Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_F06
         (902 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U04520-2|AAC27816.1| 1685|Homo sapiens type IV collagen alpha 5 ...    30   10.0 
U04520-1|AAF66217.2| 1691|Homo sapiens type IV collagen alpha 5 ...    30   10.0 
M63473-1|AAA51558.1|  762|Homo sapiens alpha-5 type IV collagen ...    30   10.0 
M58526-1|AAA99480.1| 1604|Homo sapiens alpha-5 type IV collagen ...    30   10.0 
M31115-1|AAA52045.1|  772|Homo sapiens COL4A5 protein.                 30   10.0 
AL035425-1|CAB90289.2| 1685|Homo sapiens collagen type IV alpha ...    30   10.0 
AL034369-4|CAA22267.2| 1685|Homo sapiens collagen type IV alpha ...    30   10.0 
AL031622-1|CAI43038.1| 1685|Homo sapiens collagen type IV alpha ...    30   10.0 

>U04520-2|AAC27816.1| 1685|Homo sapiens type IV collagen alpha 5 chain
            protein.
          Length = 1685

 Score = 30.3 bits (65), Expect = 10.0
 Identities = 18/50 (36%), Positives = 19/50 (38%), Gaps = 1/50 (2%)
 Frame = -3

Query: 900  PDXXGXPNYPPLGGXKPXSPNPKXPGXXXFXGXGXXKRXPKXQ-NPLXPG 754
            P   G P  P  GG K    NP  PG     G    +  P  Q NP  PG
Sbjct: 1266 PGPEGPPGLPGNGGIKGEKGNPGQPGLPGLPGLKGDQGPPGLQGNPGRPG 1315


>U04520-1|AAF66217.2| 1691|Homo sapiens type IV collagen alpha 5 chain
            protein.
          Length = 1691

 Score = 30.3 bits (65), Expect = 10.0
 Identities = 18/50 (36%), Positives = 19/50 (38%), Gaps = 1/50 (2%)
 Frame = -3

Query: 900  PDXXGXPNYPPLGGXKPXSPNPKXPGXXXFXGXGXXKRXPKXQ-NPLXPG 754
            P   G P  P  GG K    NP  PG     G    +  P  Q NP  PG
Sbjct: 1272 PGPEGPPGLPGNGGIKGEKGNPGQPGLPGLPGLKGDQGPPGLQGNPGRPG 1321


>M63473-1|AAA51558.1|  762|Homo sapiens alpha-5 type IV collagen
           protein.
          Length = 762

 Score = 30.3 bits (65), Expect = 10.0
 Identities = 18/50 (36%), Positives = 19/50 (38%), Gaps = 1/50 (2%)
 Frame = -3

Query: 900 PDXXGXPNYPPLGGXKPXSPNPKXPGXXXFXGXGXXKRXPKXQ-NPLXPG 754
           P   G P  P  GG K    NP  PG     G    +  P  Q NP  PG
Sbjct: 343 PGPEGPPGLPGNGGIKGEKGNPGQPGLPGLPGLKGDQGPPGLQGNPGRPG 392


>M58526-1|AAA99480.1| 1604|Homo sapiens alpha-5 type IV collagen
            protein.
          Length = 1604

 Score = 30.3 bits (65), Expect = 10.0
 Identities = 18/50 (36%), Positives = 19/50 (38%), Gaps = 1/50 (2%)
 Frame = -3

Query: 900  PDXXGXPNYPPLGGXKPXSPNPKXPGXXXFXGXGXXKRXPKXQ-NPLXPG 754
            P   G P  P  GG K    NP  PG     G    +  P  Q NP  PG
Sbjct: 1185 PGPEGPPGLPGNGGIKGEKGNPGQPGLPGLPGLKGDQGPPGLQGNPGRPG 1234


>M31115-1|AAA52045.1|  772|Homo sapiens COL4A5 protein.
          Length = 772

 Score = 30.3 bits (65), Expect = 10.0
 Identities = 18/50 (36%), Positives = 19/50 (38%), Gaps = 1/50 (2%)
 Frame = -3

Query: 900 PDXXGXPNYPPLGGXKPXSPNPKXPGXXXFXGXGXXKRXPKXQ-NPLXPG 754
           P   G P  P  GG K    NP  PG     G    +  P  Q NP  PG
Sbjct: 353 PGPEGPPGLPGNGGIKGEKGNPGQPGLPGLPGLKGDQGPPGLQGNPGRPG 402


>AL035425-1|CAB90289.2| 1685|Homo sapiens collagen type IV alpha 5
            protein.
          Length = 1685

 Score = 30.3 bits (65), Expect = 10.0
 Identities = 18/50 (36%), Positives = 19/50 (38%), Gaps = 1/50 (2%)
 Frame = -3

Query: 900  PDXXGXPNYPPLGGXKPXSPNPKXPGXXXFXGXGXXKRXPKXQ-NPLXPG 754
            P   G P  P  GG K    NP  PG     G    +  P  Q NP  PG
Sbjct: 1266 PGPEGPPGLPGNGGIKGEKGNPGQPGLPGLPGLKGDQGPPGLQGNPGRPG 1315


>AL034369-4|CAA22267.2| 1685|Homo sapiens collagen type IV alpha 5
            protein.
          Length = 1685

 Score = 30.3 bits (65), Expect = 10.0
 Identities = 18/50 (36%), Positives = 19/50 (38%), Gaps = 1/50 (2%)
 Frame = -3

Query: 900  PDXXGXPNYPPLGGXKPXSPNPKXPGXXXFXGXGXXKRXPKXQ-NPLXPG 754
            P   G P  P  GG K    NP  PG     G    +  P  Q NP  PG
Sbjct: 1266 PGPEGPPGLPGNGGIKGEKGNPGQPGLPGLPGLKGDQGPPGLQGNPGRPG 1315


>AL031622-1|CAI43038.1| 1685|Homo sapiens collagen type IV alpha 5
            protein.
          Length = 1685

 Score = 30.3 bits (65), Expect = 10.0
 Identities = 18/50 (36%), Positives = 19/50 (38%), Gaps = 1/50 (2%)
 Frame = -3

Query: 900  PDXXGXPNYPPLGGXKPXSPNPKXPGXXXFXGXGXXKRXPKXQ-NPLXPG 754
            P   G P  P  GG K    NP  PG     G    +  P  Q NP  PG
Sbjct: 1266 PGPEGPPGLPGNGGIKGEKGNPGQPGLPGLPGLKGDQGPPGLQGNPGRPG 1315


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,706,551
Number of Sequences: 237096
Number of extensions: 1769796
Number of successful extensions: 3115
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2824
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3081
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11659288620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)