Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP27_F_F07
(862 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M19722-1|AAA52451.1| 529|Homo sapiens FGR protein. 32 2.3
M12724-1|AAA52762.1| 306|Homo sapiens FGR protein. 32 2.3
BC064382-1|AAH64382.1| 529|Homo sapiens Gardner-Rasheed feline ... 32 2.3
AL031729-3|CAB62998.1| 529|Homo sapiens Gardner-Rasheed feline ... 32 2.3
AL031729-2|CAI19617.1| 313|Homo sapiens Gardner-Rasheed feline ... 32 2.3
S56138-1|AAA14245.1| 748|Homo sapiens choline acetyltransferase... 31 7.1
S45018-1|AAB23557.2| 559|Homo sapiens choline acetyltransferase... 31 7.1
BC130617-1|AAI30618.1| 630|Homo sapiens CHAT protein protein. 31 7.1
BC130615-1|AAI30616.1| 630|Homo sapiens CHAT protein protein. 31 7.1
AF305909-1|AAK08955.1| 630|Homo sapiens choline acetyltransfera... 31 7.1
AF305908-1|AAK08954.1| 666|Homo sapiens choline acetyltransfera... 31 7.1
AF305907-1|AAK08953.1| 748|Homo sapiens choline acetyltransfera... 31 7.1
AF305906-3|AAK08952.1| 630|Homo sapiens choline acetyltransfera... 31 7.1
AF305906-2|AAK08951.1| 666|Homo sapiens choline acetyltransfera... 31 7.1
AF305906-1|AAK08950.1| 748|Homo sapiens choline acetyltransfera... 31 7.1
>M19722-1|AAA52451.1| 529|Homo sapiens FGR protein.
Length = 529
Score = 32.3 bits (70), Expect = 2.3
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +3
Query: 186 LESAGNPQGATLVTSLGTNKWGEARSLALWDKTMMDSLE 302
L S GNPQGA L+ T K + S+ WD+T D ++
Sbjct: 158 LLSPGNPQGAFLIRESETTKGAYSLSIRDWDQTRGDHVK 196
>M12724-1|AAA52762.1| 306|Homo sapiens FGR protein.
Length = 306
Score = 32.3 bits (70), Expect = 2.3
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +3
Query: 186 LESAGNPQGATLVTSLGTNKWGEARSLALWDKTMMDSLE 302
L S GNPQGA L+ T K + S+ WD+T D ++
Sbjct: 48 LLSPGNPQGAFLIRESETTKGAYSLSIRDWDQTRGDHVK 86
>BC064382-1|AAH64382.1| 529|Homo sapiens Gardner-Rasheed feline
sarcoma viral (v-fgr) oncogene homolog protein.
Length = 529
Score = 32.3 bits (70), Expect = 2.3
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +3
Query: 186 LESAGNPQGATLVTSLGTNKWGEARSLALWDKTMMDSLE 302
L S GNPQGA L+ T K + S+ WD+T D ++
Sbjct: 158 LLSPGNPQGAFLIRESETTKGAYSLSIRDWDQTRGDHVK 196
>AL031729-3|CAB62998.1| 529|Homo sapiens Gardner-Rasheed feline
sarcoma viral (v-fgr) oncogene homolog protein.
Length = 529
Score = 32.3 bits (70), Expect = 2.3
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +3
Query: 186 LESAGNPQGATLVTSLGTNKWGEARSLALWDKTMMDSLE 302
L S GNPQGA L+ T K + S+ WD+T D ++
Sbjct: 158 LLSPGNPQGAFLIRESETTKGAYSLSIRDWDQTRGDHVK 196
>AL031729-2|CAI19617.1| 313|Homo sapiens Gardner-Rasheed feline
sarcoma viral (v-fgr) oncogene homolog protein.
Length = 313
Score = 32.3 bits (70), Expect = 2.3
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +3
Query: 186 LESAGNPQGATLVTSLGTNKWGEARSLALWDKTMMDSLE 302
L S GNPQGA L+ T K + S+ WD+T D ++
Sbjct: 158 LLSPGNPQGAFLIRESETTKGAYSLSIRDWDQTRGDHVK 196
>S56138-1|AAA14245.1| 748|Homo sapiens choline acetyltransferase
protein.
