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = -2

Query: 59  LXGGXXXXPPPPPP 18
           L GG    PPPPPP
Sbjct: 523 LTGGPLGPPPPPPP 536



 Score = 24.6 bits (51), Expect = 5.0
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -2

Query: 50  GXXXXPPPPPPP 15
           G    PPPPPPP
Sbjct: 525 GGPLGPPPPPPP 536


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1977

 Score = 23.8 bits (49), Expect = 8.8
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = +2

Query: 17  GGGGGGGXXXSLH 55
           GGGGGGG    LH
Sbjct: 948 GGGGGGGGGGFLH 960


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1978

 Score = 23.8 bits (49), Expect = 8.8
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = +2

Query: 17  GGGGGGGXXXSLH 55
           GGGGGGG    LH
Sbjct: 946 GGGGGGGGGGFLH 958


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 317,930
Number of Sequences: 2352
Number of extensions: 3739
Number of successful extensions: 264
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 117
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 118396512
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)