Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP27_F_F06
(902 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 35 0.069
U50311-12|AAA92315.1| 169|Caenorhabditis elegans Hypothetical p... 29 3.4
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 35.1 bits (77), Expect = 0.069
Identities = 21/64 (32%), Positives = 24/64 (37%)
Frame = -3
Query: 882 PNYPPLGGXKPXSPNPKXPGXXXFXGXGXXKRXPKXQNPLXPGGWXDFFKXXKNXPNXPP 703
PN P G P P+P P G P +P P G D K N PN P
Sbjct: 1009 PNGPSPNGPSPNGPSPNGPSPN---GPTPNWPSPNGPSPNGPNGPSDPNKPGPNGPNGPS 1065
Query: 702 EPXK 691
+P K
Sbjct: 1066 DPNK 1069
Score = 34.7 bits (76), Expect = 0.092
Identities = 21/65 (32%), Positives = 22/65 (33%), Gaps = 1/65 (1%)
Frame = -3
Query: 882 PNYPPLGGXKPXSPNPKXPGXXXFXGXGXX-KRXPKXQNPLXPGGWXDFFKXXKNXPNXP 706
PN P G P P P P G P P P G D K N PN P
Sbjct: 1019 PNGPSPNGPSPNGPTPNWPSPNGPSPNGPNGPSDPNKPGPNGPNGPSDPNKPGPNGPNEP 1078
Query: 705 PEPXK 691
+P K
Sbjct: 1079 SDPNK 1083
Score = 32.3 bits (70), Expect = 0.49
Identities = 24/71 (33%), Positives = 27/71 (38%), Gaps = 1/71 (1%)
Frame = -3
Query: 900 PDXXGXPNYP-PLGGXKPXSPNPKXPGXXXFXGXGXXKRXPKXQNPLXPGGWXDFFKXXK 724
P+ PN P P G +P PN PG G P P P G D K
Sbjct: 1299 PNGPSDPNKPGPNGPNEPSDPNK--PGPNGPNGPSD----PNKPGPNGPNGPSDPNKPGP 1352
Query: 723 NXPNXPPEPXK 691
N PN P +P K
Sbjct: 1353 NGPNEPSDPNK 1363
Score = 31.5 bits (68), Expect = 0.85
Identities = 24/71 (33%), Positives = 27/71 (38%), Gaps = 1/71 (1%)
Frame = -3
Query: 900 PDXXGXPNYP-PLGGXKPXSPNPKXPGXXXFXGXGXXKRXPKXQNPLXPGGWXDFFKXXK 724
P+ PN P P G +P PN PG G P P P G D K
Sbjct: 1243 PNGPSDPNKPGPNGPNEPSDPN--RPGPNGPNGP----LDPNKPGPNGPNGPSDPNKPGP 1296
Query: 723 NXPNXPPEPXK 691
N PN P +P K
Sbjct: 1297 NGPNGPSDPNK 1307
Score = 31.1 bits (67), Expect = 1.1
Identities = 24/71 (33%), Positives = 26/71 (36%), Gaps = 1/71 (1%)
Frame = -3
Query: 900 PDXXGXPNYP-PLGGXKPXSPNPKXPGXXXFXGXGXXKRXPKXQNPLXPGGWXDFFKXXK 724
P+ PN P P G P PN PG G P P P G D K
Sbjct: 1257 PNEPSDPNRPGPNGPNGPLDPNK--PGPNGPNGPSD----PNKPGPNGPNGPSDPNKPGP 1310
Query: 723 NXPNXPPEPXK 691
N PN P +P K
Sbjct: 1311 NGPNEPSDPNK 1321
Score = 30.7 bits (66), Expect = 1.5
Identities = 24/79 (30%), Positives = 27/79 (34%), Gaps = 9/79 (11%)
Frame = -3
Query: 900 PDXXGXPNYP-PLGGXKPXSPN------PKXPGXXXFXGXGXXKRX--PKXQNPLXPGGW 748
P+ PN P P G +P PN P P G P P P G
Sbjct: 1061 PNGPSDPNKPGPNGPNEPSDPNKPGPNGPNGPSDPNKPGPNGPNEPSDPNKPGPNGPNGP 1120
Query: 747 XDFFKXXKNXPNXPPEPXK 691
D K N PN P +P K
Sbjct: 1121 SDPNKPGPNGPNEPSDPNK 1139
Score = 30.7 bits (66), Expect = 1.5
Identities = 24/79 (30%), Positives = 27/79 (34%), Gaps = 9/79 (11%)
Frame = -3
Query: 900 PDXXGXPNYP-PLGGXKPXSPN------PKXPGXXXFXGXGXXKRX--PKXQNPLXPGGW 748
P+ PN P P G +P PN P P G P P P G
Sbjct: 1089 PNGPSDPNKPGPNGPNEPSDPNKPGPNGPNGPSDPNKPGPNGPNEPSDPNKPGPNGPNGP 1148
Query: 747 XDFFKXXKNXPNXPPEPXK 691
D K N PN P +P K
Sbjct: 1149 SDPNKPGPNGPNGPSDPNK 1167
