Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_F12
         (898 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC009764-1|AAH09764.1|  212|Homo sapiens mitochondrial ribosomal...    44   6e-04
AF151876-1|AAD34113.1|  212|Homo sapiens CGI-118 protein protein.      44   6e-04
BC036501-1|AAH36501.1|  113|Homo sapiens MRPL48 protein protein.       31   7.5  
X90568-1|CAA62188.1|26926|Homo sapiens titin protein.                  30   9.9  
AK129856-1|BAC85243.1|  295|Homo sapiens protein ( Homo sapiens ...    30   9.9  
AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.                30   9.9  
AJ277892-1|CAD12455.1|26926|Homo sapiens N2B-Titin Isoform protein.    30   9.9  

>BC009764-1|AAH09764.1|  212|Homo sapiens mitochondrial ribosomal
           protein L48 protein.
          Length = 212

 Score = 44.4 bits (100), Expect = 6e-04
 Identities = 22/95 (23%), Positives = 45/95 (47%)
 Frame = +1

Query: 394 YDCLNLQLKGYDYAILEACQSQIHRYAEVMGLQVEDCWATPAQQLKVQRFKPGSTALDAE 573
           Y  LN+ L  YD  + E+    +H     + ++VE+ +A P + ++V + +   + +  +
Sbjct: 88  YGVLNIHLTAYDMTLAESYAQYVHNLCNSLSIKVEESYAMPTKTIEVLQLQDQGSKMLLD 147

Query: 574 YQLNIYERNVQVVDVPAWALGTLLRVSRGSFTGGM 678
             L  +ER VQ+  + A      L + + S   G+
Sbjct: 148 SVLTTHERVVQISGLSATFAEIFLEIIQSSLPEGV 182


>AF151876-1|AAD34113.1|  212|Homo sapiens CGI-118 protein protein.
          Length = 212

 Score = 44.4 bits (100), Expect = 6e-04
 Identities = 22/95 (23%), Positives = 45/95 (47%)
 Frame = +1

Query: 394 YDCLNLQLKGYDYAILEACQSQIHRYAEVMGLQVEDCWATPAQQLKVQRFKPGSTALDAE 573
           Y  LN+ L  YD  + E+    +H     + ++VE+ +A P + ++V + +   + +  +
Sbjct: 88  YGVLNIHLTAYDMTLAESYAQYVHNLCNSLSIKVEESYAMPTKTIEVLQLQDQGSKMLLD 147

Query: 574 YQLNIYERNVQVVDVPAWALGTLLRVSRGSFTGGM 678
             L  +ER VQ+  + A      L + + S   G+
Sbjct: 148 SVLTTHERVVQISGLSATFAEIFLEIIQSSLPEGV 182


>BC036501-1|AAH36501.1|  113|Homo sapiens MRPL48 protein protein.
          Length = 113

 Score = 30.7 bits (66), Expect = 7.5
 Identities = 16/81 (19%), Positives = 37/81 (45%)
 Frame = +1

Query: 436 ILEACQSQIHRYAEVMGLQVEDCWATPAQQLKVQRFKPGSTALDAEYQLNIYERNVQVVD 615
           + E+    +H     + ++VE+ +A P + ++V + +   + +  +  L  +ER VQ+  
Sbjct: 3   LAESYAQYVHNLCNSLSIKVEESYAMPTKTIEVLQLQDQGSKMLLDSVLTTHERVVQISG 62

Query: 616 VPAWALGTLLRVSRGSFTGGM 678
             A      L + + S   G+
Sbjct: 63  FSATFAEIFLEIIQSSLPEGV 83


>X90568-1|CAA62188.1|26926|Homo sapiens titin protein.
          Length = 26926

 Score = 30.3 bits (65), Expect = 9.9
 Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
 Frame = +1

Query: 454   SQIHRYAEVMGLQVEDCW--ATPAQQLKVQRFKPGSTALDAEYQLNIYERNVQVVDVPAW 627
             S+I  Y   + L  ED W   TP   LK   +       + EY++ IY  N + +  PA 
Sbjct: 15288 SEITGYMVEIALPEEDEWQIVTPPAGLKATSYTITGLTENQEYKIRIYAMNSEGLGEPAL 15347

Query: 628   ALGT 639
               GT
Sbjct: 15348 VPGT 15351


>AK129856-1|BAC85243.1|  295|Homo sapiens protein ( Homo sapiens
           cDNA FLJ26346 fis, clone HRT04038, highly similar to
           Homo sapiens titin (TTN), transcript variant N2-B. ).
          Length = 295

 Score = 30.3 bits (65), Expect = 9.9
 Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
 Frame = +1

Query: 454 SQIHRYAEVMGLQVEDCW--ATPAQQLKVQRFKPGSTALDAEYQLNIYERNVQVVDVPAW 627
           S+I  Y   + L  ED W   TP   LK   +       + EY++ IY  N + +  PA 
Sbjct: 156 SEITGYMVEIALPEEDEWQIVTPPAGLKATSYTITGLTENQEYKIRIYAMNSEGLGEPAL 215

Query: 628 ALGT 639
             GT
Sbjct: 216 VPGT 219


>AJ277892-2|CAD12456.1|30017|Homo sapiens Titin protein.
          Length = 30000

 Score = 30.3 bits (65), Expect = 9.9
 Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
 Frame = +1

Query: 454   SQIHRYAEVMGLQVEDCW--ATPAQQLKVQRFKPGSTALDAEYQLNIYERNVQVVDVPAW 627
             S+I  Y   + L  ED W   TP   LK   +       + EY++ IY  N + +  PA 
Sbjct: 22712 SEITGYMVEIALPEEDEWQIVTPPAGLKATSYTITGLTENQEYKIRIYAMNSEGLGEPAL 22771

Query: 628   ALGT 639
               GT
Sbjct: 22772 VPGT 22775


>AJ277892-1|CAD12455.1|26926|Homo sapiens N2B-Titin Isoform protein.
          Length = 26926

 Score = 30.3 bits (65), Expect = 9.9
 Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
 Frame = +1

Query: 454   SQIHRYAEVMGLQVEDCW--ATPAQQLKVQRFKPGSTALDAEYQLNIYERNVQVVDVPAW 627
             S+I  Y   + L  ED W   TP   LK   +       + EY++ IY  N + +  PA 
Sbjct: 15288 SEITGYMVEIALPEEDEWQIVTPPAGLKATSYTITGLTENQEYKIRIYAMNSEGLGEPAL 15347

Query: 628   ALGT 639
               GT
Sbjct: 15348 VPGT 15351


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,551,879
Number of Sequences: 237096
Number of extensions: 2060872
Number of successful extensions: 4021
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4021
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11548247776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)