Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_F02
         (923 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    27   0.21 
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    25   1.1  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   4.4  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   7.8  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   7.8  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   7.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   7.8  

>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 27.1 bits (57), Expect = 0.21
 Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 4/72 (5%)
 Frame = +2

Query: 212 KDKVIEEWSSYMEDIKLSSSWTNFLEDK--ENPSLEDPDVVLSVPAMITRRGYRCETHS- 382
           +DK++EE +  + DIK   ++ +  E K  E    E   +  SV  +  + G    THS 
Sbjct: 335 QDKIVEEMNEVLGDIKKKPTYQDLQEMKYLERCVKEVLRLYPSVHFISRKLGEDLVTHSG 394

Query: 383 -LISQGYVLNIH 415
             +++G ++N+H
Sbjct: 395 HKLAKGSIVNLH 406


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 4/72 (5%)
 Frame = +2

Query: 212 KDKVIEEWSSYMEDIKLSSSWTNFLEDK--ENPSLEDPDVVLSVPAMITRRGYRCETHS- 382
           +DK++EE +  + DIK   ++ +  E K  E    E   +  SV  +  + G    THS 
Sbjct: 335 QDKIVEEMNEVLGDIKKKPTYQDLQEMKYLERCVKEVLRLYPSVHFISRKLGEDLVTHSG 394

Query: 383 -LISQGYVLNIH 415
             +++  ++N+H
Sbjct: 395 HKLAKASIVNLH 406


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 12/23 (52%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
 Frame = -2

Query: 166 GFSSF--RTNQTLGSETRASATK 104
           G+ S+  RT   L  ETR SATK
Sbjct: 195 GYKSYQCRTKHRLTGETRLSATK 217


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 513 PFRTQSAELANKPC*SITV 457
           P + +S  +AN+ C  ITV
Sbjct: 49  PIKEESGSMANQKCLEITV 67


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 513 PFRTQSAELANKPC*SITV 457
           P + +S  +AN+ C  ITV
Sbjct: 49  PIKEESGSMANQKCLEITV 67


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 513 PFRTQSAELANKPC*SITV 457
           P + +S  +AN+ C  ITV
Sbjct: 49  PIKEESGSMANQKCLEITV 67


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 513 PFRTQSAELANKPC*SITV 457
           P + +S  +AN+ C  ITV
Sbjct: 49  PIKEESGSMANQKCLEITV 67


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,436
Number of Sequences: 336
Number of extensions: 3253
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25858250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)