Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP27_F_F02
         (923 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    23   3.9  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    23   5.2  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    22   6.8  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    22   6.8  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   9.0  

>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 7/22 (31%), Positives = 14/22 (63%)
 Frame = +2

Query: 269 SWTNFLEDKENPSLEDPDVVLS 334
           SW N +++  N +  DP ++L+
Sbjct: 270 SWRNLMDEHSNRTNSDPRMILT 291


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.6 bits (46), Expect = 5.2
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +1

Query: 463 DTSARLVCELCRLG 504
           DT+ R+VC+ C +G
Sbjct: 349 DTTYRVVCDACSMG 362


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 649 GTRSPHHDIPGHXKXISXR 705
           G R PH+DI G+   ++ R
Sbjct: 909 GARKPHYDIWGNTVNVASR 927


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +1

Query: 631 NIXISRGTRSPHHDIPGHXKXISXRGR 711
           ++ +  G R    D PGH   IS R R
Sbjct: 186 DVTLESGERVTFLDTPGHAAFISMRHR 212


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 9.0
 Identities = 14/52 (26%), Positives = 18/52 (34%), Gaps = 1/52 (1%)
 Frame = +2

Query: 149 SEAREASXNNFEDARNYIETQKDKVIE-EWSSYMEDIKLSSSWTNFLEDKEN 301
           S   E    N    + Y+   +   I  EW        LSS W +   DK N
Sbjct: 158 SNGEEVCLENCTGYQQYLRLLEVPQINLEWGEGSSGDDLSSEWDSDYTDKSN 209


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,413
Number of Sequences: 438
Number of extensions: 4004
Number of successful extensions: 14
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30113811
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)