Length = 748
Score = 30.7 bits (66), Expect = 7.1
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +3
Query: 219 LVTSLGTNKWGEARSLALWDKTMMDSLEKL 308
L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 352 LLTSDGRSEWAEARTVLVKDSTNRDSLDMI 381
>S45018-1|AAB23557.2| 559|Homo sapiens choline acetyltransferase
protein.
Length = 559
Score = 30.7 bits (66), Expect = 7.1
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +3
Query: 219 LVTSLGTNKWGEARSLALWDKTMMDSLEKL 308
L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 242 LLTSDGRSEWAEARTVLVKDSTNRDSLDMI 271
>BC130617-1|AAI30618.1| 630|Homo sapiens CHAT protein protein.
Length = 630
Score = 30.7 bits (66), Expect = 7.1
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +3
Query: 219 LVTSLGTNKWGEARSLALWDKTMMDSLEKL 308
L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 234 LLTSDGRSEWAEARTVLVKDSTNRDSLDMI 263
>BC130615-1|AAI30616.1| 630|Homo sapiens CHAT protein protein.
Length = 630
Score = 30.7 bits (66), Expect = 7.1
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +3
Query: 219 LVTSLGTNKWGEARSLALWDKTMMDSLEKL 308
L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 234 LLTSDGRSEWAEARTVLVKDSTNRDSLDMI 263
>AF305909-1|AAK08955.1| 630|Homo sapiens choline acetyltransferase
isoform R protein.
Length = 630
Score = 30.7 bits (66), Expect = 7.1
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +3
Query: 219 LVTSLGTNKWGEARSLALWDKTMMDSLEKL 308
L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 234 LLTSDGRSEWAEARTVLVKDSTNRDSLDMI 263
>AF305908-1|AAK08954.1| 666|Homo sapiens choline acetyltransferase
isoform S protein.
Length = 666
Score = 30.7 bits (66), Expect = 7.1
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +3
Query: 219 LVTSLGTNKWGEARSLALWDKTMMDSLEKL 308
L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 270 LLTSDGRSEWAEARTVLVKDSTNRDSLDMI 299
>AF305907-1|AAK08953.1| 748|Homo sapiens choline acetyltransferase
isoform M protein.
Length = 748
Score = 30.7 bits (66), Expect = 7.1
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +3
Query: 219 LVTSLGTNKWGEARSLALWDKTMMDSLEKL 308
L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 352 LLTSDGRSEWAEARTVLVKDSTNRDSLDMI 381
>AF305906-3|AAK08952.1| 630|Homo sapiens choline acetyltransferase
isoform R protein.
Length = 630
Score = 30.7 bits (66), Expect = 7.1
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +3
Query: 219 LVTSLGTNKWGEARSLALWDKTMMDSLEKL 308
L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 234 LLTSDGRSEWAEARTVLVKDSTNRDSLDMI 263
>AF305906-2|AAK08951.1| 666|Homo sapiens choline acetyltransferase
isoform S protein.
Length = 666
Score = 30.7 bits (66), Expect = 7.1
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +3
Query: 219 LVTSLGTNKWGEARSLALWDKTMMDSLEKL 308
L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 270 LLTSDGRSEWAEARTVLVKDSTNRDSLDMI 299
>AF305906-1|AAK08950.1| 748|Homo sapiens choline acetyltransferase
isoform M protein.
Length = 748
Score = 30.7 bits (66), Expect = 7.1
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +3
Query: 219 LVTSLGTNKWGEARSLALWDKTMMDSLEKL 308
L+TS G ++W EAR++ + D T DSL+ +
Sbjct: 352 LLTSDGRSEWAEARTVLVKDSTNRDSLDMI 381
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,667,478
Number of Sequences: 237096
Number of extensions: 1693421
Number of successful extensions: 3277
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3240
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10984231046
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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