Score = 30.3 bits (65), Expect = 2.0
Identities = 22/71 (30%), Positives = 24/71 (33%), Gaps = 1/71 (1%)
Frame = -3
Query: 900 PDXXGXPNYP-PLGGXKPXSPNPKXPGXXXFXGXGXXKRXPKXQNPLXPGGWXDFFKXXK 724
P+ PN P P G P PN P P P P G D K
Sbjct: 1047 PNGPSDPNKPGPNGPNGPSDPNKPGPNGPN------EPSDPNKPGPNGPNGPSDPNKPGP 1100
Query: 723 NXPNXPPEPXK 691
N PN P +P K
Sbjct: 1101 NGPNEPSDPNK 1111
Score = 30.3 bits (65), Expect = 2.0
Identities = 24/79 (30%), Positives = 26/79 (32%), Gaps = 9/79 (11%)
Frame = -3
Query: 900 PDXXGXPNYP-PLGGXKPXSPN------PKXPGXXXFXGXGXXKRX--PKXQNPLXPGGW 748
P+ PN P P G P PN P P G P P P G
Sbjct: 1215 PNEPSDPNKPGPNGSNGPSDPNKPGPNGPNGPSDPNKPGPNGPNEPSDPNRPGPNGPNGP 1274
Query: 747 XDFFKXXKNXPNXPPEPXK 691
D K N PN P +P K
Sbjct: 1275 LDPNKPGPNGPNGPSDPNK 1293
Score = 30.3 bits (65), Expect = 2.0
Identities = 22/71 (30%), Positives = 24/71 (33%), Gaps = 1/71 (1%)
Frame = -3
Query: 900 PDXXGXPNYP-PLGGXKPXSPNPKXPGXXXFXGXGXXKRXPKXQNPLXPGGWXDFFKXXK 724
P+ PN P P G P PN P P P P G D K
Sbjct: 1285 PNGPSDPNKPGPNGPNGPSDPNKPGPNGPN------EPSDPNKPGPNGPNGPSDPNKPGP 1338
Query: 723 NXPNXPPEPXK 691
N PN P +P K
Sbjct: 1339 NGPNGPSDPNK 1349
Score = 29.1 bits (62), Expect = 4.5
Identities = 23/71 (32%), Positives = 26/71 (36%), Gaps = 1/71 (1%)
Frame = -3
Query: 900 PDXXGXPNYP-PLGGXKPXSPNPKXPGXXXFXGXGXXKRXPKXQNPLXPGGWXDFFKXXK 724
P+ PN P P G +P PN PG G P P P G D K
Sbjct: 1117 PNGPSDPNKPGPNGPNEPSDPNK--PGPNGPNGPSD----PNKPGPNGPNGPSDPNKPGP 1170
Query: 723 NXPNXPPEPXK 691
N PN +P K
Sbjct: 1171 NGPNESSDPNK 1181
Score = 28.7 bits (61), Expect = 6.0
Identities = 22/70 (31%), Positives = 25/70 (35%)
Frame = -3
Query: 900 PDXXGXPNYPPLGGXKPXSPNPKXPGXXXFXGXGXXKRXPKXQNPLXPGGWXDFFKXXKN 721
P+ PN P G S +P PG G P P P G D K N
Sbjct: 1159 PNGPSDPNKPGPNGPNESS-DPNKPGPN---GPNEPS-DPNKPGPNGPNGPSDPNKPGPN 1213
Query: 720 XPNXPPEPXK 691
PN P +P K
Sbjct: 1214 GPNEPSDPNK 1223
Score = 28.3 bits (60), Expect = 7.9
Identities = 21/64 (32%), Positives = 25/64 (39%), Gaps = 3/64 (4%)
Frame = -3
Query: 873 PPLGGXKPX-SPNP-KXPGXXXFXGXGXX-KRXPKXQNPLXPGGWXDFFKXXKNXPNXPP 703
PP+ P PNP PG G K P +P P G D K + PN P
Sbjct: 927 PPIPVPNPIPKPNPGPGPGPPSPNGPSDPNKPSPNGPSPNGPNGPSDPNKPGPSGPNGPS 986
Query: 702 EPXK 691
+P K
Sbjct: 987 DPNK 990
>U50311-12|AAA92315.1| 169|Caenorhabditis elegans Hypothetical
protein C25E10.10 protein.
Length = 169
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 274 CDVPQCFCDRPNVRNTKTGKCVPESEC 354
C C C + VR++ TGKCV +++C
Sbjct: 105 CMTNVCQCKKGLVRDSATGKCVEKNKC 131
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,761,073
Number of Sequences: 27780
Number of extensions: 255804
Number of successful extensions: 595
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 578
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2297313942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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