Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_F16
         (862 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_02_0263 - 8400488-8400913,8401011-8401481,8401581-8401843,840...    30   2.7  
05_06_0120 + 25748882-25749297,25749411-25749600,25749682-257498...    29   4.8  

>02_02_0263 -
           8400488-8400913,8401011-8401481,8401581-8401843,
           8401964-8402225
          Length = 473

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 5/47 (10%)
 Frame = +1

Query: 646 KWSPDPKTNSAWKGQYNKLCSM-----CEHPERCDYXDEFSGYVGAL 771
           ++S  P+T+S W G    LC++      E+P R D  D  +G + +L
Sbjct: 264 QYSEKPQTSSRWNGLEENLCTIKTRLNIENPSRADSYDPRAGRITSL 310


>05_06_0120 +
           25748882-25749297,25749411-25749600,25749682-25749888,
           25750234-25750401,25751155-25751390,25751617-25751764
          Length = 454

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 11/20 (55%), Positives = 15/20 (75%), Gaps = 1/20 (5%)
 Frame = +1

Query: 283 FSRGKPI-SFQLTPKTCTWP 339
           +SRGKP+ S  L P++C WP
Sbjct: 273 YSRGKPLLSATLAPRSCDWP 292


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,289,374
Number of Sequences: 37544
Number of extensions: 540873
Number of successful extensions: 1260
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1227
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1259
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2409218220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)